RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 AAMDCQ9H7C9 122 aa6.79□□□□□ -1.32
CNIH4-202ENST00000366857 TRAV25A0A0B4J276 109 aa6.79□□□□□ -1.32
CNIH4-202ENST00000366857 S100PP25815 95 aa6.79□□□□□ -1.32
CNIH4-202ENST00000366857 RPL32P62910 135 aaKnown RBP6.79□□□□□ -1.32
CNIH4-202ENST00000366857 DEFB136Q30KP8 78 aa6.79□□□□□ -1.32
CNIH4-202ENST00000366857 LINC00482Q8N8I6 264 aa6.79□□□□□ -1.32
CNIH4-202ENST00000366857 SPTAN1Q13813 2472 aaKnown RBP6.79□□□□□ -1.32
CNIH4-202ENST00000366857 IGHV3-16A0A0C4DH30 117 aa6.78□□□□□ -1.32
CNIH4-202ENST00000366857 FABP5P3A8MUU1 101 aa6.78□□□□□ -1.32
CNIH4-202ENST00000366857 CRLF1O75462 422 aa6.78□□□□□ -1.32
CNIH4-202ENST00000366857 ZNF705DP0CH99 300 aaPredicted RBP6.78□□□□□ -1.32
CNIH4-202ENST00000366857 ZNF705BP0CI00 300 aaPredicted RBP6.78□□□□□ -1.32
CNIH4-202ENST00000366857 IQCF2Q8IXL9 164 aa6.78□□□□□ -1.32
CNIH4-202ENST00000366857 DNAH10Q8IVF4 4471 aa6.78□□□□□ -1.32
CNIH4-202ENST00000366857 AGRNO00468 2067 aa6.78□□□□□ -1.32
CNIH4-202ENST00000366857 PLECQ15149 4684 aaKnown RBP6.78□□□□□ -1.32
CNIH4-202ENST00000366857 H3BMM0 161 aa6.78□□□□□ -1.32
CNIH4-202ENST00000366857 EBLN2Q6P2I7 272 aa6.78□□□□□ -1.32
CNIH4-202ENST00000366857 GRIFINA4D1Z8 144 aa6.78□□□□□ -1.32
CNIH4-202ENST00000366857 SCGB2A1O75556 95 aa6.77□□□□□ -1.32
CNIH4-202ENST00000366857 MRPL51Q4U2R6 128 aaKnown RBP6.77□□□□□ -1.32
CNIH4-202ENST00000366857 FOXI2Q6ZQN5 318 aa6.77□□□□□ -1.32
CNIH4-202ENST00000366857 TRPT1Q86TN4 253 aaKnown RBP6.77□□□□□ -1.32
CNIH4-202ENST00000366857 ABCA1O95477 2261 aa6.77□□□□□ -1.33
CNIH4-202ENST00000366857 IGHV3-49A0A0A0MS15 119 aa6.77□□□□□ -1.33
CNIH4-202ENST00000366857 IGHV1-24A0A0C4DH33 117 aa6.77□□□□□ -1.33
CNIH4-202ENST00000366857 NDUFA6P56556 154 aa6.77□□□□□ -1.33
CNIH4-202ENST00000366857 SYNJ2BPP57105 145 aa6.77□□□□□ -1.33
CNIH4-202ENST00000366857 SLC35B1P78383 322 aa6.77□□□□□ -1.33
CNIH4-202ENST00000366857 OR11H1Q8NG94 326 aa6.77□□□□□ -1.33
CNIH4-202ENST00000366857 MAP6D1Q9H9H5 199 aa6.77□□□□□ -1.33
CNIH4-202ENST00000366857 A0A1B0GUT8 65 aa6.77□□□□□ -1.33
CNIH4-202ENST00000366857 LINC00694P0DN24 101 aa6.77□□□□□ -1.33
CNIH4-202ENST00000366857 OR1N2Q8NGR9 330 aa6.77□□□□□ -1.33
CNIH4-202ENST00000366857 OR2K2Q8NGT1 345 aa6.77□□□□□ -1.33
CNIH4-202ENST00000366857 PGLYRP4Q96LB8 373 aa6.77□□□□□ -1.33
CNIH4-202ENST00000366857 CITED2Q99967 270 aaPredicted RBP6.77□□□□□ -1.33
CNIH4-202ENST00000366857 DNAH2Q9P225 4427 aa6.77□□□□□ -1.33
CNIH4-202ENST00000366857 APCSP02743 223 aa6.76□□□□□ -1.33
CNIH4-202ENST00000366857 TCL1AP56279 114 aa6.76□□□□□ -1.33
CNIH4-202ENST00000366857 RPS20P60866 119 aaKnown RBP6.76□□□□□ -1.33
CNIH4-202ENST00000366857 IGHV3OR16-13A0A075B7E8 117 aa6.76□□□□□ -1.33
CNIH4-202ENST00000366857 IGHV3-74A0A0B4J1X5 117 aa6.76□□□□□ -1.33
CNIH4-202ENST00000366857 MGST1P10620 155 aaKnown RBP6.76□□□□□ -1.33
CNIH4-202ENST00000366857 LINC00612Q8N6U2 182 aa6.76□□□□□ -1.33
CNIH4-202ENST00000366857 CHCHD1Q96BP2 118 aaKnown RBP6.76□□□□□ -1.33
CNIH4-202ENST00000366857 VPS13DQ5THJ4 4388 aa6.76□□□□□ -1.33
CNIH4-202ENST00000366857 HECTD4Q9Y4D8 3996 aa6.76□□□□□ -1.33
CNIH4-202ENST00000366857 NTF3P20783 257 aa6.76□□□□□ -1.33
CNIH4-202ENST00000366857 PRR27Q6MZM9 219 aa6.76□□□□□ -1.33
CNIH4-202ENST00000366857 TMEM61Q8N0U2 210 aa6.76□□□□□ -1.33
CNIH4-202ENST00000366857 TSSC4Q9Y5U2 329 aaPredicted RBP6.76□□□□□ -1.33
CNIH4-202ENST00000366857 TPRP12270 2363 aaKnown RBP6.75□□□□□ -1.33
CNIH4-202ENST00000366857 IQCJQ1A5X6 159 aa6.75□□□□□ -1.33
CNIH4-202ENST00000366857 OR10AG1Q8NH19 301 aa6.75□□□□□ -1.33
CNIH4-202ENST00000366857 C12orf57Q99622 126 aa6.75□□□□□ -1.33
CNIH4-202ENST00000366857 BMI1P35226 326 aa6.75□□□□□ -1.33
CNIH4-202ENST00000366857 ANXA2RQ3ZCQ2 193 aa6.75□□□□□ -1.33
CNIH4-202ENST00000366857 MRPL54Q6P161 138 aaKnown RBP6.75□□□□□ -1.33
CNIH4-202ENST00000366857 NAV2Q8IVL1 2488 aa6.75□□□□□ -1.33
CNIH4-202ENST00000366857 TEP1Q99973 2627 aaKnown RBP6.75□□□□□ -1.33
CNIH4-202ENST00000366857 SRIP30626 198 aa6.75□□□□□ -1.33
CNIH4-202ENST00000366857 PAFAH1B2P68402 229 aa6.75□□□□□ -1.33
CNIH4-202ENST00000366857 NDUFA11Q86Y39 141 aa6.75□□□□□ -1.33
CNIH4-202ENST00000366857 WFDC9Q8NEX5 89 aa6.75□□□□□ -1.33
CNIH4-202ENST00000366857 CMTM2Q8TAZ6 248 aa6.75□□□□□ -1.33
CNIH4-202ENST00000366857 RASL10AQ92737 203 aa6.75□□□□□ -1.33
CNIH4-202ENST00000366857 DUX5Q96PT3 197 aa6.75□□□□□ -1.33
CNIH4-202ENST00000366857 CRYGDP07320 174 aa6.74□□□□□ -1.33
CNIH4-202ENST00000366857 ZNF124Q15973 351 aa6.74□□□□□ -1.33
CNIH4-202ENST00000366857 OR2D3Q8NGH3 330 aa6.74□□□□□ -1.33
CNIH4-202ENST00000366857 FASNP49327 2511 aaKnown RBP6.74□□□□□ -1.33
CNIH4-202ENST00000366857 S100A12P80511 92 aa6.74□□□□□ -1.33
CNIH4-202ENST00000366857 K7EQM0 130 aa6.74□□□□□ -1.33
CNIH4-202ENST00000366857 CD300EQ496F6 205 aaPredicted RBP6.74□□□□□ -1.33
CNIH4-202ENST00000366857 C1orf158Q8N1D5 194 aa6.74□□□□□ -1.33
CNIH4-202ENST00000366857 ZNF664Q8N3J9 261 aa6.74□□□□□ -1.33
CNIH4-202ENST00000366857 NDUFAF3Q9BU61 184 aa6.74□□□□□ -1.33
CNIH4-202ENST00000366857 LAMTOR2Q9Y2Q5 125 aa6.74□□□□□ -1.33
CNIH4-202ENST00000366857 C9orf152Q5JTZ5 239 aa6.73□□□□□ -1.33
CNIH4-202ENST00000366857 FER1L6-AS1Q8NA97 138 aa6.73□□□□□ -1.33
CNIH4-202ENST00000366857 TMEM189A5PLL7 270 aa6.73□□□□□ -1.33
CNIH4-202ENST00000366857 M0R381 172 aa6.73□□□□□ -1.33
CNIH4-202ENST00000366857 KIAA1644Q3SXP7 199 aa6.73□□□□□ -1.33
CNIH4-202ENST00000366857 Q8N1Y9 231 aa6.73□□□□□ -1.33
CNIH4-202ENST00000366857 C16orf92Q96LL3 132 aa6.73□□□□□ -1.33
CNIH4-202ENST00000366857 TRBV6-5A0A0K0K1A5 114 aa6.73□□□□□ -1.33
CNIH4-202ENST00000366857 LINC00173Q6ZV60 143 aa6.73□□□□□ -1.33
CNIH4-202ENST00000366857 AMN1Q8IY45 258 aa6.73□□□□□ -1.33
CNIH4-202ENST00000366857 C20orf144Q9BQM9 153 aa6.73□□□□□ -1.33
CNIH4-202ENST00000366857 GNRH2O43555 120 aa6.72□□□□□ -1.33
CNIH4-202ENST00000366857 ZNF705AQ6ZN79 300 aaPredicted RBP6.72□□□□□ -1.33
CNIH4-202ENST00000366857 INAFM1C9JVW0 142 aa6.72□□□□□ -1.33
CNIH4-202ENST00000366857 CCL24O00175 119 aa6.72□□□□□ -1.33
CNIH4-202ENST00000366857 POLR2KP53803 58 aaKnown RBP6.72□□□□□ -1.33
CNIH4-202ENST00000366857 PRR31Q5SQ13 230 aa6.72□□□□□ -1.33
CNIH4-202ENST00000366857 DUX3Q96PT4 197 aa6.72□□□□□ -1.33
CNIH4-202ENST00000366857 MAST4O15021 2626 aa6.72□□□□□ -1.33
CNIH4-202ENST00000366857 FN1P02751 2386 aaKnown RBP6.72□□□□□ -1.33
CNIH4-202ENST00000366857 C7orf71A4D174 169 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms