RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 Q6ZTI0 123 aa6.92□□□□□ -1.3
CD48-202ENST00000368046 CYB561D1Q8N8Q1 229 aa6.92□□□□□ -1.3
CD48-202ENST00000368046 MBD3L1Q8WWY6 194 aa6.92□□□□□ -1.3
CD48-202ENST00000368046 SGK494Q96LW2 274 aa6.92□□□□□ -1.3
CD48-202ENST00000368046 NDFIP1Q9BT67 221 aa6.92□□□□□ -1.3
CD48-202ENST00000368046 ALMS1Q8TCU4 4167 aa6.92□□□□□ -1.3
CD48-202ENST00000368046 TRGV2A0A075B6R0 118 aa6.91□□□□□ -1.3
CD48-202ENST00000368046 TRGV1A0A0A0MS02 117 aa6.91□□□□□ -1.3
CD48-202ENST00000368046 MAP1LC3B2A6NCE7 125 aa6.91□□□□□ -1.3
CD48-202ENST00000368046 FAM74A7A6NL05 159 aa6.91□□□□□ -1.3
CD48-202ENST00000368046 PFDN1O60925 122 aa6.91□□□□□ -1.3
CD48-202ENST00000368046 IFNA7P01567 189 aa6.91□□□□□ -1.3
CD48-202ENST00000368046 IGLV2-11P01706 119 aa6.91□□□□□ -1.3
CD48-202ENST00000368046 FHITP49789 147 aa6.91□□□□□ -1.3
CD48-202ENST00000368046 FGF8P55075 233 aaPredicted RBP6.91□□□□□ -1.3
CD48-202ENST00000368046 FLI1Q01543 452 aaPredicted RBP6.91□□□□□ -1.3
CD48-202ENST00000368046 LGALSLQ3ZCW2 172 aaPredicted RBP6.91□□□□□ -1.3
CD48-202ENST00000368046 TCTE3Q8IZS6 198 aa6.91□□□□□ -1.3
CD48-202ENST00000368046 KCNS1Q96KK3 526 aa6.91□□□□□ -1.3
CD48-202ENST00000368046 ATG101Q9BSB4 218 aa6.91□□□□□ -1.3
CD48-202ENST00000368046 SPXQ9BT56 116 aa6.91□□□□□ -1.3
CD48-202ENST00000368046 MAP1LC3BQ9GZQ8 125 aa6.91□□□□□ -1.3
CD48-202ENST00000368046 MDFICQ9P1T7 246 aa6.91□□□□□ -1.3
CD48-202ENST00000368046 TRGV11A0A075B6L2 103 aa6.9□□□□□ -1.3
CD48-202ENST00000368046 H3BNG1 76 aa6.9□□□□□ -1.3
CD48-202ENST00000368046 GNRH2O43555 120 aa6.9□□□□□ -1.3
CD48-202ENST00000368046 TPT1P13693 172 aaKnown RBP6.9□□□□□ -1.3
CD48-202ENST00000368046 HOXA5P20719 270 aa6.9□□□□□ -1.3
CD48-202ENST00000368046 UBE2G2P60604 165 aa6.9□□□□□ -1.3
CD48-202ENST00000368046 ZNF415Q09FC8 603 aa6.9□□□□□ -1.3
CD48-202ENST00000368046 DPPA3Q6W0C5 159 aa6.9□□□□□ -1.3
CD48-202ENST00000368046 PRNTQ86SH4 94 aa6.9□□□□□ -1.3
CD48-202ENST00000368046 TMEM75Q8N9X5 138 aa6.9□□□□□ -1.3
CD48-202ENST00000368046 SFT2D1Q8WV19 159 aa6.9□□□□□ -1.3
CD48-202ENST00000368046 HIST1H2BAQ96A08 127 aa6.9□□□□□ -1.3
CD48-202ENST00000368046 LINC00479Q96M42 142 aa6.9□□□□□ -1.3
CD48-202ENST00000368046 VPS13DQ5THJ4 4388 aa6.9□□□□□ -1.31
CD48-202ENST00000368046 TRAV26-1A0A087WT03 109 aa6.89□□□□□ -1.31
CD48-202ENST00000368046 F6UZH7 168 aa6.89□□□□□ -1.31
CD48-202ENST00000368046 NUDT3O95989 172 aa6.89□□□□□ -1.31
CD48-202ENST00000368046 GCGP01275 180 aa6.89□□□□□ -1.31
CD48-202ENST00000368046 C1QBP02746 253 aa6.89□□□□□ -1.31
CD48-202ENST00000368046 PPT1P50897 306 aa6.89□□□□□ -1.31
CD48-202ENST00000368046 TMEM183BQ1AE95 376 aa6.89□□□□□ -1.31
CD48-202ENST00000368046 SMUG1Q53HV7 270 aa6.89□□□□□ -1.31
CD48-202ENST00000368046 UBE2DNLQ8IWF7 75 aa6.89□□□□□ -1.31
CD48-202ENST00000368046 TMEM183AQ8IXX5 376 aa6.89□□□□□ -1.31
CD48-202ENST00000368046 FAM213BQ8TBF2 198 aa6.89□□□□□ -1.31
CD48-202ENST00000368046 C8orf49Q96NF6 230 aa6.89□□□□□ -1.31
CD48-202ENST00000368046 TRAV34A0A0B4J273 112 aa6.88□□□□□ -1.31
CD48-202ENST00000368046 PEX7O00628 323 aa6.88□□□□□ -1.31
CD48-202ENST00000368046 PFN1P07737 140 aaKnown RBP6.88□□□□□ -1.31
CD48-202ENST00000368046 ZNF80P51504 273 aaPredicted RBP6.88□□□□□ -1.31
CD48-202ENST00000368046 FAM3BP58499 235 aaPredicted RBP6.88□□□□□ -1.31
CD48-202ENST00000368046 SLAQ13239 276 aa6.88□□□□□ -1.31
CD48-202ENST00000368046 ZFP69Q49AA0 526 aa6.88□□□□□ -1.31
CD48-202ENST00000368046 CST9LP1Q5W188 147 aa6.88□□□□□ -1.31
CD48-202ENST00000368046 EIF5AL1Q6IS14 154 aaKnown RBP6.88□□□□□ -1.31
CD48-202ENST00000368046 RASL10AQ92737 203 aa6.88□□□□□ -1.31
CD48-202ENST00000368046 TCEAL7Q9BRU2 100 aa6.88□□□□□ -1.31
CD48-202ENST00000368046 SDF2L1Q9HCN8 221 aa6.88□□□□□ -1.31
CD48-202ENST00000368046 MRPL16Q9NX20 251 aaKnown RBP6.88□□□□□ -1.31
CD48-202ENST00000368046 NAGKQ9UJ70 344 aa6.88□□□□□ -1.31
CD48-202ENST00000368046 ARL2-SNX15V9GYD0 113 aa6.88□□□□□ -1.31
CD48-202ENST00000368046 IGHV3-16A0A0C4DH30 117 aa6.87□□□□□ -1.31
CD48-202ENST00000368046 A0A0J9YY99 117 aa6.87□□□□□ -1.31
CD48-202ENST00000368046 FABP5P3A8MUU1 101 aa6.87□□□□□ -1.31
CD48-202ENST00000368046 EIF4EBP3O60516 100 aaPredicted RBP6.87□□□□□ -1.31
CD48-202ENST00000368046 PAGE4O60829 102 aa6.87□□□□□ -1.31
CD48-202ENST00000368046 RAB5CP51148 216 aa6.87□□□□□ -1.31
CD48-202ENST00000368046 CCL18P55774 89 aa6.87□□□□□ -1.31
CD48-202ENST00000368046 AKAP14Q86UN6 197 aa6.87□□□□□ -1.31
CD48-202ENST00000368046 C11orf21Q9P2W6 132 aa6.87□□□□□ -1.31
CD48-202ENST00000368046 ZFP30Q9Y2G7 519 aa6.87□□□□□ -1.31
CD48-202ENST00000368046 EPPK1P58107 5090 aaKnown RBP6.86□□□□□ -1.31
CD48-202ENST00000368046 KMT2AQ03164 3969 aa6.86□□□□□ -1.31
CD48-202ENST00000368046 M0R2P5 195 aa6.86□□□□□ -1.31
CD48-202ENST00000368046 TYMSP04818 313 aa6.86□□□□□ -1.31
CD48-202ENST00000368046 UBE2G1P62253 170 aa6.86□□□□□ -1.31
CD48-202ENST00000368046 FHL2Q14192 279 aa6.86□□□□□ -1.31
CD48-202ENST00000368046 COX8CQ7Z4L0 72 aa6.86□□□□□ -1.31
CD48-202ENST00000368046 SLC51BQ86UW2 128 aa6.86□□□□□ -1.31
CD48-202ENST00000368046 FMC1Q96HJ9 113 aa6.86□□□□□ -1.31
CD48-202ENST00000368046 VSIG2Q96IQ7 327 aa6.86□□□□□ -1.31
CD48-202ENST00000368046 PRO0255Q9UI72 69 aa6.86□□□□□ -1.31
CD48-202ENST00000368046 HHLA3Q9XRX5 114 aa6.86□□□□□ -1.31
CD48-202ENST00000368046 hCG_2014768A0A024R1R8 64 aa6.85□□□□□ -1.31
CD48-202ENST00000368046 TRAV1-1A0A0B4J248 108 aa6.85□□□□□ -1.31
CD48-202ENST00000368046 TRBV6-1A0A0K0K1D8 114 aa6.85□□□□□ -1.31
CD48-202ENST00000368046 A0A1B0GV50 99 aa6.85□□□□□ -1.31
CD48-202ENST00000368046 IGHV3-53P01767 116 aa6.85□□□□□ -1.31
CD48-202ENST00000368046 S100A9P06702 114 aaKnown RBP6.85□□□□□ -1.31
CD48-202ENST00000368046 SULT1A2P50226 295 aa6.85□□□□□ -1.31
CD48-202ENST00000368046 CRIP1P50238 77 aa6.85□□□□□ -1.31
CD48-202ENST00000368046 CDPF1Q6NVV7 123 aa6.85□□□□□ -1.31
CD48-202ENST00000368046 LINC00588Q9Y4M8 146 aa6.85□□□□□ -1.31
CD48-202ENST00000368046 A0A096LPF7 62 aa6.84□□□□□ -1.31
CD48-202ENST00000368046 TRGV4A0A0C4DH28 118 aa6.84□□□□□ -1.31
CD48-202ENST00000368046 TEX46H3BTG2 121 aa6.84□□□□□ -1.31
CD48-202ENST00000368046 M0R2N4 97 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms