RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 TCF15Q12870 199 aa5.19□□□□□ -1.58
TRIM38-201ENST00000357085 FAM201AQ5SY85 155 aa5.19□□□□□ -1.58
TRIM38-201ENST00000357085 NTN5Q8WTR8 489 aaPredicted RBP5.19□□□□□ -1.58
TRIM38-201ENST00000357085 FAM236AA0A1B0GUQ0 79 aa5.19□□□□□ -1.58
TRIM38-201ENST00000357085 FAM236BA0A1B0GV22 79 aa5.19□□□□□ -1.58
TRIM38-201ENST00000357085 SHISA2Q6UWI4 295 aa5.19□□□□□ -1.58
TRIM38-201ENST00000357085 TRIP6Q15654 476 aaKnown RBP5.18□□□□□ -1.58
TRIM38-201ENST00000357085 C17orf58Q2M2W7 97 aa5.18□□□□□ -1.58
TRIM38-201ENST00000357085 ACACBO00763 2458 aa5.18□□□□□ -1.58
TRIM38-201ENST00000357085 IGHV4-4A0A075B6R2 117 aa5.18□□□□□ -1.58
TRIM38-201ENST00000357085 LINC01565O15544 149 aa5.18□□□□□ -1.58
TRIM38-201ENST00000357085 FOXC1Q12948 553 aa5.18□□□□□ -1.58
TRIM38-201ENST00000357085 ZNF503Q96F45 646 aa5.18□□□□□ -1.58
TRIM38-201ENST00000357085 FAM216BQ8N7L0 139 aa5.18□□□□□ -1.58
TRIM38-201ENST00000357085 C10orf142B7Z368 130 aa5.18□□□□□ -1.58
TRIM38-201ENST00000357085 COX7A1P24310 79 aa5.18□□□□□ -1.58
TRIM38-201ENST00000357085 ECSCRQ19T08 205 aa5.18□□□□□ -1.58
TRIM38-201ENST00000357085 TMEM86BQ8N661 226 aa5.18□□□□□ -1.58
TRIM38-201ENST00000357085 C8orf49Q96NF6 230 aa5.18□□□□□ -1.58
TRIM38-201ENST00000357085 H0YGX0 51 aa5.18□□□□□ -1.58
TRIM38-201ENST00000357085 TCL1BO95988 128 aa5.18□□□□□ -1.58
TRIM38-201ENST00000357085 CD28P10747 220 aa5.18□□□□□ -1.58
TRIM38-201ENST00000357085 MBD3L4A6NDZ8 208 aaPredicted RBP5.18□□□□□ -1.58
TRIM38-201ENST00000357085 MBD3L3A6NE82 208 aaPredicted RBP5.18□□□□□ -1.58
TRIM38-201ENST00000357085 MBD3L5A6NJ08 208 aaPredicted RBP5.18□□□□□ -1.58
TRIM38-201ENST00000357085 LINC01620Q4KN68 170 aa5.18□□□□□ -1.58
TRIM38-201ENST00000357085 FAM222AQ5U5X8 452 aa5.18□□□□□ -1.58
TRIM38-201ENST00000357085 MBD3L2Q8NHZ7 208 aaPredicted RBP5.18□□□□□ -1.58
TRIM38-201ENST00000357085 FAM110DQ8TAY7 271 aaPredicted RBP5.18□□□□□ -1.58
TRIM38-201ENST00000357085 NDUFC2O95298 119 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 PCSK5Q92824 1860 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 C7orf69Q9H7B7 122 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 NPFFO15130 113 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 IGLC6P0CF74 106 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 ICOSQ9Y6W8 199 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 hADV29S1A0JD25 119 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 BUB1B-PAK6H3BSN5 160 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 UBE2D3P61077 147 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 UBE2D2P62837 147 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 C3orf22Q8N5N4 141 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 PEMTQ9UBM1 199 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 KLK10O43240 276 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 NPC2P61916 151 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 C2CD3Q4AC94 2353 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 IGKV2-40A0A087WW87 121 aaPredicted RBP5.17□□□□□ -1.58
TRIM38-201ENST00000357085 IGKV2D-40P01614 121 aaPredicted RBP5.17□□□□□ -1.58
TRIM38-201ENST00000357085 INSL3P51460 131 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 IGHV1-18A0A0C4DH31 117 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 HOXB4P17483 251 aaPredicted RBP5.17□□□□□ -1.58
TRIM38-201ENST00000357085 SLC25A29Q8N8R3 303 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 TTTY13Q9BZ97 58 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 PROK2Q9HC23 129 aa5.17□□□□□ -1.58
TRIM38-201ENST00000357085 TFF1P04155 84 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 NPBQ8NG41 125 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 TP53TG1Q9Y2A0 90 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 TRBV30A0A0K0K1B3 111 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 CCL4P13236 92 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 PLA2G5P39877 138 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 CSDC2Q9Y534 153 aaKnown RBP5.16□□□□□ -1.58
TRIM38-201ENST00000357085 FGF23Q9GZV9 251 aaPredicted RBP5.16□□□□□ -1.58
TRIM38-201ENST00000357085 TMEM178BH3BS89 294 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 IGHV1-46P01743 117 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 ZNF134P52741 427 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 DYNLRB2Q8TF09 96 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 HERVK_113P63121 156 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 Q8N7P7 452 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 NEXN-AS1Q8NBZ9 246 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 URB1-AS1Q96HZ7 61 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 ZNF71Q9NQZ8 489 aaPredicted RBP5.16□□□□□ -1.58
TRIM38-201ENST00000357085 SOCS3O14543 225 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 C11orf53Q8IXP5 236 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 METRNQ9UJH8 293 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 NDUFC1O43677 76 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 CCL8P80075 99 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 ODF3Q96PU9 254 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 C15orf32Q32M92 178 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 DKK4Q9UBT3 224 aa5.16□□□□□ -1.58
TRIM38-201ENST00000357085 CDIP1Q9H305 208 aa5.15□□□□□ -1.58
TRIM38-201ENST00000357085 VPREB3Q9UKI3 123 aa5.15□□□□□ -1.58
TRIM38-201ENST00000357085 VWC2LB2RUY7 222 aa5.15□□□□□ -1.58
TRIM38-201ENST00000357085 NSUN5P1Q3KNT7 163 aa5.15□□□□□ -1.58
TRIM38-201ENST00000357085 C9orf47Q6ZRZ4 202 aa5.15□□□□□ -1.58
TRIM38-201ENST00000357085 TRAV12-3A0A0B4J271 114 aa5.15□□□□□ -1.58
TRIM38-201ENST00000357085 IGKV1OR2-108A0A075B7D4 117 aa5.15□□□□□ -1.59
TRIM38-201ENST00000357085 LGALS9O00182 355 aa5.15□□□□□ -1.59
TRIM38-201ENST00000357085 MORN5Q5VZ52 161 aa5.15□□□□□ -1.59
TRIM38-201ENST00000357085 TMEM200BQ69YZ2 307 aa5.15□□□□□ -1.59
TRIM38-201ENST00000357085 Q8TAT8 98 aa5.15□□□□□ -1.59
TRIM38-201ENST00000357085 CHCHD5Q9BSY4 110 aa5.15□□□□□ -1.59
TRIM38-201ENST00000357085 TRAV8-3A0A0A6YYJ7 113 aa5.15□□□□□ -1.59
TRIM38-201ENST00000357085 RPS28P62857 69 aaKnown RBP5.15□□□□□ -1.59
TRIM38-201ENST00000357085 CMC4P56277 68 aaPredicted RBP5.14□□□□□ -1.59
TRIM38-201ENST00000357085 UBE2L6O14933 153 aa5.14□□□□□ -1.59
TRIM38-201ENST00000357085 MLANAQ16655 118 aa5.14□□□□□ -1.59
TRIM38-201ENST00000357085 C10orf55Q5SWW7 151 aa5.14□□□□□ -1.59
TRIM38-201ENST00000357085 CSPG4Q6UVK1 2322 aa5.14□□□□□ -1.59
TRIM38-201ENST00000357085 IGKV2D-26A0A0A0MRZ7 120 aa5.14□□□□□ -1.59
TRIM38-201ENST00000357085 IGHV3-72A0A0B4J1Y9 119 aa5.14□□□□□ -1.59
TRIM38-201ENST00000357085 GPR179Q6PRD1 2367 aa5.14□□□□□ -1.59
TRIM38-201ENST00000357085 IGLV2-11P01706 119 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms