RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 ZFAND2AQ8N6M9 145 aa11.27□□□□□ -0.61
GABPB1-202ENST00000359031 RNF152Q8N8N0 203 aa11.27□□□□□ -0.61
GABPB1-202ENST00000359031 OR8A1Q8NGG7 326 aa11.27□□□□□ -0.61
GABPB1-202ENST00000359031 FAM19A4Q96LR4 140 aa11.27□□□□□ -0.61
GABPB1-202ENST00000359031 LAMTOR2Q9Y2Q5 125 aa11.27□□□□□ -0.61
GABPB1-202ENST00000359031 TRAV21A0A0B4J279 112 aa11.26□□□□□ -0.61
GABPB1-202ENST00000359031 SNAI2O43623 268 aa11.26□□□□□ -0.61
GABPB1-202ENST00000359031 CKS2P33552 79 aa11.26□□□□□ -0.61
GABPB1-202ENST00000359031 CACNG7P62955 275 aa11.26□□□□□ -0.61
GABPB1-202ENST00000359031 SPATA45Q537H7 98 aa11.26□□□□□ -0.61
GABPB1-202ENST00000359031 PRR9Q5T870 116 aa11.26□□□□□ -0.61
GABPB1-202ENST00000359031 APRG1Q8IVJ8 170 aa11.26□□□□□ -0.61
GABPB1-202ENST00000359031 SPATA3Q8NHX4 192 aa11.26□□□□□ -0.61
GABPB1-202ENST00000359031 SVEP1Q4LDE5 3571 aa11.26□□□□□ -0.61
GABPB1-202ENST00000359031 SYS1-DBNDD2H3BUS1 97 aa11.25□□□□□ -0.61
GABPB1-202ENST00000359031 Q8N2B8 174 aa11.25□□□□□ -0.61
GABPB1-202ENST00000359031 OR10AG1Q8NH19 301 aa11.25□□□□□ -0.61
GABPB1-202ENST00000359031 RNF185Q96GF1 192 aa11.25□□□□□ -0.61
GABPB1-202ENST00000359031 UBE2E2Q96LR5 201 aa11.25□□□□□ -0.61
GABPB1-202ENST00000359031 SIGLEC8Q9NYZ4 499 aa11.25□□□□□ -0.61
GABPB1-202ENST00000359031 IGHV4-4A0A075B6R2 117 aa11.24□□□□□ -0.61
GABPB1-202ENST00000359031 LGALS9O00182 355 aa11.24□□□□□ -0.61
GABPB1-202ENST00000359031 KLHDC1Q8N7A1 406 aa11.24□□□□□ -0.61
GABPB1-202ENST00000359031 MAP1LC3CQ9BXW4 147 aa11.24□□□□□ -0.61
GABPB1-202ENST00000359031 TRAV9-2A0A087WT02 112 aa11.24□□□□□ -0.61
GABPB1-202ENST00000359031 IFI27P40305 119 aaPredicted RBP11.24□□□□□ -0.61
GABPB1-202ENST00000359031 PET117Q6UWS5 81 aa11.24□□□□□ -0.61
GABPB1-202ENST00000359031 SMIM15Q7Z3B0 74 aa11.24□□□□□ -0.61
GABPB1-202ENST00000359031 DCANP1Q8TF63 244 aa11.24□□□□□ -0.61
GABPB1-202ENST00000359031 C2orf88Q9BSF0 95 aa11.24□□□□□ -0.61
GABPB1-202ENST00000359031 MSRB1Q9NZV6 116 aa11.24□□□□□ -0.61
GABPB1-202ENST00000359031 IGKV3-7A0A075B6H7 116 aa11.23□□□□□ -0.61
GABPB1-202ENST00000359031 NPYP01303 97 aa11.23□□□□□ -0.61
GABPB1-202ENST00000359031 MED14OSP0DP75 135 aa11.23□□□□□ -0.61
GABPB1-202ENST00000359031 EDN2P20800 178 aa11.23□□□□□ -0.61
GABPB1-202ENST00000359031 LINC00173Q6ZV60 143 aa11.23□□□□□ -0.61
GABPB1-202ENST00000359031 TMEM86BQ8N661 226 aa11.23□□□□□ -0.61
GABPB1-202ENST00000359031 MAP1LC3AQ9H492 121 aa11.23□□□□□ -0.61
GABPB1-202ENST00000359031 NSD1Q96L73 2696 aaPredicted RBP11.22□□□□□ -0.61
GABPB1-202ENST00000359031 INAFM1C9JVW0 142 aa11.22□□□□□ -0.61
GABPB1-202ENST00000359031 TCF21O43680 179 aa11.22□□□□□ -0.61
GABPB1-202ENST00000359031 ZNF705AQ6ZN79 300 aaPredicted RBP11.22□□□□□ -0.61
GABPB1-202ENST00000359031 SPATA12Q7Z6I5 190 aa11.22□□□□□ -0.61
GABPB1-202ENST00000359031 UQCR10Q9UDW1 63 aa11.22□□□□□ -0.61
GABPB1-202ENST00000359031 IGHV4OR15-8A0A075B7B6 117 aa11.21□□□□□ -0.61
GABPB1-202ENST00000359031 A0A087WW49 117 aa11.21□□□□□ -0.61
GABPB1-202ENST00000359031 LOC389332A0A1B0GUA5 103 aa11.21□□□□□ -0.61
GABPB1-202ENST00000359031 SMKR1H3BMG3 65 aa11.21□□□□□ -0.61
GABPB1-202ENST00000359031 NCR2O95944 276 aa11.21□□□□□ -0.61
GABPB1-202ENST00000359031 ATOH7Q8N100 152 aa11.21□□□□□ -0.61
GABPB1-202ENST00000359031 OR4C46A6NHA9 309 aa11.2□□□□□ -0.62
GABPB1-202ENST00000359031 F6UB75 175 aa11.2□□□□□ -0.62
GABPB1-202ENST00000359031 H3BVH4 76 aa11.2□□□□□ -0.62
GABPB1-202ENST00000359031 M0R143 59 aa11.2□□□□□ -0.62
GABPB1-202ENST00000359031 FN1P02751 2386 aaKnown RBP11.2□□□□□ -0.62
GABPB1-202ENST00000359031 IGLC3P0DOY3 106 aa11.2□□□□□ -0.62
GABPB1-202ENST00000359031 DEFB1P60022 68 aa11.2□□□□□ -0.62
GABPB1-202ENST00000359031 SPANXN1Q5VSR9 72 aa11.2□□□□□ -0.62
GABPB1-202ENST00000359031 ODF3Q96PU9 254 aa11.2□□□□□ -0.62
GABPB1-202ENST00000359031 ZNF747Q9BV97 191 aa11.2□□□□□ -0.62
GABPB1-202ENST00000359031 MS4A6AQ9H2W1 248 aa11.2□□□□□ -0.62
GABPB1-202ENST00000359031 LINC01546A6NGU7 62 aa11.2□□□□□ -0.62
GABPB1-202ENST00000359031 EREGO14944 169 aa11.2□□□□□ -0.62
GABPB1-202ENST00000359031 HBDP02042 147 aa11.2□□□□□ -0.62
GABPB1-202ENST00000359031 SRD5A1P18405 259 aa11.2□□□□□ -0.62
GABPB1-202ENST00000359031 HOXD3P31249 432 aaPredicted RBP11.2□□□□□ -0.62
GABPB1-202ENST00000359031 ASIPP42127 132 aa11.2□□□□□ -0.62
GABPB1-202ENST00000359031 SYNJ2BPP57105 145 aa11.2□□□□□ -0.62
GABPB1-202ENST00000359031 Q6ZQT7 251 aa11.2□□□□□ -0.62
GABPB1-202ENST00000359031 CSPG4Q6UVK1 2322 aa11.19□□□□□ -0.62
GABPB1-202ENST00000359031 A0A096LNJ9 63 aa11.19□□□□□ -0.62
GABPB1-202ENST00000359031 KLLNB2CW77 178 aa11.19□□□□□ -0.62
GABPB1-202ENST00000359031 J3KRW8 73 aa11.19□□□□□ -0.62
GABPB1-202ENST00000359031 K7EQG2 157 aa11.19□□□□□ -0.62
GABPB1-202ENST00000359031 SNRPD3P62318 126 aaKnown RBP11.19□□□□□ -0.62
GABPB1-202ENST00000359031 LINC01545Q5VT33 79 aa11.19□□□□□ -0.62
GABPB1-202ENST00000359031 SNHG12Q9BXW3 62 aa11.19□□□□□ -0.62
GABPB1-202ENST00000359031 NXT2Q9NPJ8 142 aaKnown RBP11.19□□□□□ -0.62
GABPB1-202ENST00000359031 JMJD1CQ15652 2540 aa11.19□□□□□ -0.62
GABPB1-202ENST00000359031 TNFRSF6BO95407 300 aa11.18□□□□□ -0.62
GABPB1-202ENST00000359031 RNASE4P34096 147 aaKnown RBP11.18□□□□□ -0.62
GABPB1-202ENST00000359031 ANXA2RQ3ZCQ2 193 aa11.18□□□□□ -0.62
GABPB1-202ENST00000359031 EVI2AP22794 236 aa11.17□□□□□ -0.62
GABPB1-202ENST00000359031 S100A4P26447 101 aaKnown RBP11.17□□□□□ -0.62
GABPB1-202ENST00000359031 LEPP41159 167 aa11.17□□□□□ -0.62
GABPB1-202ENST00000359031 WFDC3Q8IUB2 231 aa11.17□□□□□ -0.62
GABPB1-202ENST00000359031 MRAP2Q96G30 205 aa11.17□□□□□ -0.62
GABPB1-202ENST00000359031 ST20Q9HBF5 79 aa11.17□□□□□ -0.62
GABPB1-202ENST00000359031 MAJINQ3KP22 176 aa11.17□□□□□ -0.62
GABPB1-202ENST00000359031 DEFB125Q8N687 156 aa11.17□□□□□ -0.62
GABPB1-202ENST00000359031 SCRT2Q9NQ03 307 aa11.17□□□□□ -0.62
GABPB1-202ENST00000359031 TIMM8BQ9Y5J9 83 aaPredicted RBP11.17□□□□□ -0.62
GABPB1-202ENST00000359031 SELENOKQ9Y6D0 94 aa11.17□□□□□ -0.62
GABPB1-202ENST00000359031 PRSS47A8MTI9 375 aa11.16□□□□□ -0.62
GABPB1-202ENST00000359031 ZNF688P0C7X2 276 aa11.16□□□□□ -0.62
GABPB1-202ENST00000359031 IGLL1P15814 213 aa11.16□□□□□ -0.62
GABPB1-202ENST00000359031 PSMG4Q5JS54 123 aa11.16□□□□□ -0.62
GABPB1-202ENST00000359031 OR2K2Q8NGT1 345 aa11.16□□□□□ -0.62
GABPB1-202ENST00000359031 A0A0J9YX75 114 aa11.15□□□□□ -0.62
GABPB1-202ENST00000359031 HSBP1L1C9JCN9 74 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms