RNA–Protein interactions for RNA: ENST00000360859.10

COL9A1-203, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-203ENST00000360859 ATP5SQ99766 215 aa11.64□□□□□ -0.55
COL9A1-203ENST00000360859 OTORQ9NRC9 128 aa11.64□□□□□ -0.55
COL9A1-203ENST00000360859 FLG2Q5D862 2391 aaPredicted RBP11.63□□□□□ -0.55
COL9A1-203ENST00000360859 TRAV21A0A0B4J279 112 aa11.63□□□□□ -0.55
COL9A1-203ENST00000360859 PGPA6NDG6 321 aa11.63□□□□□ -0.55
COL9A1-203ENST00000360859 IBA57-AS1B1ANH7 110 aa11.63□□□□□ -0.55
COL9A1-203ENST00000360859 EIF3GO75821 320 aaKnown RBP eCLIP11.63□□□□□ -0.55
COL9A1-203ENST00000360859 TYMSP04818 313 aa11.63□□□□□ -0.55
COL9A1-203ENST00000360859 TAS2R45P59539 299 aa11.63□□□□□ -0.55
COL9A1-203ENST00000360859 ASAH1Q13510 395 aa11.63□□□□□ -0.55
COL9A1-203ENST00000360859 Q6ZSN1 163 aa11.63□□□□□ -0.55
COL9A1-203ENST00000360859 CMTM2Q8TAZ6 248 aa11.63□□□□□ -0.55
COL9A1-203ENST00000360859 RPH3ALQ9UNE2 315 aa11.63□□□□□ -0.55
COL9A1-203ENST00000360859 GOLT1AQ6ZVE7 132 aa11.62□□□□□ -0.55
COL9A1-203ENST00000360859 Q8N814 137 aa11.62□□□□□ -0.55
COL9A1-203ENST00000360859 TVP23CQ96ET8 276 aa11.62□□□□□ -0.55
COL9A1-203ENST00000360859 MBD2Q9UBB5 411 aa11.62□□□□□ -0.55
COL9A1-203ENST00000360859 F6UZH7 168 aa11.61□□□□□ -0.55
COL9A1-203ENST00000360859 CYCSP99999 105 aaKnown RBP11.61□□□□□ -0.55
COL9A1-203ENST00000360859 Q9HAA7 133 aa11.61□□□□□ -0.55
COL9A1-203ENST00000360859 SDF2L1Q9HCN8 221 aa11.61□□□□□ -0.55
COL9A1-203ENST00000360859 TREM1Q9NP99 234 aa11.61□□□□□ -0.55
COL9A1-203ENST00000360859 TRAV8-1A0A0A6YYK1 113 aa11.6□□□□□ -0.55
COL9A1-203ENST00000360859 TRAV8-6A0A0B4J262 113 aa11.6□□□□□ -0.55
COL9A1-203ENST00000360859 FBLL1A6NHQ2 334 aaKnown RBP11.6□□□□□ -0.55
COL9A1-203ENST00000360859 PFN1P07737 140 aaKnown RBP11.6□□□□□ -0.55
COL9A1-203ENST00000360859 FAM74A1Q5RGS3 127 aa11.6□□□□□ -0.55
COL9A1-203ENST00000360859 SLC25A29Q8N8R3 303 aa11.6□□□□□ -0.55
COL9A1-203ENST00000360859 SCGB1C1Q8TD33 95 aa11.6□□□□□ -0.55
COL9A1-203ENST00000360859 HSPB11Q9Y547 144 aa11.6□□□□□ -0.55
COL9A1-203ENST00000360859 H2BFSP57053 126 aa11.59□□□□□ -0.55
COL9A1-203ENST00000360859 OR10J3Q5JRS4 329 aa11.59□□□□□ -0.55
COL9A1-203ENST00000360859 ARL6IP6Q8N6S5 226 aa11.59□□□□□ -0.55
COL9A1-203ENST00000360859 ENKURQ8TC29 256 aa11.59□□□□□ -0.55
COL9A1-203ENST00000360859 PPP1R1CQ8WVI7 109 aa11.59□□□□□ -0.55
COL9A1-203ENST00000360859 ASB13Q8WXK3 278 aa11.59□□□□□ -0.55
COL9A1-203ENST00000360859 KCNS1Q96KK3 526 aa11.59□□□□□ -0.55
COL9A1-203ENST00000360859 SMIM3Q9BZL3 60 aa11.59□□□□□ -0.55
COL9A1-203ENST00000360859 FAM30AQ9NZY2 134 aa11.59□□□□□ -0.55
COL9A1-203ENST00000360859 NDUFA13Q9P0J0 144 aa11.59□□□□□ -0.55
COL9A1-203ENST00000360859 BOLA1Q9Y3E2 137 aa11.59□□□□□ -0.55
COL9A1-203ENST00000360859 IGHV3-30P01768 117 aa11.58□□□□□ -0.56
COL9A1-203ENST00000360859 IGHV3-33P01772 117 aa11.58□□□□□ -0.56
COL9A1-203ENST00000360859 IGHV3-30-3P0DP02 117 aa11.58□□□□□ -0.56
COL9A1-203ENST00000360859 IGHV3-30-5P0DP03 117 aa11.58□□□□□ -0.56
COL9A1-203ENST00000360859 GNG5P63218 68 aa11.58□□□□□ -0.56
COL9A1-203ENST00000360859 ZNF876PQ49A33 203 aa11.58□□□□□ -0.56
COL9A1-203ENST00000360859 CFAP126Q5VTH2 177 aa11.58□□□□□ -0.56
COL9A1-203ENST00000360859 PRADC1Q9BSG0 188 aa11.58□□□□□ -0.56
COL9A1-203ENST00000360859 RS1O15537 224 aa11.57□□□□□ -0.56
COL9A1-203ENST00000360859 LELP1Q5T871 98 aa11.57□□□□□ -0.56
COL9A1-203ENST00000360859 DPPA3Q6W0C5 159 aa11.57□□□□□ -0.56
COL9A1-203ENST00000360859 PQLC2Q6ZP29 291 aa11.57□□□□□ -0.56
COL9A1-203ENST00000360859 IGHV3-73A0A0B4J1V6 119 aa11.56□□□□□ -0.56
COL9A1-203ENST00000360859 TRBV6-4A0A1B0GX49 114 aa11.56□□□□□ -0.56
COL9A1-203ENST00000360859 MPC2O95563 127 aa11.56□□□□□ -0.56
COL9A1-203ENST00000360859 RPL12P30050 165 aaKnown RBP11.56□□□□□ -0.56
COL9A1-203ENST00000360859 RHOHQ15669 191 aa11.56□□□□□ -0.56
COL9A1-203ENST00000360859 SGK494Q96LW2 274 aa11.56□□□□□ -0.56
COL9A1-203ENST00000360859 C11orf21Q9P2W6 132 aa11.56□□□□□ -0.56
COL9A1-203ENST00000360859 A0A1W2PPV4 95 aa11.55□□□□□ -0.56
COL9A1-203ENST00000360859 CIDEAO60543 219 aa11.55□□□□□ -0.56
COL9A1-203ENST00000360859 C1QBP02746 253 aa11.55□□□□□ -0.56
COL9A1-203ENST00000360859 ZNF80P51504 273 aaPredicted RBP11.55□□□□□ -0.56
COL9A1-203ENST00000360859 ACOT6Q3I5F7 207 aaPredicted RBP11.55□□□□□ -0.56
COL9A1-203ENST00000360859 LINC00299Q6ZSB3 139 aa11.55□□□□□ -0.56
COL9A1-203ENST00000360859 WFDC1Q9HC57 220 aa11.55□□□□□ -0.56
COL9A1-203ENST00000360859 INMT-MINDY4F8WBC2 141 aa11.54□□□□□ -0.56
COL9A1-203ENST00000360859 J3QL48 77 aa11.54□□□□□ -0.56
COL9A1-203ENST00000360859 HMGB3O15347 200 aaKnown RBP11.54□□□□□ -0.56
COL9A1-203ENST00000360859 PET100P0DJ07 73 aa11.54□□□□□ -0.56
COL9A1-203ENST00000360859 RAB2AP61019 212 aa11.54□□□□□ -0.56
COL9A1-203ENST00000360859 WFDC2Q14508 124 aa11.54□□□□□ -0.56
COL9A1-203ENST00000360859 LAGE3Q14657 143 aa11.54□□□□□ -0.56
COL9A1-203ENST00000360859 ATP6V0E2Q8NHE4 81 aa11.54□□□□□ -0.56
COL9A1-203ENST00000360859 S100ZQ8WXG8 99 aa11.54□□□□□ -0.56
COL9A1-203ENST00000360859 C9orf85Q96MD7 179 aa11.54□□□□□ -0.56
COL9A1-203ENST00000360859 NDFIP1Q9BT67 221 aa11.54□□□□□ -0.56
COL9A1-203ENST00000360859 GTSF1LQ9H1H1 148 aa11.54□□□□□ -0.56
COL9A1-203ENST00000360859 PGPEP1LA6NFU8 196 aa11.53□□□□□ -0.56
COL9A1-203ENST00000360859 UPK1BO75841 260 aa11.53□□□□□ -0.56
COL9A1-203ENST00000360859 TM2D2Q9BX73 214 aa11.53□□□□□ -0.56
COL9A1-203ENST00000360859 TAAR5O14804 337 aa11.52□□□□□ -0.57
COL9A1-203ENST00000360859 MGST1P10620 155 aaKnown RBP11.52□□□□□ -0.57
COL9A1-203ENST00000360859 ZNF506Q5JVG8 444 aa11.52□□□□□ -0.57
COL9A1-203ENST00000360859 Q6ZSA8 131 aa11.52□□□□□ -0.57
COL9A1-203ENST00000360859 Q8N3U1 123 aa11.52□□□□□ -0.57
COL9A1-203ENST00000360859 TMEM75Q8N9X5 138 aa11.52□□□□□ -0.57
COL9A1-203ENST00000360859 OR10G9Q8NGN4 311 aa11.52□□□□□ -0.57
COL9A1-203ENST00000360859 OR10G7Q8NGN6 311 aa11.52□□□□□ -0.57
COL9A1-203ENST00000360859 PTH2Q96A98 100 aa11.52□□□□□ -0.57
COL9A1-203ENST00000360859 SERTM2A0A1B0GWG4 89 aa11.51□□□□□ -0.57
COL9A1-203ENST00000360859 GCGP01275 180 aa11.51□□□□□ -0.57
COL9A1-203ENST00000360859 TCRAP04437 139 aa11.51□□□□□ -0.57
COL9A1-203ENST00000360859 ARL14EPLP0DKL9 152 aa11.51□□□□□ -0.57
COL9A1-203ENST00000360859 IFITM3Q01628 133 aa11.51□□□□□ -0.57
COL9A1-203ENST00000360859 MARVELD1Q9BSK0 173 aa11.51□□□□□ -0.57
COL9A1-203ENST00000360859 SSNA1O43805 119 aa11.5□□□□□ -0.57
COL9A1-203ENST00000360859 PLA2G1BP04054 148 aaKnown RBP11.5□□□□□ -0.57
COL9A1-203ENST00000360859 RNASE3P12724 160 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms