RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 HOXA3O43365 443 aaPredicted RBP9.74□□□□□ -0.85
GGPS1-202ENST00000358966 HLA-DMBP28068 263 aa9.74□□□□□ -0.85
GGPS1-202ENST00000358966 ETDBQ3ZM63 59 aa9.74□□□□□ -0.85
GGPS1-202ENST00000358966 WNK1Q9H4A3 2382 aa9.74□□□□□ -0.85
GGPS1-202ENST00000358966 MRPS12O15235 138 aaKnown RBP9.74□□□□□ -0.85
GGPS1-202ENST00000358966 CRXO43186 299 aaPredicted RBP9.74□□□□□ -0.85
GGPS1-202ENST00000358966 HLA-DQA1P01909 254 aa9.74□□□□□ -0.85
GGPS1-202ENST00000358966 MT-ATP8P03928 68 aa9.74□□□□□ -0.85
GGPS1-202ENST00000358966 PPIFP30405 207 aaKnown RBP9.74□□□□□ -0.85
GGPS1-202ENST00000358966 LRRC75A-AS1Q8N1F1 130 aa9.74□□□□□ -0.85
GGPS1-202ENST00000358966 C1QTNF4Q9BXJ3 329 aa9.74□□□□□ -0.85
GGPS1-202ENST00000358966 TMEM191AQ9H0A3 160 aa9.74□□□□□ -0.85
GGPS1-202ENST00000358966 EPDR1Q9UM22 224 aa9.74□□□□□ -0.85
GGPS1-202ENST00000358966 V9GYV3 84 aa9.74□□□□□ -0.85
GGPS1-202ENST00000358966 SORL1Q92673 2214 aa9.73□□□□□ -0.85
GGPS1-202ENST00000358966 SAMD5Q5TGI4 173 aa9.73□□□□□ -0.85
GGPS1-202ENST00000358966 C20orf78Q9BR46 151 aa9.73□□□□□ -0.85
GGPS1-202ENST00000358966 ZFAND3Q9H8U3 227 aa9.73□□□□□ -0.85
GGPS1-202ENST00000358966 COX8AP10176 69 aa9.73□□□□□ -0.85
GGPS1-202ENST00000358966 UNQ9165/PRO28630Q6UXU0 137 aa9.73□□□□□ -0.85
GGPS1-202ENST00000358966 GOLT1AQ6ZVE7 132 aa9.73□□□□□ -0.85
GGPS1-202ENST00000358966 TRBV19A0A075B6N1 114 aa9.72□□□□□ -0.85
GGPS1-202ENST00000358966 CLPSL1A2RUU4 121 aa9.72□□□□□ -0.85
GGPS1-202ENST00000358966 C9JCJ5 164 aa9.72□□□□□ -0.85
GGPS1-202ENST00000358966 IGF1P05019 195 aa9.72□□□□□ -0.85
GGPS1-202ENST00000358966 EEF1AKMT3Q96AZ1 226 aa9.72□□□□□ -0.85
GGPS1-202ENST00000358966 CYSLTR1Q9Y271 337 aa9.72□□□□□ -0.85
GGPS1-202ENST00000358966 J3QLI3 93 aa9.72□□□□□ -0.85
GGPS1-202ENST00000358966 M0QXV9 152 aa9.72□□□□□ -0.85
GGPS1-202ENST00000358966 EDN2P20800 178 aa9.72□□□□□ -0.85
GGPS1-202ENST00000358966 SIGLEC15Q6ZMC9 328 aa9.72□□□□□ -0.85
GGPS1-202ENST00000358966 VGLL1Q99990 258 aa9.72□□□□□ -0.85
GGPS1-202ENST00000358966 PMCHL2Q9BQD1 86 aa9.72□□□□□ -0.85
GGPS1-202ENST00000358966 MS4A6AQ9H2W1 248 aa9.72□□□□□ -0.85
GGPS1-202ENST00000358966 RABAC1Q9UI14 185 aa9.72□□□□□ -0.85
GGPS1-202ENST00000358966 SMAD5-AS1Q9Y6J3 95 aa9.72□□□□□ -0.85
GGPS1-202ENST00000358966 SETXQ7Z333 2677 aaKnown RBP9.71□□□□□ -0.85
GGPS1-202ENST00000358966 FSHBP01225 129 aa9.71□□□□□ -0.85
GGPS1-202ENST00000358966 TCRAP04437 139 aa9.71□□□□□ -0.85
GGPS1-202ENST00000358966 LINC00322Q6ZN03 302 aaPredicted RBP9.71□□□□□ -0.85
GGPS1-202ENST00000358966 GRAMD2BQ96HH9 432 aa9.71□□□□□ -0.85
GGPS1-202ENST00000358966 RAX2Q96IS3 184 aa9.71□□□□□ -0.85
GGPS1-202ENST00000358966 HIVEP2P31629 2446 aa9.7□□□□□ -0.86
GGPS1-202ENST00000358966 ANXA2RQ3ZCQ2 193 aa9.7□□□□□ -0.86
GGPS1-202ENST00000358966 TMEM14CQ9P0S9 112 aa9.7□□□□□ -0.86
GGPS1-202ENST00000358966 RNF182Q8N6D2 247 aa9.7□□□□□ -0.86
GGPS1-202ENST00000358966 PRNTQ86SH4 94 aa9.69□□□□□ -0.86
GGPS1-202ENST00000358966 SMR3AQ99954 134 aa9.69□□□□□ -0.86
GGPS1-202ENST00000358966 CDIP1Q9H305 208 aa9.69□□□□□ -0.86
GGPS1-202ENST00000358966 IBA57Q5T440 356 aaKnown RBP9.69□□□□□ -0.86
GGPS1-202ENST00000358966 VPREB3Q9UKI3 123 aa9.69□□□□□ -0.86
GGPS1-202ENST00000358966 IGKV3-7A0A075B6H7 116 aa9.69□□□□□ -0.86
GGPS1-202ENST00000358966 IGKV2-40A0A087WW87 121 aaPredicted RBP9.69□□□□□ -0.86
GGPS1-202ENST00000358966 TRBV7-1A0A0A6YYK4 115 aa9.69□□□□□ -0.86
GGPS1-202ENST00000358966 A4D1N5 150 aa9.69□□□□□ -0.86
GGPS1-202ENST00000358966 F8W1H4 67 aa9.69□□□□□ -0.86
GGPS1-202ENST00000358966 IGKV2D-40P01614 121 aaPredicted RBP9.69□□□□□ -0.86
GGPS1-202ENST00000358966 IGLV2-11P01706 119 aa9.69□□□□□ -0.86
GGPS1-202ENST00000358966 CRIP2P52943 208 aaPredicted RBP9.69□□□□□ -0.86
GGPS1-202ENST00000358966 Q6YL49 198 aa9.69□□□□□ -0.86
GGPS1-202ENST00000358966 SYT8Q8NBV8 401 aa9.69□□□□□ -0.86
GGPS1-202ENST00000358966 C18orf15Q96N68 181 aa9.69□□□□□ -0.86
GGPS1-202ENST00000358966 TM2D2Q9BX73 214 aa9.69□□□□□ -0.86
GGPS1-202ENST00000358966 PPDPFQ9H3Y8 114 aa9.69□□□□□ -0.86
GGPS1-202ENST00000358966 OTORQ9NRC9 128 aa9.69□□□□□ -0.86
GGPS1-202ENST00000358966 HIVEP1P15822 2718 aa9.68□□□□□ -0.86
GGPS1-202ENST00000358966 BUB3O43684 328 aa9.68□□□□□ -0.86
GGPS1-202ENST00000358966 LEPROTL1O95214 131 aa9.68□□□□□ -0.86
GGPS1-202ENST00000358966 OR4X2Q8NGF9 303 aa9.68□□□□□ -0.86
GGPS1-202ENST00000358966 URB1-AS1Q96HZ7 61 aa9.68□□□□□ -0.86
GGPS1-202ENST00000358966 SCGB2A1O75556 95 aa9.68□□□□□ -0.86
GGPS1-202ENST00000358966 XGP55808 180 aa9.68□□□□□ -0.86
GGPS1-202ENST00000358966 Q8TAT8 98 aa9.68□□□□□ -0.86
GGPS1-202ENST00000358966 CFHR3Q02985 330 aa9.67□□□□□ -0.86
GGPS1-202ENST00000358966 KLK9Q2XQG4 91 aa9.67□□□□□ -0.86
GGPS1-202ENST00000358966 Q6ZUT4 128 aa9.67□□□□□ -0.86
GGPS1-202ENST00000358966 ZNF331Q9NQX6 463 aaPredicted RBP9.67□□□□□ -0.86
GGPS1-202ENST00000358966 KLK9Q9UKQ9 250 aa9.67□□□□□ -0.86
GGPS1-202ENST00000358966 FAM223BA6NKX1 122 aa9.67□□□□□ -0.86
GGPS1-202ENST00000358966 IGLV1-40P01703 118 aa9.67□□□□□ -0.86
GGPS1-202ENST00000358966 FAM223AQ8IWN6 122 aa9.67□□□□□ -0.86
GGPS1-202ENST00000358966 FN1P02751 2386 aaKnown RBP9.66□□□□□ -0.86
GGPS1-202ENST00000358966 IGHV1-24A0A0C4DH33 117 aa9.66□□□□□ -0.86
GGPS1-202ENST00000358966 IGHG4P01861 327 aa9.66□□□□□ -0.86
GGPS1-202ENST00000358966 FGF6P10767 208 aa9.66□□□□□ -0.86
GGPS1-202ENST00000358966 DEFB1P60022 68 aa9.66□□□□□ -0.86
GGPS1-202ENST00000358966 KRTAP1-1Q07627 177 aa9.66□□□□□ -0.86
GGPS1-202ENST00000358966 KLF5Q13887 457 aaPredicted RBP9.66□□□□□ -0.86
GGPS1-202ENST00000358966 Q86TA4 180 aa9.66□□□□□ -0.86
GGPS1-202ENST00000358966 NHLRC4P0CG21 123 aaPredicted RBP9.66□□□□□ -0.86
GGPS1-202ENST00000358966 RPL7P18124 248 aaKnown RBP9.66□□□□□ -0.86
GGPS1-202ENST00000358966 TM4SF20Q53R12 229 aa9.66□□□□□ -0.86
GGPS1-202ENST00000358966 C8orf49Q96NF6 230 aa9.66□□□□□ -0.86
GGPS1-202ENST00000358966 ZNF702PQ9H963 129 aa9.66□□□□□ -0.86
GGPS1-202ENST00000358966 KLF12Q9Y4X4 402 aa9.66□□□□□ -0.86
GGPS1-202ENST00000358966 A0A087WX48 190 aa9.65□□□□□ -0.86
GGPS1-202ENST00000358966 ZNF785A8K8V0 405 aa9.65□□□□□ -0.86
GGPS1-202ENST00000358966 PRAC2D3DTV9 90 aa9.65□□□□□ -0.86
GGPS1-202ENST00000358966 C18orf65Q6ZTR6 163 aa9.65□□□□□ -0.86
GGPS1-202ENST00000358966 LY96Q9Y6Y9 160 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms