RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 NDUFA4O00483 81 aa10.61□□□□□ -0.71
SRGAP3-201ENST00000360413 PSMB8P28062 276 aa10.61□□□□□ -0.71
SRGAP3-201ENST00000360413 TM2D2Q9BX73 214 aa10.61□□□□□ -0.71
SRGAP3-201ENST00000360413 IL17DQ8TAD2 202 aa10.61□□□□□ -0.71
SRGAP3-201ENST00000360413 G3V4G9 280 aa10.61□□□□□ -0.71
SRGAP3-201ENST00000360413 ZNF503Q96F45 646 aa10.61□□□□□ -0.71
SRGAP3-201ENST00000360413 IGHV1OR15-1A0A075B7D0 117 aa10.61□□□□□ -0.71
SRGAP3-201ENST00000360413 ZNF134P52741 427 aa10.61□□□□□ -0.71
SRGAP3-201ENST00000360413 C8orf31Q8N9H6 132 aa10.61□□□□□ -0.71
SRGAP3-201ENST00000360413 MRPL36Q9P0J6 103 aaKnown RBP10.61□□□□□ -0.71
SRGAP3-201ENST00000360413 ETDCA0A1B0GVM5 59 aa10.61□□□□□ -0.71
SRGAP3-201ENST00000360413 C20orf78Q9BR46 151 aa10.61□□□□□ -0.71
SRGAP3-201ENST00000360413 A0A0G2JRQ6 117 aa10.61□□□□□ -0.71
SRGAP3-201ENST00000360413 PCP2Q8IVA1 136 aa10.61□□□□□ -0.71
SRGAP3-201ENST00000360413 NXPH4O95158 308 aa10.6□□□□□ -0.71
SRGAP3-201ENST00000360413 ZNF493Q6ZR52 646 aa10.6□□□□□ -0.71
SRGAP3-201ENST00000360413 TNRC6BQ9UPQ9 1833 aaKnown RBP10.6□□□□□ -0.71
SRGAP3-201ENST00000360413 CLPSP04118 112 aa10.6□□□□□ -0.71
SRGAP3-201ENST00000360413 ATG2AQ2TAZ0 1938 aa10.6□□□□□ -0.71
SRGAP3-201ENST00000360413 H3BUA1 57 aa10.6□□□□□ -0.71
SRGAP3-201ENST00000360413 LYPD3O95274 346 aa10.6□□□□□ -0.71
SRGAP3-201ENST00000360413 SPRR3Q9UBC9 169 aa10.6□□□□□ -0.71
SRGAP3-201ENST00000360413 TRAV12-2A0A075B6T6 113 aa10.6□□□□□ -0.71
SRGAP3-201ENST00000360413 RNASE2P10153 161 aaKnown RBP10.6□□□□□ -0.71
SRGAP3-201ENST00000360413 TEN1Q86WV5 123 aa10.6□□□□□ -0.71
SRGAP3-201ENST00000360413 KIR2DL5BQ8NHK3 375 aa10.6□□□□□ -0.71
SRGAP3-201ENST00000360413 SDHAF1A6NFY7 115 aa10.6□□□□□ -0.71
SRGAP3-201ENST00000360413 CRYGCP07315 174 aa10.6□□□□□ -0.71
SRGAP3-201ENST00000360413 SLX1AQ9BQ83 275 aa10.6□□□□□ -0.71
SRGAP3-201ENST00000360413 NTN3O00634 580 aaPredicted RBP10.6□□□□□ -0.71
SRGAP3-201ENST00000360413 V9GYY9 64 aa10.6□□□□□ -0.71
SRGAP3-201ENST00000360413 KIAA1549LQ6ZVL6 1849 aa10.59□□□□□ -0.71
SRGAP3-201ENST00000360413 DEFB131AP59861 70 aa10.59□□□□□ -0.71
SRGAP3-201ENST00000360413 ZCCHC24Q8N2G6 241 aaKnown RBP10.59□□□□□ -0.71
SRGAP3-201ENST00000360413 SPTSSBQ8NFR3 76 aa10.59□□□□□ -0.71
SRGAP3-201ENST00000360413 HS3ST6Q96QI5 342 aa10.59□□□□□ -0.71
SRGAP3-201ENST00000360413 Q6ZRM9 215 aa10.59□□□□□ -0.71
SRGAP3-201ENST00000360413 MDS2Q8NDY4 140 aa10.59□□□□□ -0.71
SRGAP3-201ENST00000360413 GATA4P43694 442 aa10.59□□□□□ -0.71
SRGAP3-201ENST00000360413 C5orf63A6NC05 138 aa10.59□□□□□ -0.71
SRGAP3-201ENST00000360413 QRFPP83859 136 aa10.59□□□□□ -0.71
SRGAP3-201ENST00000360413 C5orf24Q7Z6I8 188 aa10.59□□□□□ -0.71
SRGAP3-201ENST00000360413 FAM110DQ8TAY7 271 aaPredicted RBP10.59□□□□□ -0.71
SRGAP3-201ENST00000360413 PDE6GP18545 87 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 PYGO2Q9BRQ0 406 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 ZFYVE26Q68DK2 2539 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 LINC00205P59089 165 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 CR1LQ2VPA4 569 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 UNQ6494/PRO21346Q6UXR6 183 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 H0YGX0 51 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 WFDC2Q14508 124 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 MLANAQ16655 118 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 MYO9AB2RTY4 2548 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 IGFBPL1Q8WX77 278 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 WDR90Q96KV7 1748 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 IGLL5B9A064 214 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 IGLC1P0CG04 106 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 U3KQE9 123 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 CRYGSP22914 178 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 SLC25A29Q8N8R3 303 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 CCL18P55774 89 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 FAM231DQ6ZW35 169 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 MUSTN1Q8IVN3 82 aa10.58□□□□□ -0.72
SRGAP3-201ENST00000360413 PROP1O75360 226 aa10.57□□□□□ -0.72
SRGAP3-201ENST00000360413 NOTCH2Q04721 2471 aa10.57□□□□□ -0.72
SRGAP3-201ENST00000360413 THSD7AQ9UPZ6 1657 aa10.57□□□□□ -0.72
SRGAP3-201ENST00000360413 IGHV3-16A0A0C4DH30 117 aa10.57□□□□□ -0.72
SRGAP3-201ENST00000360413 FOXI1Q12951 378 aa10.57□□□□□ -0.72
SRGAP3-201ENST00000360413 LENEPQ9Y5L5 61 aa10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 NUP210LQ5VU65 1888 aa10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 A0A0U1RQV1 116 aa10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 MBD3L4A6NDZ8 208 aaPredicted RBP10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 MBD3L3A6NE82 208 aaPredicted RBP10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 MBD3L5A6NJ08 208 aaPredicted RBP10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 BUB3O43684 328 aa10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 TIRAPP58753 221 aa10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 ZFP36L1Q07352 338 aaKnown RBP10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 LY6DQ14210 128 aa10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 MBD3L2Q8NHZ7 208 aaPredicted RBP10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 TMEM14CQ9P0S9 112 aa10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 DAZ2Q13117 558 aaKnown RBP10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 DAZ4Q86SG3 579 aaKnown RBP10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 C14orf132Q9NPU4 83 aa10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 DAZ3Q9NR90 486 aaKnown RBP10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 ZNF726P1Q15940 193 aa10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 ASPHD1Q5U4P2 390 aa10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 PAX9P55771 341 aa10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 LYNX1G3V0Z9 82 aa10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 LYNX1P0DP58 116 aa10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 CD177Q8N6Q3 437 aa10.56□□□□□ -0.72
SRGAP3-201ENST00000360413 GPR179Q6PRD1 2367 aa10.55□□□□□ -0.72
SRGAP3-201ENST00000360413 C14orf177Q52M58 125 aa10.55□□□□□ -0.72
SRGAP3-201ENST00000360413 XCL2Q9UBD3 114 aa10.55□□□□□ -0.72
SRGAP3-201ENST00000360413 OVOL3O00110 214 aa10.55□□□□□ -0.72
SRGAP3-201ENST00000360413 DEFB105AQ8NG35 78 aa10.55□□□□□ -0.72
SRGAP3-201ENST00000360413 TMEM14BQ9NUH8 114 aa10.55□□□□□ -0.72
SRGAP3-201ENST00000360413 IGKV2D-24A0A075B6R9 120 aa10.55□□□□□ -0.72
SRGAP3-201ENST00000360413 ICOSQ9Y6W8 199 aa10.55□□□□□ -0.72
SRGAP3-201ENST00000360413 EFNA2O43921 213 aa10.55□□□□□ -0.72
SRGAP3-201ENST00000360413 TANC1Q9C0D5 1861 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms