RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 GGNQ86UU5 652 aa8.1□□□□□ -1.11
SIM1-202ENST00000369208 KIAA1549LQ6ZVL6 1849 aa8.09□□□□□ -1.11
SIM1-202ENST00000369208 RS1O15537 224 aa8.09□□□□□ -1.11
SIM1-202ENST00000369208 ORMDL1Q9P0S3 153 aa8.09□□□□□ -1.11
SIM1-202ENST00000369208 SPTAN1Q13813 2472 aaKnown RBP8.09□□□□□ -1.11
SIM1-202ENST00000369208 ZCCHC24Q8N2G6 241 aaKnown RBP8.09□□□□□ -1.11
SIM1-202ENST00000369208 MRPL35Q9NZE8 188 aaKnown RBP8.09□□□□□ -1.11
SIM1-202ENST00000369208 TGFBR3LH3BV60 316 aa8.09□□□□□ -1.11
SIM1-202ENST00000369208 LINC00694P0DN24 101 aa8.09□□□□□ -1.11
SIM1-202ENST00000369208 IGKV1D-13A0A0B4J2D9 117 aa8.09□□□□□ -1.11
SIM1-202ENST00000369208 CGB7P0DN87 165 aa8.09□□□□□ -1.11
SIM1-202ENST00000369208 IGKV1-13P0DP09 117 aa8.09□□□□□ -1.11
SIM1-202ENST00000369208 FXYD2P54710 66 aa8.09□□□□□ -1.11
SIM1-202ENST00000369208 PINLYPA6NC86 204 aa8.09□□□□□ -1.12
SIM1-202ENST00000369208 J3QQQ9 107 aa8.09□□□□□ -1.12
SIM1-202ENST00000369208 YPEL4Q96NS1 127 aa8.09□□□□□ -1.12
SIM1-202ENST00000369208 TRAV12-1A0A0B4J245 112 aa8.08□□□□□ -1.12
SIM1-202ENST00000369208 IGHV1-69DA0A0B4J2H0 117 aa8.08□□□□□ -1.12
SIM1-202ENST00000369208 IGHV1-69P01742 117 aa8.08□□□□□ -1.12
SIM1-202ENST00000369208 ETV2O00321 342 aaPredicted RBP8.08□□□□□ -1.12
SIM1-202ENST00000369208 PAX4O43316 350 aa8.08□□□□□ -1.12
SIM1-202ENST00000369208 C5orf24Q7Z6I8 188 aa8.08□□□□□ -1.12
SIM1-202ENST00000369208 PCP2Q8IVA1 136 aa8.08□□□□□ -1.12
SIM1-202ENST00000369208 ZNF837Q96EG3 531 aaPredicted RBP8.08□□□□□ -1.12
SIM1-202ENST00000369208 TNRC6BQ9UPQ9 1833 aaKnown RBP8.08□□□□□ -1.12
SIM1-202ENST00000369208 LHBP01229 141 aa8.08□□□□□ -1.12
SIM1-202ENST00000369208 SH2D1AO60880 128 aa8.08□□□□□ -1.12
SIM1-202ENST00000369208 IGKV1D-43A0A0B4J1Z2 117 aa8.08□□□□□ -1.12
SIM1-202ENST00000369208 SLC25A29Q8N8R3 303 aa8.08□□□□□ -1.12
SIM1-202ENST00000369208 RHPN1-AS1Q9BWJ2 59 aa8.08□□□□□ -1.12
SIM1-202ENST00000369208 ZNF474Q6S9Z5 364 aaPredicted RBP8.07□□□□□ -1.12
SIM1-202ENST00000369208 IL17RELQ6ZVW7 336 aa8.07□□□□□ -1.12
SIM1-202ENST00000369208 PFN2P35080 140 aa8.07□□□□□ -1.12
SIM1-202ENST00000369208 SHISA2Q6UWI4 295 aa8.07□□□□□ -1.12
SIM1-202ENST00000369208 HAMPP81172 84 aa8.07□□□□□ -1.12
SIM1-202ENST00000369208 MRPL51Q4U2R6 128 aaKnown RBP8.07□□□□□ -1.12
SIM1-202ENST00000369208 NKAPP1Q8N9T2 125 aa8.07□□□□□ -1.12
SIM1-202ENST00000369208 BAALCQ8WXS3 180 aa8.07□□□□□ -1.12
SIM1-202ENST00000369208 TINCRA0A1B0GVN0 87 aa8.07□□□□□ -1.12
SIM1-202ENST00000369208 CCDC179H3BU77 68 aa8.07□□□□□ -1.12
SIM1-202ENST00000369208 DEFB130BP0DP73 79 aa8.07□□□□□ -1.12
SIM1-202ENST00000369208 DEFB130AP0DP74 79 aa8.07□□□□□ -1.12
SIM1-202ENST00000369208 FAM110DQ8TAY7 271 aaPredicted RBP8.07□□□□□ -1.12
SIM1-202ENST00000369208 RETNQ9HD89 108 aa8.07□□□□□ -1.12
SIM1-202ENST00000369208 ZNF876PQ49A33 203 aa8.06□□□□□ -1.12
SIM1-202ENST00000369208 IL17DQ8TAD2 202 aa8.06□□□□□ -1.12
SIM1-202ENST00000369208 ARMS2P0C7Q2 107 aa8.06□□□□□ -1.12
SIM1-202ENST00000369208 IGLC6P0CF74 106 aa8.06□□□□□ -1.12
SIM1-202ENST00000369208 P0DMU3 169 aa8.06□□□□□ -1.12
SIM1-202ENST00000369208 FAM231AP0DMU4 169 aa8.06□□□□□ -1.12
SIM1-202ENST00000369208 FAM231CP0DMU5 169 aa8.06□□□□□ -1.12
SIM1-202ENST00000369208 F8WDY8 70 aa8.06□□□□□ -1.12
SIM1-202ENST00000369208 LINC00526Q96FQ7 95 aa8.06□□□□□ -1.12
SIM1-202ENST00000369208 C15orf62A8K5M9 175 aa8.06□□□□□ -1.12
SIM1-202ENST00000369208 ZNF726P1Q15940 193 aa8.06□□□□□ -1.12
SIM1-202ENST00000369208 FANCD2OSQ96PS1 177 aa8.06□□□□□ -1.12
SIM1-202ENST00000369208 VWC2Q2TAL6 325 aa8.06□□□□□ -1.12
SIM1-202ENST00000369208 MP68P56378 58 aa8.06□□□□□ -1.12
SIM1-202ENST00000369208 FLVCR1-AS1Q8TAF5 88 aa8.06□□□□□ -1.12
SIM1-202ENST00000369208 INS-IGF2F8WCM5 200 aa8.05□□□□□ -1.12
SIM1-202ENST00000369208 BUB3O43684 328 aa8.05□□□□□ -1.12
SIM1-202ENST00000369208 GAFA1Q96PS6 74 aa8.05□□□□□ -1.12
SIM1-202ENST00000369208 IGKV1-5P01602 117 aa8.05□□□□□ -1.12
SIM1-202ENST00000369208 UBE2BP63146 152 aa8.05□□□□□ -1.12
SIM1-202ENST00000369208 DKK2Q9UBU2 259 aa8.05□□□□□ -1.12
SIM1-202ENST00000369208 TRAV3A0A0B4J244 114 aa8.05□□□□□ -1.12
SIM1-202ENST00000369208 ELANEP08246 267 aa8.05□□□□□ -1.12
SIM1-202ENST00000369208 CFHR2P36980 270 aa8.05□□□□□ -1.12
SIM1-202ENST00000369208 C2orf66Q6UXQ4 117 aa8.05□□□□□ -1.12
SIM1-202ENST00000369208 MED13Q9UHV7 2174 aa8.05□□□□□ -1.12
SIM1-202ENST00000369208 TRAV12-2A0A075B6T6 113 aa8.05□□□□□ -1.12
SIM1-202ENST00000369208 PRIMA1Q86XR5 153 aa8.05□□□□□ -1.12
SIM1-202ENST00000369208 RPL18AQ02543 176 aaKnown RBP8.05□□□□□ -1.12
SIM1-202ENST00000369208 RNF152Q8N8N0 203 aa8.05□□□□□ -1.12
SIM1-202ENST00000369208 TMEM14CQ9P0S9 112 aa8.04□□□□□ -1.12
SIM1-202ENST00000369208 UBE2E2Q96LR5 201 aa8.04□□□□□ -1.12
SIM1-202ENST00000369208 PRRC2AP48634 2157 aaKnown RBP8.04□□□□□ -1.12
SIM1-202ENST00000369208 E7EQL1 145 aa8.04□□□□□ -1.12
SIM1-202ENST00000369208 WISP1O95388 367 aa8.04□□□□□ -1.12
SIM1-202ENST00000369208 TRPT1Q86TN4 253 aaKnown RBP8.04□□□□□ -1.12
SIM1-202ENST00000369208 LMO1P25800 156 aa8.04□□□□□ -1.12
SIM1-202ENST00000369208 PRB3Q04118 309 aaPredicted RBP8.04□□□□□ -1.12
SIM1-202ENST00000369208 TRBV19A0A075B6N1 114 aa8.04□□□□□ -1.12
SIM1-202ENST00000369208 RHOHQ15669 191 aa8.04□□□□□ -1.12
SIM1-202ENST00000369208 UFSP1Q6NVU6 142 aa8.04□□□□□ -1.12
SIM1-202ENST00000369208 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.04□□□□□ -1.12
SIM1-202ENST00000369208 TNCP24821 2201 aa8.03□□□□□ -1.12
SIM1-202ENST00000369208 PMS2P5A8MQ11 134 aa8.03□□□□□ -1.12
SIM1-202ENST00000369208 Q8N1Y9 231 aa8.03□□□□□ -1.12
SIM1-202ENST00000369208 LGALS9O00182 355 aa8.03□□□□□ -1.12
SIM1-202ENST00000369208 Q6P435 159 aa8.03□□□□□ -1.12
SIM1-202ENST00000369208 CYYR1Q96J86 154 aa8.03□□□□□ -1.12
SIM1-202ENST00000369208 FUSP35637 526 aaKnown RBP eCLIP8.03□□□□□ -1.12
SIM1-202ENST00000369208 NDUFB1O75438 58 aa8.03□□□□□ -1.12
SIM1-202ENST00000369208 C9orf66Q5T8R8 295 aa8.03□□□□□ -1.12
SIM1-202ENST00000369208 C1orf159Q96HA4 380 aa8.03□□□□□ -1.12
SIM1-202ENST00000369208 SMIM2Q9BVW6 85 aa8.03□□□□□ -1.12
SIM1-202ENST00000369208 COL8A2P25067 703 aa8.03□□□□□ -1.12
SIM1-202ENST00000369208 IGHV3-64A0A075B6Q5 118 aa8.03□□□□□ -1.12
SIM1-202ENST00000369208 DEFB131AP59861 70 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms