RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 NDUFA12Q9UI09 145 aa9.99□□□□□ -0.81
HCFC1-202ENST00000369984 DSCAMO60469 2012 aa9.99□□□□□ -0.81
HCFC1-202ENST00000369984 NTN3O00634 580 aaPredicted RBP9.99□□□□□ -0.81
HCFC1-202ENST00000369984 SIGLEC8Q9NYZ4 499 aa9.99□□□□□ -0.81
HCFC1-202ENST00000369984 CDKN1BP46527 198 aa9.99□□□□□ -0.81
HCFC1-202ENST00000369984 BVES-AS1Q5T3Y7 98 aa9.99□□□□□ -0.81
HCFC1-202ENST00000369984 PRSS29PA6NIE9 313 aa9.98□□□□□ -0.81
HCFC1-202ENST00000369984 ACYP1P07311 99 aa9.98□□□□□ -0.81
HCFC1-202ENST00000369984 Q0VFX4 171 aa9.98□□□□□ -0.81
HCFC1-202ENST00000369984 ZNRF2Q8NHG8 242 aa9.98□□□□□ -0.81
HCFC1-202ENST00000369984 GNLYP22749 145 aa9.98□□□□□ -0.81
HCFC1-202ENST00000369984 NDUFA4L2Q9NRX3 87 aa9.98□□□□□ -0.81
HCFC1-202ENST00000369984 V9GYY9 64 aa9.98□□□□□ -0.81
HCFC1-202ENST00000369984 IGKV3D-7A0A0C4DH55 119 aa9.98□□□□□ -0.81
HCFC1-202ENST00000369984 LGALS9BQ3B8N2 356 aa9.98□□□□□ -0.81
HCFC1-202ENST00000369984 LGALS9CQ6DKI2 356 aa9.98□□□□□ -0.81
HCFC1-202ENST00000369984 ORMDL1Q9P0S3 153 aa9.98□□□□□ -0.81
HCFC1-202ENST00000369984 HERVK_113P63121 156 aa9.98□□□□□ -0.81
HCFC1-202ENST00000369984 TEX36Q5VZQ5 186 aa9.98□□□□□ -0.81
HCFC1-202ENST00000369984 IGHV1OR15-1A0A075B7D0 117 aa9.97□□□□□ -0.81
HCFC1-202ENST00000369984 F8VRH5 84 aa9.97□□□□□ -0.81
HCFC1-202ENST00000369984 ZNF134P52741 427 aa9.97□□□□□ -0.81
HCFC1-202ENST00000369984 MRPL35Q9NZE8 188 aaKnown RBP9.97□□□□□ -0.81
HCFC1-202ENST00000369984 TRBV19A0A075B6N1 114 aa9.97□□□□□ -0.81
HCFC1-202ENST00000369984 IGHV4-4A0A075B6R2 117 aa9.97□□□□□ -0.81
HCFC1-202ENST00000369984 BAALC-AS2P0C853 105 aa9.97□□□□□ -0.81
HCFC1-202ENST00000369984 ANGP03950 147 aaKnown RBP9.97□□□□□ -0.81
HCFC1-202ENST00000369984 RNASE13Q5GAN3 156 aaKnown RBP9.97□□□□□ -0.81
HCFC1-202ENST00000369984 V9GYV3 84 aa9.97□□□□□ -0.81
HCFC1-202ENST00000369984 PSMB8P28062 276 aa9.97□□□□□ -0.81
HCFC1-202ENST00000369984 IGHV2-70P01814 119 aa9.96□□□□□ -0.81
HCFC1-202ENST00000369984 ATOX1O00244 68 aa9.96□□□□□ -0.81
HCFC1-202ENST00000369984 CSRP1P21291 193 aaKnown RBP9.96□□□□□ -0.81
HCFC1-202ENST00000369984 IGLL1P15814 213 aa9.96□□□□□ -0.82
HCFC1-202ENST00000369984 C9JQL5 133 aa9.96□□□□□ -0.82
HCFC1-202ENST00000369984 NTN5Q8WTR8 489 aaPredicted RBP9.96□□□□□ -0.82
HCFC1-202ENST00000369984 YPEL3P61236 119 aaPredicted RBP9.96□□□□□ -0.82
HCFC1-202ENST00000369984 SRSF2Q01130 221 aaKnown RBP9.96□□□□□ -0.82
HCFC1-202ENST00000369984 RNF183Q96D59 192 aa9.95□□□□□ -0.82
HCFC1-202ENST00000369984 ZNF833PQ6ZTB9 187 aa9.95□□□□□ -0.82
HCFC1-202ENST00000369984 GATA4P43694 442 aa9.95□□□□□ -0.82
HCFC1-202ENST00000369984 ZC2HC1AQ96GY0 325 aa9.95□□□□□ -0.82
HCFC1-202ENST00000369984 IGF2BP2-AS1Q96M15 143 aa9.95□□□□□ -0.82
HCFC1-202ENST00000369984 E7EQL1 145 aa9.95□□□□□ -0.82
HCFC1-202ENST00000369984 CD59P13987 128 aa9.95□□□□□ -0.82
HCFC1-202ENST00000369984 GATA3P23771 443 aa9.95□□□□□ -0.82
HCFC1-202ENST00000369984 ASPHD1Q5U4P2 390 aa9.95□□□□□ -0.82
HCFC1-202ENST00000369984 IGFBPL1Q8WX77 278 aa9.95□□□□□ -0.82
HCFC1-202ENST00000369984 CASC2Q6XLA1 102 aa9.95□□□□□ -0.82
HCFC1-202ENST00000369984 J3QQQ9 107 aa9.95□□□□□ -0.82
HCFC1-202ENST00000369984 UBE2E1P51965 193 aa9.95□□□□□ -0.82
HCFC1-202ENST00000369984 MST1LQ2TV78 715 aa9.95□□□□□ -0.82
HCFC1-202ENST00000369984 FAM110DQ8TAY7 271 aaPredicted RBP9.95□□□□□ -0.82
HCFC1-202ENST00000369984 CCL25O15444 150 aa9.94□□□□□ -0.82
HCFC1-202ENST00000369984 MBD3L4A6NDZ8 208 aaPredicted RBP9.94□□□□□ -0.82
HCFC1-202ENST00000369984 MBD3L3A6NE82 208 aaPredicted RBP9.94□□□□□ -0.82
HCFC1-202ENST00000369984 MBD3L5A6NJ08 208 aaPredicted RBP9.94□□□□□ -0.82
HCFC1-202ENST00000369984 IGKV1-39P01597 117 aa9.94□□□□□ -0.82
HCFC1-202ENST00000369984 IGKV1D-39P04432 117 aa9.94□□□□□ -0.82
HCFC1-202ENST00000369984 MBD3L2Q8NHZ7 208 aaPredicted RBP9.94□□□□□ -0.82
HCFC1-202ENST00000369984 PRR25Q96S07 402 aa9.94□□□□□ -0.82
HCFC1-202ENST00000369984 NUP210LQ5VU65 1888 aa9.94□□□□□ -0.82
HCFC1-202ENST00000369984 TECTAO75443 2155 aa9.94□□□□□ -0.82
HCFC1-202ENST00000369984 ZNF503Q96F45 646 aa9.94□□□□□ -0.82
HCFC1-202ENST00000369984 A0A096LPF7 62 aa9.94□□□□□ -0.82
HCFC1-202ENST00000369984 MSMBP08118 114 aa9.94□□□□□ -0.82
HCFC1-202ENST00000369984 ETDCA0A1B0GVM5 59 aa9.94□□□□□ -0.82
HCFC1-202ENST00000369984 TEX22C9J3V5 150 aa9.93□□□□□ -0.82
HCFC1-202ENST00000369984 RPL18AQ02543 176 aaKnown RBP9.93□□□□□ -0.82
HCFC1-202ENST00000369984 SIVA1O15304 175 aa9.93□□□□□ -0.82
HCFC1-202ENST00000369984 XCL1P47992 114 aa9.93□□□□□ -0.82
HCFC1-202ENST00000369984 SH2D6Q7Z4S9 175 aa9.93□□□□□ -0.82
HCFC1-202ENST00000369984 RNF223E7ERA6 249 aa9.93□□□□□ -0.82
HCFC1-202ENST00000369984 PRR15LQ9BU68 103 aa9.93□□□□□ -0.82
HCFC1-202ENST00000369984 G3V318 75 aa9.92□□□□□ -0.82
HCFC1-202ENST00000369984 WIPF3A6NGB9 483 aa9.92□□□□□ -0.82
HCFC1-202ENST00000369984 TMEM14CQ9P0S9 112 aa9.92□□□□□ -0.82
HCFC1-202ENST00000369984 H3BRN7 92 aa9.92□□□□□ -0.82
HCFC1-202ENST00000369984 B3GALT5-AS1P59052 145 aa9.92□□□□□ -0.82
HCFC1-202ENST00000369984 DKK2Q9UBU2 259 aa9.92□□□□□ -0.82
HCFC1-202ENST00000369984 NDUFS7O75251 213 aa9.92□□□□□ -0.82
HCFC1-202ENST00000369984 C12orf74Q32Q52 190 aa9.92□□□□□ -0.82
HCFC1-202ENST00000369984 NDUFA4O00483 81 aa9.92□□□□□ -0.82
HCFC1-202ENST00000369984 WIPF2Q8TF74 440 aaPredicted RBP9.92□□□□□ -0.82
HCFC1-202ENST00000369984 CFPP27918 469 aa9.91□□□□□ -0.82
HCFC1-202ENST00000369984 MAPK1IP1LQ8NDC0 245 aa9.91□□□□□ -0.82
HCFC1-202ENST00000369984 TIMM17AQ99595 171 aa9.91□□□□□ -0.82
HCFC1-202ENST00000369984 IGKV1-6A0A0C4DH72 117 aa9.91□□□□□ -0.82
HCFC1-202ENST00000369984 BUB3O43684 328 aa9.91□□□□□ -0.82
HCFC1-202ENST00000369984 TAX1BP3O14907 124 aa9.9□□□□□ -0.82
HCFC1-202ENST00000369984 FAM231DQ6ZW35 169 aa9.9□□□□□ -0.82
HCFC1-202ENST00000369984 IGHV1-69DA0A0B4J2H0 117 aa9.9□□□□□ -0.82
HCFC1-202ENST00000369984 IGHV1-69P01742 117 aa9.9□□□□□ -0.82
HCFC1-202ENST00000369984 VSIG2Q96IQ7 327 aa9.9□□□□□ -0.82
HCFC1-202ENST00000369984 IGKV2D-24A0A075B6R9 120 aa9.9□□□□□ -0.82
HCFC1-202ENST00000369984 C20orf78Q9BR46 151 aa9.9□□□□□ -0.82
HCFC1-202ENST00000369984 NPYP01303 97 aa9.9□□□□□ -0.82
HCFC1-202ENST00000369984 TIRAPP58753 221 aa9.9□□□□□ -0.82
HCFC1-202ENST00000369984 VOPP1Q96AW1 172 aa9.9□□□□□ -0.82
HCFC1-202ENST00000369984 PYGO2Q9BRQ0 406 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms