RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 GATD1Q8NB37 220 aa10.53□□□□□ -0.72
LDB3-202ENST00000361373 GPHB5Q86YW7 130 aa10.53□□□□□ -0.72
LDB3-202ENST00000361373 DEFB104AQ8WTQ1 72 aa10.53□□□□□ -0.72
LDB3-202ENST00000361373 F8WEM9 126 aa10.52□□□□□ -0.73
LDB3-202ENST00000361373 HLA-DRB4P13762 266 aa10.52□□□□□ -0.73
LDB3-202ENST00000361373 HLA-DRB4X5D2U9 266 aa10.52□□□□□ -0.73
LDB3-202ENST00000361373 BUB3O43684 328 aa10.52□□□□□ -0.73
LDB3-202ENST00000361373 LINC00574Q9H8X3 128 aa10.52□□□□□ -0.73
LDB3-202ENST00000361373 IGHV1-24A0A0C4DH33 117 aa10.51□□□□□ -0.73
LDB3-202ENST00000361373 GP9P14770 177 aa10.51□□□□□ -0.73
LDB3-202ENST00000361373 TMEM95Q3KNT9 176 aa10.51□□□□□ -0.73
LDB3-202ENST00000361373 DNAJC30Q96LL9 226 aa10.51□□□□□ -0.73
LDB3-202ENST00000361373 EREGO14944 169 aa10.51□□□□□ -0.73
LDB3-202ENST00000361373 ZNF48Q96MX3 618 aaPredicted RBP10.51□□□□□ -0.73
LDB3-202ENST00000361373 TNFRSF13BO14836 293 aaPredicted RBP10.51□□□□□ -0.73
LDB3-202ENST00000361373 MSMPQ1L6U9 139 aa10.51□□□□□ -0.73
LDB3-202ENST00000361373 SH2D6Q7Z4S9 175 aa10.51□□□□□ -0.73
LDB3-202ENST00000361373 PYY3Q5JQD4 70 aa10.51□□□□□ -0.73
LDB3-202ENST00000361373 CLPSL1A2RUU4 121 aa10.5□□□□□ -0.73
LDB3-202ENST00000361373 IGLV2-23P01705 113 aa10.5□□□□□ -0.73
LDB3-202ENST00000361373 LGALS9BQ3B8N2 356 aa10.5□□□□□ -0.73
LDB3-202ENST00000361373 LGALS9CQ6DKI2 356 aa10.5□□□□□ -0.73
LDB3-202ENST00000361373 WIPF2Q8TF74 440 aaPredicted RBP10.5□□□□□ -0.73
LDB3-202ENST00000361373 SLURP1P55000 103 aa10.5□□□□□ -0.73
LDB3-202ENST00000361373 C17orf77Q96MU5 243 aa10.5□□□□□ -0.73
LDB3-202ENST00000361373 CSPG4Q6UVK1 2322 aa10.5□□□□□ -0.73
LDB3-202ENST00000361373 ATRXP46100 2492 aa10.5□□□□□ -0.73
LDB3-202ENST00000361373 HERVK_113P63121 156 aa10.5□□□□□ -0.73
LDB3-202ENST00000361373 DEFB136Q30KP8 78 aa10.5□□□□□ -0.73
LDB3-202ENST00000361373 TEX22C9J3V5 150 aa10.49□□□□□ -0.73
LDB3-202ENST00000361373 NRGNQ92686 78 aa10.49□□□□□ -0.73
LDB3-202ENST00000361373 SIGLEC8Q9NYZ4 499 aa10.49□□□□□ -0.73
LDB3-202ENST00000361373 COL4A3Q01955 1670 aa10.49□□□□□ -0.73
LDB3-202ENST00000361373 LMO4P61968 165 aa10.49□□□□□ -0.73
LDB3-202ENST00000361373 GAGE6Q13070 117 aa10.49□□□□□ -0.73
LDB3-202ENST00000361373 C16orf74Q96GX8 76 aa10.49□□□□□ -0.73
LDB3-202ENST00000361373 U3KQE9 123 aa10.49□□□□□ -0.73
LDB3-202ENST00000361373 ADAMTS9Q9P2N4 1935 aa10.49□□□□□ -0.73
LDB3-202ENST00000361373 WISP2O76076 250 aa10.49□□□□□ -0.73
LDB3-202ENST00000361373 DLX4Q92988 240 aaPredicted RBP10.49□□□□□ -0.73
LDB3-202ENST00000361373 WI2-2373I1.2A0A1W2PRP0 233 aa10.49□□□□□ -0.73
LDB3-202ENST00000361373 INSL3P51460 131 aa10.49□□□□□ -0.73
LDB3-202ENST00000361373 KLF5Q13887 457 aaPredicted RBP10.49□□□□□ -0.73
LDB3-202ENST00000361373 ODF3L1Q8IXM7 274 aa10.49□□□□□ -0.73
LDB3-202ENST00000361373 A6NDX4 124 aa10.48□□□□□ -0.73
LDB3-202ENST00000361373 F6UB75 175 aa10.48□□□□□ -0.73
LDB3-202ENST00000361373 RITA1Q96K30 269 aa10.48□□□□□ -0.73
LDB3-202ENST00000361373 IGF2BP2-AS1Q96M15 143 aa10.48□□□□□ -0.73
LDB3-202ENST00000361373 F8VRH5 84 aa10.48□□□□□ -0.73
LDB3-202ENST00000361373 NPYP01303 97 aa10.48□□□□□ -0.73
LDB3-202ENST00000361373 EGR2P11161 476 aaPredicted RBP10.48□□□□□ -0.73
LDB3-202ENST00000361373 NPC2P61916 151 aa10.48□□□□□ -0.73
LDB3-202ENST00000361373 C20orf144Q9BQM9 153 aa10.48□□□□□ -0.73
LDB3-202ENST00000361373 KLF12Q9Y4X4 402 aa10.48□□□□□ -0.73
LDB3-202ENST00000361373 HLA-DMBP28068 263 aa10.48□□□□□ -0.73
LDB3-202ENST00000361373 OBSL1O75147 1896 aa10.48□□□□□ -0.73
LDB3-202ENST00000361373 NOP10Q9NPE3 64 aaKnown RBP10.48□□□□□ -0.73
LDB3-202ENST00000361373 LAMTOR3Q9UHA4 124 aa10.48□□□□□ -0.73
LDB3-202ENST00000361373 C2orf70A6NJV1 201 aa10.47□□□□□ -0.73
LDB3-202ENST00000361373 MPV17L2Q567V2 206 aa10.47□□□□□ -0.73
LDB3-202ENST00000361373 PKIGQ9Y2B9 76 aa10.47□□□□□ -0.73
LDB3-202ENST00000361373 TMEM131Q92545 1883 aa10.47□□□□□ -0.73
LDB3-202ENST00000361373 A0A087X0K7 114 aa10.47□□□□□ -0.73
LDB3-202ENST00000361373 TRAV8-4A0A0B4J246 113 aa10.47□□□□□ -0.73
LDB3-202ENST00000361373 C10orf142B7Z368 130 aa10.47□□□□□ -0.73
LDB3-202ENST00000361373 CD5LO43866 347 aa10.47□□□□□ -0.73
LDB3-202ENST00000361373 SPART-AS1P0CW21 52 aa10.47□□□□□ -0.73
LDB3-202ENST00000361373 C4orf3Q8WVX3 66 aa10.47□□□□□ -0.73
LDB3-202ENST00000361373 EML6Q6ZMW3 1958 aa10.47□□□□□ -0.73
LDB3-202ENST00000361373 PTPN13Q12923 2485 aa10.47□□□□□ -0.73
LDB3-202ENST00000361373 FREM1Q5H8C1 2179 aa10.47□□□□□ -0.73
LDB3-202ENST00000361373 ZNF106Q9H2Y7 1883 aaKnown RBP10.46□□□□□ -0.73
LDB3-202ENST00000361373 TRAV26-2A0A0B4J265 109 aa10.46□□□□□ -0.73
LDB3-202ENST00000361373 CGB3P0DN86 165 aa10.46□□□□□ -0.73
LDB3-202ENST00000361373 CGB7P0DN87 165 aa10.46□□□□□ -0.73
LDB3-202ENST00000361373 PATE2Q6UY27 113 aa10.46□□□□□ -0.73
LDB3-202ENST00000361373 PIFOQ8TCI5 191 aa10.46□□□□□ -0.73
LDB3-202ENST00000361373 STPG4Q8N801 248 aa10.46□□□□□ -0.74
LDB3-202ENST00000361373 IGHV4OR15-8A0A075B7B6 117 aa10.46□□□□□ -0.74
LDB3-202ENST00000361373 A0A087WW49 117 aa10.46□□□□□ -0.74
LDB3-202ENST00000361373 IGHV3-38A0A0C4DH36 116 aa10.45□□□□□ -0.74
LDB3-202ENST00000361373 GNRH2O43555 120 aa10.45□□□□□ -0.74
LDB3-202ENST00000361373 ANGP03950 147 aaKnown RBP10.45□□□□□ -0.74
LDB3-202ENST00000361373 CFHR4Q92496 578 aa10.45□□□□□ -0.74
LDB3-202ENST00000361373 ODF3BA8MYP8 253 aa10.45□□□□□ -0.74
LDB3-202ENST00000361373 ATP5G1P05496 136 aa10.45□□□□□ -0.74
LDB3-202ENST00000361373 NKAPP1Q8N9T2 125 aa10.45□□□□□ -0.74
LDB3-202ENST00000361373 MEGF9Q9H1U4 602 aa10.45□□□□□ -0.74
LDB3-202ENST00000361373 NDUFA12Q9UI09 145 aa10.45□□□□□ -0.74
LDB3-202ENST00000361373 KIR3DS1Q14943 382 aa10.45□□□□□ -0.74
LDB3-202ENST00000361373 NCKAP5O14513 1909 aa10.44□□□□□ -0.74
LDB3-202ENST00000361373 MRPL23Q16540 153 aaKnown RBP10.44□□□□□ -0.74
LDB3-202ENST00000361373 C2orf82Q6UX34 121 aa10.44□□□□□ -0.74
LDB3-202ENST00000361373 SPANXA1Q9NS26 97 aa10.44□□□□□ -0.74
LDB3-202ENST00000361373 VWC2LB2RUY7 222 aa10.44□□□□□ -0.74
LDB3-202ENST00000361373 K7EN84 100 aa10.44□□□□□ -0.74
LDB3-202ENST00000361373 COL4A4P53420 1690 aaPredicted RBP10.44□□□□□ -0.74
LDB3-202ENST00000361373 C9orf47Q6ZRZ4 202 aa10.44□□□□□ -0.74
LDB3-202ENST00000361373 CDK2AP2O75956 126 aa10.44□□□□□ -0.74
LDB3-202ENST00000361373 A0A1B0GV72 72 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms