RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 HCFC1P51610 2035 aa14□□□□□ -0.17
SMG5-201ENST00000361813 WT1P19544 449 aaPredicted RBP14□□□□□ -0.17
SMG5-201ENST00000361813 C8orf31Q8N9H6 132 aa14□□□□□ -0.17
SMG5-201ENST00000361813 ZNF625Q96I27 306 aaPredicted RBP14□□□□□ -0.17
SMG5-201ENST00000361813 LINC00310P59036 64 aa14□□□□□ -0.17
SMG5-201ENST00000361813 PRSS22Q9GZN4 317 aa14□□□□□ -0.17
SMG5-201ENST00000361813 TRGV2A0A075B6R0 118 aa13.99□□□□□ -0.17
SMG5-201ENST00000361813 TNRC6AQ8NDV7 1962 aaKnown RBP13.99□□□□□ -0.17
SMG5-201ENST00000361813 IGLV2-23P01705 113 aa13.99□□□□□ -0.17
SMG5-201ENST00000361813 LY6G5BQ8NDX9 201 aa13.99□□□□□ -0.17
SMG5-201ENST00000361813 CSPG4Q6UVK1 2322 aa13.99□□□□□ -0.17
SMG5-201ENST00000361813 G3V4G9 280 aa13.98□□□□□ -0.17
SMG5-201ENST00000361813 BPESC1Q9GZL8 116 aa13.98□□□□□ -0.17
SMG5-201ENST00000361813 LTBP2Q14767 1821 aa13.98□□□□□ -0.17
SMG5-201ENST00000361813 NUP210LQ5VU65 1888 aa13.98□□□□□ -0.17
SMG5-201ENST00000361813 KNCNA6PVL3 124 aa13.98□□□□□ -0.17
SMG5-201ENST00000361813 MORN3Q6PF18 240 aaPredicted RBP13.98□□□□□ -0.17
SMG5-201ENST00000361813 NACAE9PAV3 2078 aa13.98□□□□□ -0.17
SMG5-201ENST00000361813 SLC25A20O43772 301 aa13.98□□□□□ -0.17
SMG5-201ENST00000361813 CGB3P0DN86 165 aa13.98□□□□□ -0.17
SMG5-201ENST00000361813 CGB7P0DN87 165 aa13.98□□□□□ -0.17
SMG5-201ENST00000361813 PHLDA1Q8WV24 401 aaPredicted RBP13.98□□□□□ -0.17
SMG5-201ENST00000361813 DAZ1Q9NQZ3 744 aaKnown RBP13.97□□□□□ -0.17
SMG5-201ENST00000361813 J3QQQ9 107 aa13.97□□□□□ -0.17
SMG5-201ENST00000361813 FAM223BA6NKX1 122 aa13.97□□□□□ -0.17
SMG5-201ENST00000361813 FAM223AQ8IWN6 122 aa13.97□□□□□ -0.17
SMG5-201ENST00000361813 TMEM141Q96I45 108 aa13.97□□□□□ -0.17
SMG5-201ENST00000361813 MLST8Q9BVC4 326 aa13.97□□□□□ -0.17
SMG5-201ENST00000361813 NCKAP5O14513 1909 aa13.96□□□□□ -0.17
SMG5-201ENST00000361813 A0A1W2PNU3 283 aaPredicted RBP13.96□□□□□ -0.17
SMG5-201ENST00000361813 INS-IGF2F8WCM5 200 aa13.96□□□□□ -0.17
SMG5-201ENST00000361813 KLHL30-AS1Q8NEE0 82 aa13.96□□□□□ -0.17
SMG5-201ENST00000361813 KIAA1549Q9HCM3 1950 aa13.96□□□□□ -0.18
SMG5-201ENST00000361813 USMG5Q96IX5 58 aa13.96□□□□□ -0.18
SMG5-201ENST00000361813 F6UB75 175 aa13.95□□□□□ -0.18
SMG5-201ENST00000361813 H3BMM0 161 aa13.95□□□□□ -0.18
SMG5-201ENST00000361813 IGFL3Q6UXB1 125 aa13.95□□□□□ -0.18
SMG5-201ENST00000361813 UBE2WQ96B02 151 aa13.95□□□□□ -0.18
SMG5-201ENST00000361813 C1orf159Q96HA4 380 aa13.95□□□□□ -0.18
SMG5-201ENST00000361813 C20orf78Q9BR46 151 aa13.95□□□□□ -0.18
SMG5-201ENST00000361813 ATRXP46100 2492 aa13.95□□□□□ -0.18
SMG5-201ENST00000361813 RUSC1-AS1Q66K80 236 aa13.95□□□□□ -0.18
SMG5-201ENST00000361813 SPINK13Q1W4C9 94 aa13.95□□□□□ -0.18
SMG5-201ENST00000361813 KLK9Q9UKQ9 250 aa13.95□□□□□ -0.18
SMG5-201ENST00000361813 TEX22C9J3V5 150 aa13.95□□□□□ -0.18
SMG5-201ENST00000361813 GNRH2O43555 120 aa13.95□□□□□ -0.18
SMG5-201ENST00000361813 TRPT1Q86TN4 253 aaKnown RBP13.95□□□□□ -0.18
SMG5-201ENST00000361813 Q8N7P7 452 aa13.95□□□□□ -0.18
SMG5-201ENST00000361813 ADARB2-AS1A8MUL3 147 aa13.94□□□□□ -0.18
SMG5-201ENST00000361813 PRAC2D3DTV9 90 aa13.94□□□□□ -0.18
SMG5-201ENST00000361813 UBE2E1P51965 193 aa13.94□□□□□ -0.18
SMG5-201ENST00000361813 ODF1Q14990 250 aa13.94□□□□□ -0.18
SMG5-201ENST00000361813 NTN5Q8WTR8 489 aaPredicted RBP13.94□□□□□ -0.18
SMG5-201ENST00000361813 RPL39LQ96EH5 51 aaKnown RBP13.94□□□□□ -0.18
SMG5-201ENST00000361813 TRAV13-1A0A0B4J241 112 aa13.94□□□□□ -0.18
SMG5-201ENST00000361813 LINC00158P58513 81 aa13.94□□□□□ -0.18
SMG5-201ENST00000361813 SHISA9B4DS77 424 aa13.94□□□□□ -0.18
SMG5-201ENST00000361813 CRYGCP07315 174 aa13.94□□□□□ -0.18
SMG5-201ENST00000361813 C1QTNF4Q9BXJ3 329 aa13.94□□□□□ -0.18
SMG5-201ENST00000361813 CACNA1AO00555 2505 aa13.94□□□□□ -0.18
SMG5-201ENST00000361813 TRAV12-2A0A075B6T6 113 aa13.93□□□□□ -0.18
SMG5-201ENST00000361813 HIGD1BQ9P298 99 aa13.93□□□□□ -0.18
SMG5-201ENST00000361813 RBMY1BA6NDE4 496 aaKnown RBP13.93□□□□□ -0.18
SMG5-201ENST00000361813 RBMY1EA6NEQ0 496 aaKnown RBP13.93□□□□□ -0.18
SMG5-201ENST00000361813 CTSGP08311 255 aa13.93□□□□□ -0.18
SMG5-201ENST00000361813 RBMY1DP0C7P1 496 aaKnown RBP13.93□□□□□ -0.18
SMG5-201ENST00000361813 RBMY1A1P0DJD3 496 aaKnown RBP13.93□□□□□ -0.18
SMG5-201ENST00000361813 RBMY1CP0DJD4 496 aa13.93□□□□□ -0.18
SMG5-201ENST00000361813 SPRY4Q9C004 299 aa13.93□□□□□ -0.18
SMG5-201ENST00000361813 A0A1W2PRX2 142 aa13.93□□□□□ -0.18
SMG5-201ENST00000361813 SEM1Q6ZVN7 128 aa13.92□□□□□ -0.18
SMG5-201ENST00000361813 PRIMA1Q86XR5 153 aa13.92□□□□□ -0.18
SMG5-201ENST00000361813 PTPN13Q12923 2485 aa13.92□□□□□ -0.18
SMG5-201ENST00000361813 IGHV3-53P01767 116 aa13.91□□□□□ -0.18
SMG5-201ENST00000361813 STHQ8IWL8 128 aa13.91□□□□□ -0.18
SMG5-201ENST00000361813 MUC22E2RYF6 1773 aaPredicted RBP13.91□□□□□ -0.18
SMG5-201ENST00000361813 C11orf44Q8N8P7 122 aa13.91□□□□□ -0.18
SMG5-201ENST00000361813 IGLV11-55A0A075B6I3 123 aa13.91□□□□□ -0.18
SMG5-201ENST00000361813 B5MCH6 92 aa13.9□□□□□ -0.18
SMG5-201ENST00000361813 PLA2G2CQ5R387 149 aa13.9□□□□□ -0.18
SMG5-201ENST00000361813 PEMTQ9UBM1 199 aa13.9□□□□□ -0.18
SMG5-201ENST00000361813 NDUFA12Q9UI09 145 aa13.9□□□□□ -0.18
SMG5-201ENST00000361813 SYNJ2BPP57105 145 aa13.9□□□□□ -0.18
SMG5-201ENST00000361813 GATD1Q8NB37 220 aa13.9□□□□□ -0.18
SMG5-201ENST00000361813 ZNF493Q6ZR52 646 aa13.9□□□□□ -0.19
SMG5-201ENST00000361813 LY6DQ14210 128 aa13.89□□□□□ -0.19
SMG5-201ENST00000361813 PIP4P2Q8N4L2 257 aa13.89□□□□□ -0.19
SMG5-201ENST00000361813 IGLV1-47P01700 117 aa13.89□□□□□ -0.19
SMG5-201ENST00000361813 CRPP02741 224 aa13.89□□□□□ -0.19
SMG5-201ENST00000361813 RASL10AQ92737 203 aa13.89□□□□□ -0.19
SMG5-201ENST00000361813 TRGV1A0A0A0MS02 117 aa13.89□□□□□ -0.19
SMG5-201ENST00000361813 I3L3M4 83 aa13.89□□□□□ -0.19
SMG5-201ENST00000361813 CHCHD5Q9BSY4 110 aa13.89□□□□□ -0.19
SMG5-201ENST00000361813 CFC1BP0CG36 223 aa13.88□□□□□ -0.19
SMG5-201ENST00000361813 CFC1P0CG37 223 aa13.88□□□□□ -0.19
SMG5-201ENST00000361813 RNASE13Q5GAN3 156 aaKnown RBP13.88□□□□□ -0.19
SMG5-201ENST00000361813 PAX4O43316 350 aa13.88□□□□□ -0.19
SMG5-201ENST00000361813 IFITM1P13164 125 aa13.88□□□□□ -0.19
SMG5-201ENST00000361813 GAGE2AQ6NT46 116 aa13.88□□□□□ -0.19
SMG5-201ENST00000361813 COX6B1P14854 86 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms