RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 RNF185Q96GF1 192 aa11.74□□□□□ -0.53
PTBP1-203ENST00000356948 IGKV3-7A0A075B6H7 116 aa11.73□□□□□ -0.53
PTBP1-203ENST00000356948 SCGB1C2P0DMR2 95 aa11.73□□□□□ -0.53
PTBP1-203ENST00000356948 TRBV12-3P01733 135 aa11.73□□□□□ -0.53
PTBP1-203ENST00000356948 RPL7P18124 248 aaKnown RBP11.73□□□□□ -0.53
PTBP1-203ENST00000356948 ZC2HC1BQ5TFG8 222 aa11.73□□□□□ -0.53
PTBP1-203ENST00000356948 ZNF493Q6ZR52 646 aa11.73□□□□□ -0.53
PTBP1-203ENST00000356948 ZFAND3Q9H8U3 227 aa11.73□□□□□ -0.53
PTBP1-203ENST00000356948 H7C2G1 150 aa11.73□□□□□ -0.53
PTBP1-203ENST00000356948 PAX8Q06710 450 aa11.73□□□□□ -0.53
PTBP1-203ENST00000356948 CHAC1Q9BUX1 264 aa11.73□□□□□ -0.53
PTBP1-203ENST00000356948 MXRA5Q9NR99 2828 aa11.73□□□□□ -0.53
PTBP1-203ENST00000356948 SORL1Q92673 2214 aa11.72□□□□□ -0.53
PTBP1-203ENST00000356948 IGKV3D-20A0A0C4DH25 116 aa11.72□□□□□ -0.53
PTBP1-203ENST00000356948 BUB3O43684 328 aa11.72□□□□□ -0.53
PTBP1-203ENST00000356948 CCDC144NLQ6NUI1 221 aa11.72□□□□□ -0.53
PTBP1-203ENST00000356948 SCGB1D4Q6XE38 83 aa11.72□□□□□ -0.53
PTBP1-203ENST00000356948 SRSF9Q13242 221 aaKnown RBP eCLIP11.72□□□□□ -0.53
PTBP1-203ENST00000356948 UFSP1Q6NVU6 142 aa11.72□□□□□ -0.53
PTBP1-203ENST00000356948 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.72□□□□□ -0.53
PTBP1-203ENST00000356948 OR9G4Q8NGQ1 327 aa11.72□□□□□ -0.53
PTBP1-203ENST00000356948 SPAG8Q99932 426 aaPredicted RBP11.72□□□□□ -0.53
PTBP1-203ENST00000356948 MYO18BQ8IUG5 2567 aa11.72□□□□□ -0.53
PTBP1-203ENST00000356948 FGF6P10767 208 aa11.72□□□□□ -0.53
PTBP1-203ENST00000356948 PDE6HQ13956 83 aa11.72□□□□□ -0.53
PTBP1-203ENST00000356948 ZNF502Q8TBZ5 544 aa11.72□□□□□ -0.53
PTBP1-203ENST00000356948 AGPAT4-IT1Q9H0P7 198 aa11.72□□□□□ -0.53
PTBP1-203ENST00000356948 HBDP02042 147 aa11.71□□□□□ -0.53
PTBP1-203ENST00000356948 PSMB2P49721 201 aa11.71□□□□□ -0.54
PTBP1-203ENST00000356948 MRPL16Q9NX20 251 aaKnown RBP11.71□□□□□ -0.54
PTBP1-203ENST00000356948 UFC1Q9Y3C8 167 aa11.71□□□□□ -0.54
PTBP1-203ENST00000356948 TRAV8-2A0A0B4J237 113 aa11.71□□□□□ -0.54
PTBP1-203ENST00000356948 IGLC6P0CF74 106 aa11.71□□□□□ -0.54
PTBP1-203ENST00000356948 LEPP41159 167 aa11.71□□□□□ -0.54
PTBP1-203ENST00000356948 NEGR1Q7Z3B1 354 aa11.71□□□□□ -0.54
PTBP1-203ENST00000356948 ANAPC13Q9BS18 74 aa11.71□□□□□ -0.54
PTBP1-203ENST00000356948 CYSLTR1Q9Y271 337 aa11.71□□□□□ -0.54
PTBP1-203ENST00000356948 IGKV2D-26A0A0A0MRZ7 120 aa11.7□□□□□ -0.54
PTBP1-203ENST00000356948 PRR9Q5T870 116 aa11.7□□□□□ -0.54
PTBP1-203ENST00000356948 U3KQK5 164 aa11.7□□□□□ -0.54
PTBP1-203ENST00000356948 B5MCH6 92 aa11.7□□□□□ -0.54
PTBP1-203ENST00000356948 GATD1Q8NB37 220 aa11.7□□□□□ -0.54
PTBP1-203ENST00000356948 HIF1ANQ9NWT6 349 aa11.7□□□□□ -0.54
PTBP1-203ENST00000356948 FBN2P35556 2912 aa11.7□□□□□ -0.54
PTBP1-203ENST00000356948 EDN2P20800 178 aa11.69□□□□□ -0.54
PTBP1-203ENST00000356948 KLRB1Q12918 225 aa11.69□□□□□ -0.54
PTBP1-203ENST00000356948 Q6ZS46 218 aa11.69□□□□□ -0.54
PTBP1-203ENST00000356948 PTH2Q96A98 100 aa11.69□□□□□ -0.54
PTBP1-203ENST00000356948 UNQ9165/PRO28630Q6UXU0 137 aa11.69□□□□□ -0.54
PTBP1-203ENST00000356948 GLMPQ8WWB7 406 aa11.69□□□□□ -0.54
PTBP1-203ENST00000356948 IGSF10Q6WRI0 2623 aa11.69□□□□□ -0.54
PTBP1-203ENST00000356948 CACNA1AO00555 2505 aa11.68□□□□□ -0.54
PTBP1-203ENST00000356948 EBI3Q14213 229 aa11.68□□□□□ -0.54
PTBP1-203ENST00000356948 ZNF469Q96JG9 3925 aaPredicted RBP11.68□□□□□ -0.54
PTBP1-203ENST00000356948 AKAP9Q99996 3911 aa11.68□□□□□ -0.54
PTBP1-203ENST00000356948 PIEZO1Q92508 2521 aa11.68□□□□□ -0.54
PTBP1-203ENST00000356948 IGHV3-11P01762 117 aa11.68□□□□□ -0.54
PTBP1-203ENST00000356948 LMO4P61968 165 aa11.68□□□□□ -0.54
PTBP1-203ENST00000356948 C20orf173Q96LM9 149 aa11.68□□□□□ -0.54
PTBP1-203ENST00000356948 TRAV40A0A0B4J280 105 aa11.67□□□□□ -0.54
PTBP1-203ENST00000356948 LY6EQ16553 131 aa11.67□□□□□ -0.54
PTBP1-203ENST00000356948 DTX2Q86UW9 622 aa11.67□□□□□ -0.54
PTBP1-203ENST00000356948 BOD1L2Q8IYS8 172 aa11.67□□□□□ -0.54
PTBP1-203ENST00000356948 F6UB75 175 aa11.67□□□□□ -0.54
PTBP1-203ENST00000356948 SMIM17P0DL12 118 aa11.67□□□□□ -0.54
PTBP1-203ENST00000356948 C1orf122Q6ZSJ8 110 aa11.67□□□□□ -0.54
PTBP1-203ENST00000356948 ZNF48Q96MX3 618 aaPredicted RBP11.67□□□□□ -0.54
PTBP1-203ENST00000356948 SRD5A1P18405 259 aa11.67□□□□□ -0.54
PTBP1-203ENST00000356948 CENPVL3A0A0U1RRI6 287 aa11.66□□□□□ -0.54
PTBP1-203ENST00000356948 FABP5P3A8MUU1 101 aa11.66□□□□□ -0.54
PTBP1-203ENST00000356948 TNFRSF6BO95407 300 aa11.66□□□□□ -0.54
PTBP1-203ENST00000356948 Q6AWC8 147 aa11.66□□□□□ -0.54
PTBP1-203ENST00000356948 C8orf86Q6ZUL3 223 aa11.66□□□□□ -0.54
PTBP1-203ENST00000356948 MRAP2Q96G30 205 aa11.66□□□□□ -0.54
PTBP1-203ENST00000356948 TRBV20-1A0A075B6N2 111 aa11.65□□□□□ -0.54
PTBP1-203ENST00000356948 TRBV25-1A0A075B6N4 114 aa11.65□□□□□ -0.54
PTBP1-203ENST00000356948 FAM110DQ8TAY7 271 aaPredicted RBP11.65□□□□□ -0.54
PTBP1-203ENST00000356948 SVIPQ8NHG7 77 aa11.64□□□□□ -0.55
PTBP1-203ENST00000356948 GATA3P23771 443 aa11.64□□□□□ -0.55
PTBP1-203ENST00000356948 UBE2E1P51965 193 aa11.64□□□□□ -0.55
PTBP1-203ENST00000356948 RNF183Q96D59 192 aa11.64□□□□□ -0.55
PTBP1-203ENST00000356948 PGPEP1Q9NXJ5 209 aa11.64□□□□□ -0.55
PTBP1-203ENST00000356948 EFNA4P52798 201 aa11.64□□□□□ -0.55
PTBP1-203ENST00000356948 TMEM158Q8WZ71 300 aa11.64□□□□□ -0.55
PTBP1-203ENST00000356948 NIPBLQ6KC79 2804 aaeCLIP11.63□□□□□ -0.554e-6■■□□□ 12.3
PTBP1-203ENST00000356948 TMEM8BA6NDV4 472 aa11.63□□□□□ -0.55
PTBP1-203ENST00000356948 MT-ATP8P03928 68 aa11.63□□□□□ -0.55
PTBP1-203ENST00000356948 MINOS1Q5TGZ0 78 aa11.63□□□□□ -0.55
PTBP1-203ENST00000356948 MAP1LC3AQ9H492 121 aa11.63□□□□□ -0.55
PTBP1-203ENST00000356948 MINOS1-NBL1R4GNA1 71 aa11.63□□□□□ -0.55
PTBP1-203ENST00000356948 IGHV7-4-1A0A0J9YVY3 117 aa11.63□□□□□ -0.55
PTBP1-203ENST00000356948 A0A1B0GW15 77 aa11.63□□□□□ -0.55
PTBP1-203ENST00000356948 IGKCP01834 107 aa11.63□□□□□ -0.55
PTBP1-203ENST00000356948 C3orf56Q8N813 242 aa11.63□□□□□ -0.55
PTBP1-203ENST00000356948 NPFFO15130 113 aa11.63□□□□□ -0.55
PTBP1-203ENST00000356948 C5orf56Q8N8D9 126 aa11.63□□□□□ -0.55
PTBP1-203ENST00000356948 PIFOQ8TCI5 191 aa11.63□□□□□ -0.55
PTBP1-203ENST00000356948 MYOZ3Q8TDC0 251 aa11.63□□□□□ -0.55
PTBP1-203ENST00000356948 SPANXB1Q9NS25 103 aaPredicted RBP11.63□□□□□ -0.55
PTBP1-203ENST00000356948 COX8CQ7Z4L0 72 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms