RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 ZNF491Q8N8L2 437 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 NPBQ8NG41 125 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 SIGLEC8Q9NYZ4 499 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 KIR2DL5BA0A0G2JN68 375 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 KIR2DL5BA0A0G2JPC4 375 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 LRCOL1A6NCL2 159 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 C9orf66Q5T8R8 295 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 ZFAND6Q6FIF0 208 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 KIR2DL5AQ8N109 375 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 C11orf1Q9H5F2 150 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 SCRT2Q9NQ03 307 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 PHF3Q92576 2039 aaKnown RBP7.13□□□□□ -1.27
SYNE1-205ENST00000367251 A0A1B0GUS0 222 aa7.13□□□□□ -1.27
SYNE1-205ENST00000367251 DEFB105AQ8NG35 78 aa7.13□□□□□ -1.27
SYNE1-205ENST00000367251 NOTCH4Q99466 2003 aa7.13□□□□□ -1.27
SYNE1-205ENST00000367251 IGFBPL1Q8WX77 278 aa7.13□□□□□ -1.27
SYNE1-205ENST00000367251 TMEM243Q9BU79 118 aa7.13□□□□□ -1.27
SYNE1-205ENST00000367251 TRAV8-3A0A0A6YYJ7 113 aa7.13□□□□□ -1.27
SYNE1-205ENST00000367251 F8W735 103 aaPredicted RBP7.13□□□□□ -1.27
SYNE1-205ENST00000367251 IGLL1P15814 213 aa7.13□□□□□ -1.27
SYNE1-205ENST00000367251 UBE2AP49459 152 aa7.13□□□□□ -1.27
SYNE1-205ENST00000367251 TCF15Q12870 199 aa7.13□□□□□ -1.27
SYNE1-205ENST00000367251 HLA-DRB4P13762 266 aa7.13□□□□□ -1.27
SYNE1-205ENST00000367251 HAMPP81172 84 aa7.13□□□□□ -1.27
SYNE1-205ENST00000367251 TPSG1Q9NRR2 321 aa7.13□□□□□ -1.27
SYNE1-205ENST00000367251 PLA2G2EQ9NZK7 142 aa7.13□□□□□ -1.27
SYNE1-205ENST00000367251 TSSC4Q9Y5U2 329 aaPredicted RBP7.13□□□□□ -1.27
SYNE1-205ENST00000367251 HLA-DRB4X5D2U9 266 aa7.13□□□□□ -1.27
SYNE1-205ENST00000367251 GAGE2AQ6NT46 116 aa7.12□□□□□ -1.27
SYNE1-205ENST00000367251 BDP1A6H8Y1 2624 aa7.12□□□□□ -1.27
SYNE1-205ENST00000367251 INAFM2P0DMQ5 153 aa7.12□□□□□ -1.27
SYNE1-205ENST00000367251 GAGE2BQ13066 116 aa7.12□□□□□ -1.27
SYNE1-205ENST00000367251 STPG4Q8N801 248 aa7.12□□□□□ -1.27
SYNE1-205ENST00000367251 ZNRF2Q8NHG8 242 aa7.12□□□□□ -1.27
SYNE1-205ENST00000367251 ETDCA0A1B0GVM5 59 aa7.12□□□□□ -1.27
SYNE1-205ENST00000367251 SHISA9B4DS77 424 aa7.12□□□□□ -1.27
SYNE1-205ENST00000367251 F8W1H4 67 aa7.12□□□□□ -1.27
SYNE1-205ENST00000367251 IGHV1OR15-1A0A075B7D0 117 aa7.12□□□□□ -1.27
SYNE1-205ENST00000367251 TRBV6-1A0A0K0K1D8 114 aa7.12□□□□□ -1.27
SYNE1-205ENST00000367251 KLK9Q9UKQ9 250 aa7.12□□□□□ -1.27
SYNE1-205ENST00000367251 TP53TG1Q9Y2A0 90 aa7.12□□□□□ -1.27
SYNE1-205ENST00000367251 K7EP34 96 aa7.12□□□□□ -1.27
SYNE1-205ENST00000367251 C2orf82Q6UX34 121 aa7.11□□□□□ -1.27
SYNE1-205ENST00000367251 KIAA1549LQ6ZVL6 1849 aa7.11□□□□□ -1.27
SYNE1-205ENST00000367251 SPRY4Q9C004 299 aa7.11□□□□□ -1.27
SYNE1-205ENST00000367251 CACNA1AO00555 2505 aa7.11□□□□□ -1.27
SYNE1-205ENST00000367251 OCIAD2Q56VL3 154 aa7.11□□□□□ -1.27
SYNE1-205ENST00000367251 ADAMTSL5Q6ZMM2 481 aa7.11□□□□□ -1.27
SYNE1-205ENST00000367251 ATP6V0BQ99437 205 aa7.11□□□□□ -1.27
SYNE1-205ENST00000367251 IGHV7-4-1A0A0J9YVY3 117 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 F8VRH5 84 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 NBL1P41271 181 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 ZNF493Q6ZR52 646 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 BUB3O43684 328 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 NDUFB1O75438 58 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 GP9P14770 177 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 PRSS57Q6UWY2 283 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 NPYP01303 97 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 PRR31Q5SQ13 230 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 BAALCQ8WXS3 180 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 TM2D2Q9BX73 214 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 GPR179Q6PRD1 2367 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 IGHV3-38A0A0C4DH36 116 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 ELANEP08246 267 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 CDKN1BP46527 198 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 DIAPH2-AS1Q14236 149 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 BVES-AS1Q5T3Y7 98 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 ZNF747Q9BV97 191 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 CTSZQ9UBR2 303 aa7.1□□□□□ -1.27
SYNE1-205ENST00000367251 I3L2K1 104 aa7.09□□□□□ -1.27
SYNE1-205ENST00000367251 HOXB4P17483 251 aaPredicted RBP7.09□□□□□ -1.27
SYNE1-205ENST00000367251 DEFB113Q30KQ7 82 aa7.09□□□□□ -1.27
SYNE1-205ENST00000367251 CEND1Q8N111 149 aa7.09□□□□□ -1.27
SYNE1-205ENST00000367251 IGLL5B9A064 214 aa7.09□□□□□ -1.27
SYNE1-205ENST00000367251 SOCS3O14543 225 aa7.09□□□□□ -1.27
SYNE1-205ENST00000367251 NDUFS7O75251 213 aa7.09□□□□□ -1.27
SYNE1-205ENST00000367251 IGLV2-14P01704 120 aa7.09□□□□□ -1.27
SYNE1-205ENST00000367251 SPART-AS1P0CW21 52 aa7.09□□□□□ -1.27
SYNE1-205ENST00000367251 Q6ZQT7 251 aa7.09□□□□□ -1.27
SYNE1-205ENST00000367251 CCL24O00175 119 aa7.09□□□□□ -1.27
SYNE1-205ENST00000367251 RHOHQ15669 191 aa7.09□□□□□ -1.27
SYNE1-205ENST00000367251 SMAD5-AS1Q9Y6J3 95 aa7.09□□□□□ -1.27
SYNE1-205ENST00000367251 TNCP24821 2201 aa7.09□□□□□ -1.28
SYNE1-205ENST00000367251 SDHAF1A6NFY7 115 aa7.09□□□□□ -1.28
SYNE1-205ENST00000367251 G3V318 75 aa7.09□□□□□ -1.28
SYNE1-205ENST00000367251 LINC01545Q5VT33 79 aa7.09□□□□□ -1.28
SYNE1-205ENST00000367251 NAA38Q9BRA0 125 aaKnown RBP7.09□□□□□ -1.28
SYNE1-205ENST00000367251 DSCR8Q96T75 97 aa7.08□□□□□ -1.28
SYNE1-205ENST00000367251 HIVEP2P31629 2446 aa7.08□□□□□ -1.28
SYNE1-205ENST00000367251 DENND4AQ7Z401 1863 aa7.08□□□□□ -1.28
SYNE1-205ENST00000367251 F6UB75 175 aa7.08□□□□□ -1.28
SYNE1-205ENST00000367251 KIF26AQ9ULI4 1882 aaPredicted RBP7.08□□□□□ -1.28
SYNE1-205ENST00000367251 A0A1W2PPM0 123 aa7.08□□□□□ -1.28
SYNE1-205ENST00000367251 FOXE3Q13461 319 aa7.08□□□□□ -1.28
SYNE1-205ENST00000367251 SPG11Q96JI7 2443 aa7.08□□□□□ -1.28
SYNE1-205ENST00000367251 DOCK8Q8NF50 2099 aa7.08□□□□□ -1.28
SYNE1-205ENST00000367251 P0C879 139 aa7.07□□□□□ -1.28
SYNE1-205ENST00000367251 IGHV3-30P01768 117 aa7.07□□□□□ -1.28
SYNE1-205ENST00000367251 IGHV3-33P01772 117 aa7.07□□□□□ -1.28
SYNE1-205ENST00000367251 IGHV3-30-3P0DP02 117 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms