RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 SMIM2Q9BVW6 85 aa12.77□□□□□ -0.37
SCAF1-201ENST00000360565 KLK9Q9UKQ9 250 aa12.77□□□□□ -0.37
SCAF1-201ENST00000360565 TRAV12-2A0A075B6T6 113 aa12.77□□□□□ -0.37
SCAF1-201ENST00000360565 IGHV4-39P01824 125 aa12.76□□□□□ -0.37
SCAF1-201ENST00000360565 Q8N9W7 124 aa12.76□□□□□ -0.37
SCAF1-201ENST00000360565 CFHR4Q92496 578 aa12.76□□□□□ -0.37
SCAF1-201ENST00000360565 TRGV1A0A0A0MS02 117 aa12.76□□□□□ -0.37
SCAF1-201ENST00000360565 TRGV4A0A0C4DH28 118 aa12.76□□□□□ -0.37
SCAF1-201ENST00000360565 GATA3P23771 443 aa12.76□□□□□ -0.37
SCAF1-201ENST00000360565 ZNF415Q09FC8 603 aa12.76□□□□□ -0.37
SCAF1-201ENST00000360565 CHD7Q9P2D1 2997 aa12.76□□□□□ -0.37
SCAF1-201ENST00000360565 BVES-AS1Q5T3Y7 98 aa12.76□□□□□ -0.37
SCAF1-201ENST00000360565 SDHAF1A6NFY7 115 aa12.75□□□□□ -0.37
SCAF1-201ENST00000360565 IGLV2-8P01709 118 aa12.75□□□□□ -0.37
SCAF1-201ENST00000360565 IGHV3-53P01767 116 aa12.75□□□□□ -0.37
SCAF1-201ENST00000360565 RNASE1P07998 156 aaKnown RBP12.75□□□□□ -0.37
SCAF1-201ENST00000360565 PGPEP1Q9NXJ5 209 aa12.75□□□□□ -0.37
SCAF1-201ENST00000360565 ERG28Q9UKR5 140 aa12.75□□□□□ -0.37
SCAF1-201ENST00000360565 TTC32Q5I0X7 151 aa12.75□□□□□ -0.37
SCAF1-201ENST00000360565 BUB3O43684 328 aa12.74□□□□□ -0.37
SCAF1-201ENST00000360565 TRAV8-2A0A0B4J237 113 aa12.74□□□□□ -0.37
SCAF1-201ENST00000360565 IGHV4-61A0A0C4DH41 118 aa12.74□□□□□ -0.37
SCAF1-201ENST00000360565 ZFP36P26651 326 aaKnown RBP12.74□□□□□ -0.37
SCAF1-201ENST00000360565 PHLDA1Q8WV24 401 aaPredicted RBP12.74□□□□□ -0.37
SCAF1-201ENST00000360565 TMEM238C9JI98 176 aa12.74□□□□□ -0.37
SCAF1-201ENST00000360565 NPC2P61916 151 aa12.74□□□□□ -0.37
SCAF1-201ENST00000360565 SAP30O75446 220 aa12.74□□□□□ -0.37
SCAF1-201ENST00000360565 PLEKHB2Q96CS7 222 aa12.74□□□□□ -0.37
SCAF1-201ENST00000360565 A8MWV9 139 aa12.73□□□□□ -0.37
SCAF1-201ENST00000360565 SPXQ9BT56 116 aa12.73□□□□□ -0.37
SCAF1-201ENST00000360565 HIVEP2P31629 2446 aa12.73□□□□□ -0.37
SCAF1-201ENST00000360565 IGHV7-4-1A0A0J9YVY3 117 aa12.73□□□□□ -0.37
SCAF1-201ENST00000360565 FANCD2OSQ96PS1 177 aa12.73□□□□□ -0.37
SCAF1-201ENST00000360565 CST9LQ9H4G1 147 aa12.73□□□□□ -0.37
SCAF1-201ENST00000360565 LINC00322Q6ZN03 302 aaPredicted RBP12.73□□□□□ -0.37
SCAF1-201ENST00000360565 C5orf42Q9H799 3197 aa12.73□□□□□ -0.37
SCAF1-201ENST00000360565 PRAC2D3DTV9 90 aa12.72□□□□□ -0.37
SCAF1-201ENST00000360565 HTN3P15516 51 aa12.72□□□□□ -0.37
SCAF1-201ENST00000360565 NSUN5P1Q3KNT7 163 aa12.72□□□□□ -0.37
SCAF1-201ENST00000360565 SP5Q6BEB4 398 aaPredicted RBP12.72□□□□□ -0.37
SCAF1-201ENST00000360565 HTTP42858 3142 aa12.72□□□□□ -0.37
SCAF1-201ENST00000360565 F8VRH5 84 aa12.72□□□□□ -0.37
SCAF1-201ENST00000360565 BLCAPP62952 87 aa12.72□□□□□ -0.37
SCAF1-201ENST00000360565 GAGE1Q13065 139 aa12.72□□□□□ -0.37
SCAF1-201ENST00000360565 TCTEX1D4Q5JR98 221 aa12.72□□□□□ -0.37
SCAF1-201ENST00000360565 CHCHD5Q9BSY4 110 aa12.72□□□□□ -0.37
SCAF1-201ENST00000360565 GNRH2O43555 120 aa12.72□□□□□ -0.37
SCAF1-201ENST00000360565 RPL36AP83881 106 aaKnown RBP12.72□□□□□ -0.37
SCAF1-201ENST00000360565 RPL36ALQ969Q0 106 aaKnown RBP12.72□□□□□ -0.37
SCAF1-201ENST00000360565 DSCAMO60469 2012 aa12.72□□□□□ -0.37
SCAF1-201ENST00000360565 WI2-2373I1.2A0A1W2PRP0 233 aa12.71□□□□□ -0.37
SCAF1-201ENST00000360565 PCP2Q8IVA1 136 aa12.71□□□□□ -0.37
SCAF1-201ENST00000360565 IGHV1OR15-1A0A075B7D0 117 aa12.71□□□□□ -0.37
SCAF1-201ENST00000360565 TRPT1Q86TN4 253 aaKnown RBP12.71□□□□□ -0.37
SCAF1-201ENST00000360565 C1orf159Q96HA4 380 aa12.71□□□□□ -0.37
SCAF1-201ENST00000360565 ATG2AQ2TAZ0 1938 aa12.71□□□□□ -0.37
SCAF1-201ENST00000360565 C9orf118A6NHY6 69 aa12.71□□□□□ -0.37
SCAF1-201ENST00000360565 CDKN1BP46527 198 aa12.71□□□□□ -0.37
SCAF1-201ENST00000360565 MKI67P46013 3256 aaKnown RBP12.71□□□□□ -0.38
SCAF1-201ENST00000360565 TRBV7-9A0A0J9YWB2 115 aa12.71□□□□□ -0.38
SCAF1-201ENST00000360565 C19orf71A6NCJ1 209 aa12.71□□□□□ -0.38
SCAF1-201ENST00000360565 PAX2Q02962 417 aa12.71□□□□□ -0.38
SCAF1-201ENST00000360565 XCL2Q9UBD3 114 aa12.71□□□□□ -0.38
SCAF1-201ENST00000360565 TMEM95Q3KNT9 176 aa12.7□□□□□ -0.38
SCAF1-201ENST00000360565 SIGMAR1Q99720 223 aa12.7□□□□□ -0.38
SCAF1-201ENST00000360565 ADARB2-AS1A8MUL3 147 aa12.7□□□□□ -0.38
SCAF1-201ENST00000360565 ANKRD39Q53RE8 183 aa12.7□□□□□ -0.38
SCAF1-201ENST00000360565 OCIAD2Q56VL3 154 aa12.7□□□□□ -0.38
SCAF1-201ENST00000360565 INSP01308 110 aa12.7□□□□□ -0.38
SCAF1-201ENST00000360565 IGHV4-38-2P0DP08 117 aa12.7□□□□□ -0.38
SCAF1-201ENST00000360565 FBXL19-AS1Q494R0 122 aa12.7□□□□□ -0.38
SCAF1-201ENST00000360565 PRADC1Q9BSG0 188 aa12.7□□□□□ -0.38
SCAF1-201ENST00000360565 DSCAML1Q8TD84 2053 aa12.69□□□□□ -0.38
SCAF1-201ENST00000360565 PMVKQ15126 192 aa12.69□□□□□ -0.38
SCAF1-201ENST00000360565 DLX4Q92988 240 aaPredicted RBP12.69□□□□□ -0.38
SCAF1-201ENST00000360565 RANBP2P49792 3224 aaKnown RBP12.69□□□□□ -0.38
SCAF1-201ENST00000360565 A0A1B0GV72 72 aa12.69□□□□□ -0.38
SCAF1-201ENST00000360565 RBAKDNA6NC62 111 aa12.69□□□□□ -0.38
SCAF1-201ENST00000360565 IGHV4-59P01825 116 aa12.69□□□□□ -0.38
SCAF1-201ENST00000360565 RPL35AP18077 110 aaKnown RBP12.69□□□□□ -0.38
SCAF1-201ENST00000360565 MTURNQ8N3F0 131 aa12.69□□□□□ -0.38
SCAF1-201ENST00000360565 LY6G5BQ8NDX9 201 aa12.69□□□□□ -0.38
SCAF1-201ENST00000360565 TNRC6AQ8NDV7 1962 aaKnown RBP12.68□□□□□ -0.38
SCAF1-201ENST00000360565 LINC01545Q5VT33 79 aa12.68□□□□□ -0.38
SCAF1-201ENST00000360565 ADAMTSL5Q6ZMM2 481 aa12.68□□□□□ -0.38
SCAF1-201ENST00000360565 LENEPQ9Y5L5 61 aa12.68□□□□□ -0.38
SCAF1-201ENST00000360565 BRCA2P51587 3418 aa12.68□□□□□ -0.38
SCAF1-201ENST00000360565 HLA-DRB4P13762 266 aa12.68□□□□□ -0.38
SCAF1-201ENST00000360565 TIMM21Q9BVV7 248 aa12.68□□□□□ -0.38
SCAF1-201ENST00000360565 HLA-DRB4X5D2U9 266 aa12.68□□□□□ -0.38
SCAF1-201ENST00000360565 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.68□□□□□ -0.38
SCAF1-201ENST00000360565 TRAV13-1A0A0B4J241 112 aa12.68□□□□□ -0.38
SCAF1-201ENST00000360565 M0R2P5 195 aa12.68□□□□□ -0.38
SCAF1-201ENST00000360565 Q5PR19 223 aa12.68□□□□□ -0.38
SCAF1-201ENST00000360565 GDF5OSQ5U4N7 250 aa12.68□□□□□ -0.38
SCAF1-201ENST00000360565 MRPL53Q96EL3 112 aaKnown RBP12.68□□□□□ -0.38
SCAF1-201ENST00000360565 IGHV3-16A0A0C4DH30 117 aa12.67□□□□□ -0.38
SCAF1-201ENST00000360565 DEFB112Q30KQ8 113 aa12.67□□□□□ -0.38
SCAF1-201ENST00000360565 IGHV4-30-2A0A087WSY4 118 aa12.67□□□□□ -0.38
SCAF1-201ENST00000360565 C20orf78Q9BR46 151 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms