RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 WDR97A6NE52 1622 aa0.27□□□□□ -2.37
ECHDC1-201ENST00000368287 IFITM5A6NNB3 132 aa0.26□□□□□ -2.37
ECHDC1-201ENST00000368287 H0YJX3 145 aa0.26□□□□□ -2.37
ECHDC1-201ENST00000368287 SDC4P31431 198 aa0.26□□□□□ -2.37
ECHDC1-201ENST00000368287 CKS2P33552 79 aa0.26□□□□□ -2.37
ECHDC1-201ENST00000368287 ETV6P41212 452 aa0.26□□□□□ -2.37
ECHDC1-201ENST00000368287 FXYD6P3P58550 94 aa0.26□□□□□ -2.37
ECHDC1-201ENST00000368287 CCSMST1Q4G0I0 132 aa0.26□□□□□ -2.37
ECHDC1-201ENST00000368287 C19orf12Q9NSK7 152 aa0.26□□□□□ -2.37
ECHDC1-201ENST00000368287 RREB1Q92766 1687 aa0.26□□□□□ -2.37
ECHDC1-201ENST00000368287 KMT2DO14686 5537 aa0.26□□□□□ -2.37
ECHDC1-201ENST00000368287 ABCA4P78363 2273 aa0.25□□□□□ -2.37
ECHDC1-201ENST00000368287 DLEC1Q9Y238 1755 aa0.25□□□□□ -2.37
ECHDC1-201ENST00000368287 CPDO75976 1380 aa0.25□□□□□ -2.37
ECHDC1-201ENST00000368287 MED23Q9ULK4 1368 aa0.25□□□□□ -2.37
ECHDC1-201ENST00000368287 IGHV1-24A0A0C4DH33 117 aa0.25□□□□□ -2.37
ECHDC1-201ENST00000368287 FXYD1O00168 92 aa0.25□□□□□ -2.37
ECHDC1-201ENST00000368287 UQCRQO14949 82 aa0.25□□□□□ -2.37
ECHDC1-201ENST00000368287 TPST1O60507 370 aa0.25□□□□□ -2.37
ECHDC1-201ENST00000368287 MT-ND4LP03901 98 aa0.25□□□□□ -2.37
ECHDC1-201ENST00000368287 TFF1P04155 84 aa0.25□□□□□ -2.37
ECHDC1-201ENST00000368287 PCBD1P61457 104 aa0.25□□□□□ -2.37
ECHDC1-201ENST00000368287 RPL37P61927 97 aaKnown RBP0.25□□□□□ -2.37
ECHDC1-201ENST00000368287 RHOHQ15669 191 aa0.25□□□□□ -2.37
ECHDC1-201ENST00000368287 TSKUQ8WUA8 353 aa0.25□□□□□ -2.37
ECHDC1-201ENST00000368287 RBBP6Q7Z6E9 1792 aaKnown RBP0.24□□□□□ -2.37
ECHDC1-201ENST00000368287 ZCCHC6Q5VYS8 1495 aaKnown RBP0.24□□□□□ -2.37
ECHDC1-201ENST00000368287 OVOS2A0A0G2JMS6 1433 aa0.24□□□□□ -2.37
ECHDC1-201ENST00000368287 A0A0G2JMM0 328 aa0.24□□□□□ -2.37
ECHDC1-201ENST00000368287 HIGD1CA8MV81 97 aa0.24□□□□□ -2.37
ECHDC1-201ENST00000368287 J3KT08 172 aa0.24□□□□□ -2.37
ECHDC1-201ENST00000368287 NBEAP1P0C6P0 100 aa0.24□□□□□ -2.37
ECHDC1-201ENST00000368287 IDO2Q6ZQW0 420 aa0.24□□□□□ -2.37
ECHDC1-201ENST00000368287 MRPL40Q9NQ50 206 aaKnown RBP0.24□□□□□ -2.37
ECHDC1-201ENST00000368287 KDM5CP41229 1560 aa0.23□□□□□ -2.37
ECHDC1-201ENST00000368287 PTPRGP23470 1445 aa0.23□□□□□ -2.37
ECHDC1-201ENST00000368287 A0A1B0GW64 132 aa0.23□□□□□ -2.37
ECHDC1-201ENST00000368287 B2MP61769 119 aa0.23□□□□□ -2.37
ECHDC1-201ENST00000368287 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.23□□□□□ -2.37
ECHDC1-201ENST00000368287 DMAC1Q96GE9 116 aa0.23□□□□□ -2.37
ECHDC1-201ENST00000368287 GINS2Q9Y248 185 aa0.23□□□□□ -2.37
ECHDC1-201ENST00000368287 ARHGAP31Q2M1Z3 1444 aa0.22□□□□□ -2.37
ECHDC1-201ENST00000368287 MED13LQ71F56 2210 aa0.22□□□□□ -2.37
ECHDC1-201ENST00000368287 GNG14A0A1W2PPG7 69 aa0.22□□□□□ -2.37
ECHDC1-201ENST00000368287 TSTD3H0UI37 97 aa0.22□□□□□ -2.37
ECHDC1-201ENST00000368287 CD3DP04234 171 aa0.22□□□□□ -2.37
ECHDC1-201ENST00000368287 ADCYAP1P18509 176 aa0.22□□□□□ -2.37
ECHDC1-201ENST00000368287 RPS28P62857 69 aaKnown RBP0.22□□□□□ -2.37
ECHDC1-201ENST00000368287 OR8B8Q15620 311 aa0.22□□□□□ -2.37
ECHDC1-201ENST00000368287 HSD17B12Q53GQ0 312 aa0.22□□□□□ -2.37
ECHDC1-201ENST00000368287 TMEM244Q5VVB8 128 aa0.22□□□□□ -2.37
ECHDC1-201ENST00000368287 OR4S1Q8NGB4 309 aa0.22□□□□□ -2.37
ECHDC1-201ENST00000368287 MAST4O15021 2626 aa0.22□□□□□ -2.37
ECHDC1-201ENST00000368287 SPAG17Q6Q759 2223 aa0.22□□□□□ -2.37
ECHDC1-201ENST00000368287 PLXNA2O75051 1894 aa0.22□□□□□ -2.37
ECHDC1-201ENST00000368287 TANC1Q9C0D5 1861 aa0.22□□□□□ -2.37
ECHDC1-201ENST00000368287 CDK12Q9NYV4 1490 aaPredicted RBP0.22□□□□□ -2.37
ECHDC1-201ENST00000368287 CASZ1Q86V15 1759 aa0.22□□□□□ -2.37
ECHDC1-201ENST00000368287 TRAV36DV7A0A075B6V5 113 aa0.21□□□□□ -2.38
ECHDC1-201ENST00000368287 CCKP06307 115 aa0.21□□□□□ -2.38
ECHDC1-201ENST00000368287 PAEPP09466 180 aa0.21□□□□□ -2.38
ECHDC1-201ENST00000368287 LSM3P62310 102 aaKnown RBP0.21□□□□□ -2.38
ECHDC1-201ENST00000368287 PSPHP78330 225 aa0.21□□□□□ -2.38
ECHDC1-201ENST00000368287 SPINK13Q1W4C9 94 aa0.21□□□□□ -2.38
ECHDC1-201ENST00000368287 OR8I2Q8N0Y5 310 aa0.21□□□□□ -2.38
ECHDC1-201ENST00000368287 SKA2Q8WVK7 121 aaPredicted RBP0.21□□□□□ -2.38
ECHDC1-201ENST00000368287 ATG5Q9H1Y0 275 aa0.21□□□□□ -2.38
ECHDC1-201ENST00000368287 METTL1Q9UBP6 276 aaKnown RBP0.21□□□□□ -2.38
ECHDC1-201ENST00000368287 TRAV17A0A0B4J275 112 aa0.2□□□□□ -2.38
ECHDC1-201ENST00000368287 DPM2O94777 84 aa0.2□□□□□ -2.38
ECHDC1-201ENST00000368287 TNFSF15O95150 251 aa0.2□□□□□ -2.38
ECHDC1-201ENST00000368287 DNAJC15Q9Y5T4 150 aa0.2□□□□□ -2.38
ECHDC1-201ENST00000368287 MAP2P11137 1827 aaKnown RBP0.2□□□□□ -2.38
ECHDC1-201ENST00000368287 ARAP1Q96P48 1450 aa0.19□□□□□ -2.38
ECHDC1-201ENST00000368287 A0A1B0GX51 115 aa0.19□□□□□ -2.38
ECHDC1-201ENST00000368287 DEGS1O15121 323 aa0.19□□□□□ -2.38
ECHDC1-201ENST00000368287 POLR2JP52435 117 aaKnown RBP0.19□□□□□ -2.38
ECHDC1-201ENST00000368287 UNQ5815/PRO19632Q6UWF5 114 aa0.19□□□□□ -2.38
ECHDC1-201ENST00000368287 TMEM91Q6ZNR0 172 aa0.19□□□□□ -2.38
ECHDC1-201ENST00000368287 BANF2Q9H503 90 aa0.19□□□□□ -2.38
ECHDC1-201ENST00000368287 CALML5Q9NZT1 146 aa0.19□□□□□ -2.38
ECHDC1-201ENST00000368287 HSPB11Q9Y547 144 aa0.19□□□□□ -2.38
ECHDC1-201ENST00000368287 JMJD1CQ15652 2540 aa0.19□□□□□ -2.38
ECHDC1-201ENST00000368287 CACNA1HO95180 2353 aa0.18□□□□□ -2.38
ECHDC1-201ENST00000368287 TPRP12270 2363 aaKnown RBP0.18□□□□□ -2.38
ECHDC1-201ENST00000368287 CXorf51AA0A1B0GTR3 108 aa0.18□□□□□ -2.38
ECHDC1-201ENST00000368287 C9JAW5 83 aa0.18□□□□□ -2.38
ECHDC1-201ENST00000368287 HIST1H1BP16401 226 aaKnown RBP0.18□□□□□ -2.38
ECHDC1-201ENST00000368287 KLKP1Q107X0 134 aa0.18□□□□□ -2.38
ECHDC1-201ENST00000368287 TAC4Q86UU9 113 aa0.18□□□□□ -2.38
ECHDC1-201ENST00000368287 TMEM14BQ9NUH8 114 aa0.18□□□□□ -2.38
ECHDC1-201ENST00000368287 HIGD1AQ9Y241 93 aa0.18□□□□□ -2.38
ECHDC1-201ENST00000368287 A0A096LNT2 108 aa0.17□□□□□ -2.38
ECHDC1-201ENST00000368287 TRBV10-1A0A0K0K1A3 114 aa0.17□□□□□ -2.38
ECHDC1-201ENST00000368287 CMPK1P30085 196 aa0.17□□□□□ -2.38
ECHDC1-201ENST00000368287 SLC25A26Q70HW3 274 aa0.17□□□□□ -2.38
ECHDC1-201ENST00000368287 SLC35B3Q9H1N7 401 aa0.17□□□□□ -2.38
ECHDC1-201ENST00000368287 KIF13AQ9H1H9 1805 aa0.17□□□□□ -2.38
ECHDC1-201ENST00000368287 SYNJ1O43426 1573 aa0.16□□□□□ -2.38
ECHDC1-201ENST00000368287 BLMP54132 1417 aaPredicted RBP0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms