RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 CHAC1Q9BUX1 264 aa9.43□□□□□ -0.9
PTPN7-202ENST00000367279 NHP2Q9NX24 153 aaKnown RBP9.43□□□□□ -0.9
PTPN7-202ENST00000367279 K7ERU9 68 aa9.43□□□□□ -0.9
PTPN7-202ENST00000367279 SMIM13P0DJ93 91 aa9.43□□□□□ -0.9
PTPN7-202ENST00000367279 RNASE4P34096 147 aaKnown RBP9.43□□□□□ -0.9
PTPN7-202ENST00000367279 FXYD2P54710 66 aa9.43□□□□□ -0.9
PTPN7-202ENST00000367279 C14orf178Q8N769 122 aaPredicted RBP9.43□□□□□ -0.9
PTPN7-202ENST00000367279 OR10J6PQ8NGY7 276 aa9.43□□□□□ -0.9
PTPN7-202ENST00000367279 CNFNQ9BYD5 112 aa9.43□□□□□ -0.9
PTPN7-202ENST00000367279 IGHV7-4-1A0A0J9YVY3 117 aa9.43□□□□□ -0.9
PTPN7-202ENST00000367279 SRSF2Q01130 221 aaKnown RBP9.43□□□□□ -0.9
PTPN7-202ENST00000367279 MEGF9Q9H1U4 602 aa9.43□□□□□ -0.9
PTPN7-202ENST00000367279 MOB4Q9Y3A3 225 aa9.43□□□□□ -0.9
PTPN7-202ENST00000367279 PHLDA3Q9Y5J5 127 aa9.43□□□□□ -0.9
PTPN7-202ENST00000367279 ATP5LO75964 103 aa9.42□□□□□ -0.9
PTPN7-202ENST00000367279 ZFHX3Q15911 3703 aa9.42□□□□□ -0.9
PTPN7-202ENST00000367279 DOPEY2Q9Y3R5 2298 aa9.42□□□□□ -0.9
PTPN7-202ENST00000367279 C19orf84I3L1E1 186 aa9.42□□□□□ -0.9
PTPN7-202ENST00000367279 RIPPLY3P57055 190 aa9.42□□□□□ -0.9
PTPN7-202ENST00000367279 HHLA3Q9XRX5 114 aa9.41□□□□□ -0.9
PTPN7-202ENST00000367279 FABP2P12104 132 aa9.41□□□□□ -0.9
PTPN7-202ENST00000367279 SRSF1Q07955 248 aaKnown RBP eCLIP9.41□□□□□ -0.9
PTPN7-202ENST00000367279 TRBV25-1A0A075B6N4 114 aa9.41□□□□□ -0.9
PTPN7-202ENST00000367279 SIVA1O15304 175 aa9.41□□□□□ -0.9
PTPN7-202ENST00000367279 SAMD5Q5TGI4 173 aa9.41□□□□□ -0.9
PTPN7-202ENST00000367279 RPL39LQ96EH5 51 aaKnown RBP9.41□□□□□ -0.9
PTPN7-202ENST00000367279 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.4□□□□□ -0.9
PTPN7-202ENST00000367279 K7EP34 96 aa9.4□□□□□ -0.9
PTPN7-202ENST00000367279 C9orf47Q6ZRZ4 202 aa9.4□□□□□ -0.9
PTPN7-202ENST00000367279 NRACQ8N912 160 aa9.4□□□□□ -0.9
PTPN7-202ENST00000367279 AGRNO00468 2067 aa9.4□□□□□ -0.9
PTPN7-202ENST00000367279 A0A1W2PPM0 123 aa9.4□□□□□ -0.9
PTPN7-202ENST00000367279 RPL24P83731 157 aaKnown RBP9.4□□□□□ -0.9
PTPN7-202ENST00000367279 C9orf139Q6ZV77 190 aa9.4□□□□□ -0.9
PTPN7-202ENST00000367279 NEGR1Q7Z3B1 354 aa9.4□□□□□ -0.9
PTPN7-202ENST00000367279 SCGB3A1Q96QR1 104 aa9.4□□□□□ -0.9
PTPN7-202ENST00000367279 H3BUX3 64 aa9.39□□□□□ -0.91
PTPN7-202ENST00000367279 GNRH2O43555 120 aa9.39□□□□□ -0.91
PTPN7-202ENST00000367279 ANXA2RQ3ZCQ2 193 aa9.39□□□□□ -0.91
PTPN7-202ENST00000367279 GNLYP22749 145 aa9.39□□□□□ -0.91
PTPN7-202ENST00000367279 ASIPP42127 132 aa9.39□□□□□ -0.91
PTPN7-202ENST00000367279 SCGB2A2Q13296 93 aa9.39□□□□□ -0.91
PTPN7-202ENST00000367279 COTL1Q14019 142 aa9.39□□□□□ -0.91
PTPN7-202ENST00000367279 MAPKAPK5-AS1Q8N8E1 139 aa9.39□□□□□ -0.91
PTPN7-202ENST00000367279 HIST1H4GQ99525 98 aa9.39□□□□□ -0.91
PTPN7-202ENST00000367279 SORL1Q92673 2214 aa9.39□□□□□ -0.91
PTPN7-202ENST00000367279 IGHV4-39P01824 125 aa9.39□□□□□ -0.91
PTPN7-202ENST00000367279 IGHV4-38-2P0DP08 117 aa9.39□□□□□ -0.91
PTPN7-202ENST00000367279 ABCA2Q9BZC7 2435 aa9.38□□□□□ -0.91
PTPN7-202ENST00000367279 IGLV2-18A0A075B6J9 118 aa9.38□□□□□ -0.91
PTPN7-202ENST00000367279 TRAV21A0A0B4J279 112 aa9.38□□□□□ -0.91
PTPN7-202ENST00000367279 IGHV1-69DA0A0B4J2H0 117 aa9.38□□□□□ -0.91
PTPN7-202ENST00000367279 IGKV3-20P01619 116 aa9.38□□□□□ -0.91
PTPN7-202ENST00000367279 IGHV1-69P01742 117 aa9.38□□□□□ -0.91
PTPN7-202ENST00000367279 BLCAPP62952 87 aa9.38□□□□□ -0.91
PTPN7-202ENST00000367279 SMIM2Q9BVW6 85 aa9.38□□□□□ -0.91
PTPN7-202ENST00000367279 FAM223BA6NKX1 122 aa9.37□□□□□ -0.91
PTPN7-202ENST00000367279 FAM223AQ8IWN6 122 aa9.37□□□□□ -0.91
PTPN7-202ENST00000367279 SMPXQ9UHP9 88 aa9.37□□□□□ -0.91
PTPN7-202ENST00000367279 IGHV4-61A0A0C4DH41 118 aa9.37□□□□□ -0.91
PTPN7-202ENST00000367279 F5H697 171 aa9.37□□□□□ -0.91
PTPN7-202ENST00000367279 NPFFR1Q9GZQ6 430 aa9.37□□□□□ -0.91
PTPN7-202ENST00000367279 CREBBPQ92793 2442 aa9.37□□□□□ -0.91
PTPN7-202ENST00000367279 SUMO2P61956 95 aaKnown RBP9.37□□□□□ -0.91
PTPN7-202ENST00000367279 MRPL53Q96EL3 112 aaKnown RBP9.37□□□□□ -0.91
PTPN7-202ENST00000367279 LINC00477Q96M19 166 aa9.37□□□□□ -0.91
PTPN7-202ENST00000367279 CHTOPQ9Y3Y2 248 aaKnown RBP9.37□□□□□ -0.91
PTPN7-202ENST00000367279 A0A087WX48 190 aa9.36□□□□□ -0.91
PTPN7-202ENST00000367279 UFSP1Q6NVU6 142 aa9.36□□□□□ -0.91
PTPN7-202ENST00000367279 Q6ZS46 218 aa9.36□□□□□ -0.91
PTPN7-202ENST00000367279 RHPN1-AS1Q9BWJ2 59 aa9.36□□□□□ -0.91
PTPN7-202ENST00000367279 ZMAT4Q9H898 229 aa9.36□□□□□ -0.91
PTPN7-202ENST00000367279 U3KQE9 123 aa9.36□□□□□ -0.91
PTPN7-202ENST00000367279 EDN2P20800 178 aa9.36□□□□□ -0.91
PTPN7-202ENST00000367279 EMP1P54849 157 aa9.36□□□□□ -0.91
PTPN7-202ENST00000367279 PSMG3-AS1Q96PY0 264 aa9.36□□□□□ -0.91
PTPN7-202ENST00000367279 DPH3P1Q9H4G8 78 aa9.36□□□□□ -0.91
PTPN7-202ENST00000367279 CEND1Q8N111 149 aa9.36□□□□□ -0.91
PTPN7-202ENST00000367279 ZFAND2AQ8N6M9 145 aa9.36□□□□□ -0.91
PTPN7-202ENST00000367279 ITLN2Q8WWU7 325 aaPredicted RBP9.36□□□□□ -0.91
PTPN7-202ENST00000367279 OR11H12B2RN74 326 aa9.35□□□□□ -0.91
PTPN7-202ENST00000367279 OVOL1O14753 267 aa9.35□□□□□ -0.91
PTPN7-202ENST00000367279 TMEM95Q3KNT9 176 aa9.35□□□□□ -0.91
PTPN7-202ENST00000367279 MTURNQ8N3F0 131 aa9.35□□□□□ -0.91
PTPN7-202ENST00000367279 OR11H1Q8NG94 326 aa9.35□□□□□ -0.91
PTPN7-202ENST00000367279 OR11H2Q8NH07 326 aa9.35□□□□□ -0.91
PTPN7-202ENST00000367279 MRAP2Q96G30 205 aa9.35□□□□□ -0.91
PTPN7-202ENST00000367279 GPHB5Q86YW7 130 aa9.35□□□□□ -0.91
PTPN7-202ENST00000367279 PIFOQ8TCI5 191 aa9.35□□□□□ -0.91
PTPN7-202ENST00000367279 RASL10AQ92737 203 aa9.35□□□□□ -0.91
PTPN7-202ENST00000367279 PIMREGQ9BSJ6 248 aa9.35□□□□□ -0.91
PTPN7-202ENST00000367279 H7C1H1 209 aa9.34□□□□□ -0.91
PTPN7-202ENST00000367279 NDUFA4O00483 81 aa9.34□□□□□ -0.91
PTPN7-202ENST00000367279 FAM74A4Q5TZK3 123 aa9.34□□□□□ -0.91
PTPN7-202ENST00000367279 CYSLTR1Q9Y271 337 aa9.34□□□□□ -0.91
PTPN7-202ENST00000367279 A0A087WWL8 130 aa9.34□□□□□ -0.91
PTPN7-202ENST00000367279 LINC01546A6NGU7 62 aa9.34□□□□□ -0.91
PTPN7-202ENST00000367279 PLNP26678 52 aa9.34□□□□□ -0.91
PTPN7-202ENST00000367279 ORMDL2Q53FV1 153 aa9.34□□□□□ -0.91
PTPN7-202ENST00000367279 C2orf66Q6UXQ4 117 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms