RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 LYPD2Q6UXB3 125 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 CFHR4Q92496 578 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 C5orf63A6NC05 138 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 DAZ2Q13117 558 aaKnown RBP7.75□□□□□ -1.17
CUX1-203ENST00000360264 C2orf66Q6UXQ4 117 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 DAZ4Q86SG3 579 aaKnown RBP7.75□□□□□ -1.17
CUX1-203ENST00000360264 DAZ3Q9NR90 486 aaKnown RBP7.75□□□□□ -1.17
CUX1-203ENST00000360264 NDUFA4L2Q9NRX3 87 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 ORMDL1Q9P0S3 153 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 ADAMTSL5Q6ZMM2 481 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 C1orf122Q6ZSJ8 110 aa7.75□□□□□ -1.17
CUX1-203ENST00000360264 C9orf118A6NHY6 69 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 A8MWP6 167 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 CR1LQ2VPA4 569 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 MRPL36Q9P0J6 103 aaKnown RBP7.74□□□□□ -1.17
CUX1-203ENST00000360264 HECTD1Q9ULT8 2610 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 TRACP01848 142 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 TFF1P04155 84 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 KAAG1Q9UBP8 84 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 CEND1Q8N111 149 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 TRAV25A0A0B4J276 109 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 IFITM1P13164 125 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 IGF2BP2-AS1Q96M15 143 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 HS3ST6Q96QI5 342 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 ETDCA0A1B0GVM5 59 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 DLEU1O43261 78 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 MP68P56378 58 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 IL15RAQ13261 267 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 IGFL4Q6B9Z1 124 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 TNRC6BQ9UPQ9 1833 aaKnown RBP7.74□□□□□ -1.17
CUX1-203ENST00000360264 C3orf79P0CE67 100 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 CHKB-CPT1BH3BT56 60 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 UBE2BP63146 152 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 Q6ZWC4 215 aa7.74□□□□□ -1.17
CUX1-203ENST00000360264 NDUFS5O43920 106 aa7.73□□□□□ -1.17
CUX1-203ENST00000360264 NXPH4O95158 308 aa7.73□□□□□ -1.17
CUX1-203ENST00000360264 IGKV1-16P04430 117 aa7.73□□□□□ -1.17
CUX1-203ENST00000360264 GAGE6Q13070 117 aa7.73□□□□□ -1.17
CUX1-203ENST00000360264 KLF2Q9Y5W3 355 aaPredicted RBP7.73□□□□□ -1.17
CUX1-203ENST00000360264 CRIPAKQ8N1N5 446 aa7.73□□□□□ -1.17
CUX1-203ENST00000360264 NOP10Q9NPE3 64 aaKnown RBP7.73□□□□□ -1.17
CUX1-203ENST00000360264 CYTL1Q9NRR1 136 aa7.73□□□□□ -1.17
CUX1-203ENST00000360264 IGHV3-16A0A0C4DH30 117 aa7.73□□□□□ -1.17
CUX1-203ENST00000360264 C9JQL5 133 aa7.73□□□□□ -1.17
CUX1-203ENST00000360264 CCL18P55774 89 aa7.73□□□□□ -1.17
CUX1-203ENST00000360264 IGKV2D-24A0A075B6R9 120 aa7.72□□□□□ -1.17
CUX1-203ENST00000360264 FOXE3Q13461 319 aa7.72□□□□□ -1.17
CUX1-203ENST00000360264 ETV2O00321 342 aaPredicted RBP7.72□□□□□ -1.17
CUX1-203ENST00000360264 ZNF493Q6ZR52 646 aa7.72□□□□□ -1.17
CUX1-203ENST00000360264 IL17DQ8TAD2 202 aa7.72□□□□□ -1.17
CUX1-203ENST00000360264 PRO1854Q9UHT4 67 aa7.72□□□□□ -1.17
CUX1-203ENST00000360264 KLK9Q9UKQ9 250 aa7.72□□□□□ -1.17
CUX1-203ENST00000360264 H0YGX0 51 aa7.72□□□□□ -1.17
CUX1-203ENST00000360264 SELENOKQ9Y6D0 94 aa7.72□□□□□ -1.17
CUX1-203ENST00000360264 IGHV7-4-1A0A0J9YVY3 117 aa7.72□□□□□ -1.17
CUX1-203ENST00000360264 C18orf32Q8TCD1 76 aa7.72□□□□□ -1.17
CUX1-203ENST00000360264 C1orf43Q9BWL3 253 aa7.72□□□□□ -1.17
CUX1-203ENST00000360264 C9orf153Q5TBE3 101 aa7.72□□□□□ -1.17
CUX1-203ENST00000360264 C20orf144Q9BQM9 153 aa7.72□□□□□ -1.17
CUX1-203ENST00000360264 J3QQQ9 107 aa7.72□□□□□ -1.17
CUX1-203ENST00000360264 MRPL23Q16540 153 aaKnown RBP7.72□□□□□ -1.17
CUX1-203ENST00000360264 SIVA1O15304 175 aa7.72□□□□□ -1.17
CUX1-203ENST00000360264 TCF15Q12870 199 aa7.72□□□□□ -1.17
CUX1-203ENST00000360264 ZNRF2Q8NHG8 242 aa7.72□□□□□ -1.17
CUX1-203ENST00000360264 SMKR1H3BMG3 65 aa7.72□□□□□ -1.17
CUX1-203ENST00000360264 KNCNA6PVL3 124 aa7.71□□□□□ -1.17
CUX1-203ENST00000360264 Q6ZVH6 145 aa7.71□□□□□ -1.17
CUX1-203ENST00000360264 TRAV12-2A0A075B6T6 113 aa7.71□□□□□ -1.17
CUX1-203ENST00000360264 K7EP34 96 aa7.71□□□□□ -1.17
CUX1-203ENST00000360264 PRSS57Q6UWY2 283 aa7.71□□□□□ -1.17
CUX1-203ENST00000360264 MORN5Q5VZ52 161 aa7.71□□□□□ -1.17
CUX1-203ENST00000360264 NDUFB1O75438 58 aa7.71□□□□□ -1.18
CUX1-203ENST00000360264 MRAPQ8TCY5 172 aa7.71□□□□□ -1.18
CUX1-203ENST00000360264 IGLV1-44P01699 117 aa7.71□□□□□ -1.18
CUX1-203ENST00000360264 SLC25A29Q8N8R3 303 aa7.71□□□□□ -1.18
CUX1-203ENST00000360264 BUB3O43684 328 aa7.7□□□□□ -1.18
CUX1-203ENST00000360264 QRFPP83859 136 aa7.7□□□□□ -1.18
CUX1-203ENST00000360264 RSPO3Q9BXY4 272 aaPredicted RBP7.7□□□□□ -1.18
CUX1-203ENST00000360264 A0A087WV48 116 aa7.7□□□□□ -1.18
CUX1-203ENST00000360264 SHISA9B4DS77 424 aa7.7□□□□□ -1.18
CUX1-203ENST00000360264 FGF6P10767 208 aa7.7□□□□□ -1.18
CUX1-203ENST00000360264 G3V318 75 aa7.7□□□□□ -1.18
CUX1-203ENST00000360264 CFHR3Q02985 330 aa7.7□□□□□ -1.18
CUX1-203ENST00000360264 LGALS9BQ3B8N2 356 aa7.7□□□□□ -1.18
CUX1-203ENST00000360264 C14orf177Q52M58 125 aa7.7□□□□□ -1.18
CUX1-203ENST00000360264 LGALS9CQ6DKI2 356 aa7.7□□□□□ -1.18
CUX1-203ENST00000360264 COX8AP10176 69 aa7.7□□□□□ -1.18
CUX1-203ENST00000360264 ICOSQ9Y6W8 199 aa7.7□□□□□ -1.18
CUX1-203ENST00000360264 KLK5Q9Y337 293 aaPredicted RBP7.7□□□□□ -1.18
CUX1-203ENST00000360264 SIGLEC8Q9NYZ4 499 aa7.7□□□□□ -1.18
CUX1-203ENST00000360264 IGKV1OR2-108A0A075B7D4 117 aa7.69□□□□□ -1.18
CUX1-203ENST00000360264 NBL1P41271 181 aa7.69□□□□□ -1.18
CUX1-203ENST00000360264 C4orf48Q5BLP8 95 aa7.69□□□□□ -1.18
CUX1-203ENST00000360264 CENPEQ02224 2701 aa7.69□□□□□ -1.18
CUX1-203ENST00000360264 CCL24O00175 119 aa7.69□□□□□ -1.18
CUX1-203ENST00000360264 TM2D2Q9BX73 214 aa7.69□□□□□ -1.18
CUX1-203ENST00000360264 MPV17L2Q567V2 206 aa7.69□□□□□ -1.18
CUX1-203ENST00000360264 K7EM74 188 aa7.69□□□□□ -1.18
CUX1-203ENST00000360264 LY6HO94772 140 aa7.69□□□□□ -1.18
CUX1-203ENST00000360264 TIRAPP58753 221 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms