RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 GNG4P50150 75 aa11.16□□□□□ -0.62
PRPF38B-202ENST00000370022 ANKRD39Q53RE8 183 aa11.16□□□□□ -0.62
PRPF38B-202ENST00000370022 CENPWQ5EE01 88 aa11.16□□□□□ -0.62
PRPF38B-202ENST00000370022 IBA57Q5T440 356 aaKnown RBP11.16□□□□□ -0.62
PRPF38B-202ENST00000370022 FAM162BQ5T6X4 162 aa11.16□□□□□ -0.62
PRPF38B-202ENST00000370022 Q6ZQT7 251 aa11.16□□□□□ -0.62
PRPF38B-202ENST00000370022 TENM3Q9P273 2699 aa11.15□□□□□ -0.62
PRPF38B-202ENST00000370022 C9JCJ5 164 aa11.15□□□□□ -0.62
PRPF38B-202ENST00000370022 PRM2P04554 102 aa11.15□□□□□ -0.62
PRPF38B-202ENST00000370022 SPART-AS1P0CW21 52 aa11.15□□□□□ -0.62
PRPF38B-202ENST00000370022 EMP1P54849 157 aa11.15□□□□□ -0.62
PRPF38B-202ENST00000370022 ZNF674Q2M3X9 581 aa11.15□□□□□ -0.62
PRPF38B-202ENST00000370022 MUC21Q5SSG8 566 aa11.15□□□□□ -0.62
PRPF38B-202ENST00000370022 C11orf45Q8TAV5 145 aa11.15□□□□□ -0.62
PRPF38B-202ENST00000370022 PARLQ9H300 379 aa11.15□□□□□ -0.62
PRPF38B-202ENST00000370022 NAGKQ9UJ70 344 aa11.15□□□□□ -0.62
PRPF38B-202ENST00000370022 TRGV11A0A075B6L2 103 aa11.14□□□□□ -0.63
PRPF38B-202ENST00000370022 PLAC8L1A1L4L8 177 aa11.14□□□□□ -0.63
PRPF38B-202ENST00000370022 CXorf65A6NEN9 183 aa11.14□□□□□ -0.63
PRPF38B-202ENST00000370022 SNURFLB1AK76 121 aa11.14□□□□□ -0.63
PRPF38B-202ENST00000370022 SRP19P09132 144 aaKnown RBP11.14□□□□□ -0.63
PRPF38B-202ENST00000370022 S100PP25815 95 aa11.14□□□□□ -0.63
PRPF38B-202ENST00000370022 NHLRC2Q8NBF2 726 aa11.14□□□□□ -0.63
PRPF38B-202ENST00000370022 SDF2L1Q9HCN8 221 aa11.14□□□□□ -0.63
PRPF38B-202ENST00000370022 TIMM8BQ9Y5J9 83 aaPredicted RBP11.14□□□□□ -0.63
PRPF38B-202ENST00000370022 RAB19A4D1S5 217 aa11.13□□□□□ -0.63
PRPF38B-202ENST00000370022 LYRM9A8MSI8 78 aa11.13□□□□□ -0.63
PRPF38B-202ENST00000370022 LINC00587B1AMM8 73 aa11.13□□□□□ -0.63
PRPF38B-202ENST00000370022 CRIP1P50238 77 aa11.13□□□□□ -0.63
PRPF38B-202ENST00000370022 C11orf72Q8NBR9 251 aa11.13□□□□□ -0.63
PRPF38B-202ENST00000370022 DKK2Q9UBU2 259 aa11.13□□□□□ -0.63
PRPF38B-202ENST00000370022 TRBV20OR9-2A0A075B6H5 130 aa11.12□□□□□ -0.63
PRPF38B-202ENST00000370022 ZNF415Q09FC8 603 aa11.12□□□□□ -0.63
PRPF38B-202ENST00000370022 DAZ2Q13117 558 aaKnown RBP11.12□□□□□ -0.63
PRPF38B-202ENST00000370022 TP53TG3Q9ULZ0 132 aa11.12□□□□□ -0.63
PRPF38B-202ENST00000370022 SH2D1AO60880 128 aa11.11□□□□□ -0.63
PRPF38B-202ENST00000370022 CEBPGP53567 150 aa11.11□□□□□ -0.63
PRPF38B-202ENST00000370022 TCL1AP56279 114 aa11.11□□□□□ -0.63
PRPF38B-202ENST00000370022 FAM222AQ5U5X8 452 aa11.11□□□□□ -0.63
PRPF38B-202ENST00000370022 STAB2Q8WWQ8 2551 aa11.11□□□□□ -0.63
PRPF38B-202ENST00000370022 IGLV2-8P01709 118 aa11.11□□□□□ -0.63
PRPF38B-202ENST00000370022 TYMSP04818 313 aa11.11□□□□□ -0.63
PRPF38B-202ENST00000370022 AKR1D1P51857 326 aa11.11□□□□□ -0.63
PRPF38B-202ENST00000370022 FAM74A3Q4VXF1 159 aa11.11□□□□□ -0.63
PRPF38B-202ENST00000370022 GSN-AS1Q9NRJ2 163 aa11.11□□□□□ -0.63
PRPF38B-202ENST00000370022 C11orf21Q9P2W6 132 aa11.11□□□□□ -0.63
PRPF38B-202ENST00000370022 ORM1P02763 201 aa11.1□□□□□ -0.63
PRPF38B-202ENST00000370022 MGST1P10620 155 aaKnown RBP11.1□□□□□ -0.63
PRPF38B-202ENST00000370022 SRSF3P84103 164 aaKnown RBP11.1□□□□□ -0.63
PRPF38B-202ENST00000370022 LINC01559Q495D7 138 aa11.1□□□□□ -0.63
PRPF38B-202ENST00000370022 PRR27Q6MZM9 219 aa11.1□□□□□ -0.63
PRPF38B-202ENST00000370022 SMIM7Q9BQ49 75 aa11.1□□□□□ -0.63
PRPF38B-202ENST00000370022 NOP10Q9NPE3 64 aaKnown RBP11.1□□□□□ -0.63
PRPF38B-202ENST00000370022 CELA1Q9UNI1 258 aa11.1□□□□□ -0.63
PRPF38B-202ENST00000370022 LY96Q9Y6Y9 160 aa11.1□□□□□ -0.63
PRPF38B-202ENST00000370022 IGKV3D-20A0A0C4DH25 116 aa11.09□□□□□ -0.63
PRPF38B-202ENST00000370022 IGHV3-16A0A0C4DH30 117 aa11.09□□□□□ -0.63
PRPF38B-202ENST00000370022 ZNF727A8MUV8 499 aa11.09□□□□□ -0.63
PRPF38B-202ENST00000370022 B4DEV8 164 aa11.09□□□□□ -0.63
PRPF38B-202ENST00000370022 GNRH2O43555 120 aa11.09□□□□□ -0.63
PRPF38B-202ENST00000370022 MUC7Q8TAX7 377 aa11.09□□□□□ -0.63
PRPF38B-202ENST00000370022 SPXQ9BT56 116 aa11.09□□□□□ -0.63
PRPF38B-202ENST00000370022 MDFICQ9P1T7 246 aa11.09□□□□□ -0.63
PRPF38B-202ENST00000370022 NANOS2P60321 138 aaKnown RBP11.08□□□□□ -0.64
PRPF38B-202ENST00000370022 C12orf74Q32Q52 190 aa11.08□□□□□ -0.64
PRPF38B-202ENST00000370022 LGALS9BQ3B8N2 356 aa11.08□□□□□ -0.64
PRPF38B-202ENST00000370022 DAZAP1Q96EP5 407 aaKnown RBP11.08□□□□□ -0.64
PRPF38B-202ENST00000370022 PGPEP1LA6NFU8 196 aa11.07□□□□□ -0.64
PRPF38B-202ENST00000370022 C9JQL5 133 aa11.07□□□□□ -0.64
PRPF38B-202ENST00000370022 RAB4BP61018 213 aa11.07□□□□□ -0.64
PRPF38B-202ENST00000370022 DAD1P61803 113 aa11.07□□□□□ -0.64
PRPF38B-202ENST00000370022 OCC1Q8TAD7 63 aa11.07□□□□□ -0.64
PRPF38B-202ENST00000370022 C3orf84H3BNL1 204 aa11.07□□□□□ -0.64
PRPF38B-202ENST00000370022 M0R036 132 aa11.07□□□□□ -0.64
PRPF38B-202ENST00000370022 SPINK4O60575 86 aa11.07□□□□□ -0.64
PRPF38B-202ENST00000370022 ASIPP42127 132 aa11.07□□□□□ -0.64
PRPF38B-202ENST00000370022 OR5I1Q13606 314 aa11.07□□□□□ -0.64
PRPF38B-202ENST00000370022 DNLZQ5SXM8 178 aa11.07□□□□□ -0.64
PRPF38B-202ENST00000370022 UQCC3Q6UW78 93 aa11.07□□□□□ -0.64
PRPF38B-202ENST00000370022 LINC00612Q8N6U2 182 aa11.07□□□□□ -0.64
PRPF38B-202ENST00000370022 C19orf71A6NCJ1 209 aa11.06□□□□□ -0.64
PRPF38B-202ENST00000370022 CXCL1P09341 107 aa11.06□□□□□ -0.64
PRPF38B-202ENST00000370022 DEFB130BP0DP73 79 aa11.06□□□□□ -0.64
PRPF38B-202ENST00000370022 DEFB130AP0DP74 79 aa11.06□□□□□ -0.64
PRPF38B-202ENST00000370022 S100A4P26447 101 aaKnown RBP11.06□□□□□ -0.64
PRPF38B-202ENST00000370022 SOHLH1Q5JUK2 328 aa11.06□□□□□ -0.64
PRPF38B-202ENST00000370022 K7EN84 100 aa11.05□□□□□ -0.64
PRPF38B-202ENST00000370022 P01737 135 aa11.05□□□□□ -0.64
PRPF38B-202ENST00000370022 TMEM241Q24JQ0 296 aa11.05□□□□□ -0.64
PRPF38B-202ENST00000370022 Q6ZTC4 211 aa11.05□□□□□ -0.64
PRPF38B-202ENST00000370022 C9orf85Q96MD7 179 aa11.05□□□□□ -0.64
PRPF38B-202ENST00000370022 C18orf15Q96N68 181 aa11.05□□□□□ -0.64
PRPF38B-202ENST00000370022 IL36BQ9NZH7 164 aa11.05□□□□□ -0.64
PRPF38B-202ENST00000370022 TRGV1A0A0A0MS02 117 aa11.04□□□□□ -0.64
PRPF38B-202ENST00000370022 NUPR2A6NF83 97 aa11.04□□□□□ -0.64
PRPF38B-202ENST00000370022 M0R2P5 195 aa11.04□□□□□ -0.64
PRPF38B-202ENST00000370022 RPS20P60866 119 aaKnown RBP11.04□□□□□ -0.64
PRPF38B-202ENST00000370022 LINC01551Q86U37 167 aa11.04□□□□□ -0.64
PRPF38B-202ENST00000370022 RASL10AQ92737 203 aa11.04□□□□□ -0.64
PRPF38B-202ENST00000370022 PTH2Q96A98 100 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms