RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 ODF3Q96PU9 254 aa17.64■□□□□ 0.41
CHKA-202ENST00000356135 TRBV7-9A0A0J9YWB2 115 aa17.63■□□□□ 0.41
CHKA-202ENST00000356135 IGHV4-30-4P0DP06 118 aa17.63■□□□□ 0.41
CHKA-202ENST00000356135 LEPP41159 167 aa17.63■□□□□ 0.41
CHKA-202ENST00000356135 CDKN1BP46527 198 aa17.63■□□□□ 0.41
CHKA-202ENST00000356135 FOXA3P55318 350 aaPredicted RBP17.63■□□□□ 0.41
CHKA-202ENST00000356135 KLLNB2CW77 178 aa17.63■□□□□ 0.41
CHKA-202ENST00000356135 RASL11AQ6T310 242 aa17.63■□□□□ 0.41
CHKA-202ENST00000356135 FRZBQ92765 325 aa17.63■□□□□ 0.41
CHKA-202ENST00000356135 CLUHP3Q96NS8 147 aa17.63■□□□□ 0.41
CHKA-202ENST00000356135 FABP5P3A8MUU1 101 aa17.62■□□□□ 0.41
CHKA-202ENST00000356135 CRXO43186 299 aaPredicted RBP17.62■□□□□ 0.41
CHKA-202ENST00000356135 KPRPQ5T749 579 aaPredicted RBP17.62■□□□□ 0.41
CHKA-202ENST00000356135 ATP5L2Q7Z4Y8 100 aa17.62■□□□□ 0.41
CHKA-202ENST00000356135 GNB1LQ9BYB4 327 aa17.62■□□□□ 0.41
CHKA-202ENST00000356135 HIST1H2BKO60814 126 aa17.61■□□□□ 0.41
CHKA-202ENST00000356135 HIST1H2BJP06899 126 aa17.61■□□□□ 0.41
CHKA-202ENST00000356135 HIST1H2BOP23527 126 aa17.61■□□□□ 0.41
CHKA-202ENST00000356135 HIST1H2BBP33778 126 aa17.61■□□□□ 0.41
CHKA-202ENST00000356135 HIST1H2BDP58876 126 aa17.61■□□□□ 0.41
CHKA-202ENST00000356135 HIST1H2BCP62807 126 aa17.61■□□□□ 0.41
CHKA-202ENST00000356135 HIST2H2BEQ16778 126 aa17.61■□□□□ 0.41
CHKA-202ENST00000356135 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.61■□□□□ 0.41
CHKA-202ENST00000356135 GFI1BQ5VTD9 330 aa17.61■□□□□ 0.41
CHKA-202ENST00000356135 WDR73Q6P4I2 378 aa17.61■□□□□ 0.41
CHKA-202ENST00000356135 HIST1H2BHQ93079 126 aa17.61■□□□□ 0.41
CHKA-202ENST00000356135 HIST1H2BNQ99877 126 aa17.61■□□□□ 0.41
CHKA-202ENST00000356135 HIST1H2BMQ99879 126 aa17.61■□□□□ 0.41
CHKA-202ENST00000356135 XCL2Q9UBD3 114 aa17.61■□□□□ 0.41
CHKA-202ENST00000356135 TRAPPC1Q9Y5R8 145 aa17.61■□□□□ 0.41
CHKA-202ENST00000356135 TMEM189A5PLL7 270 aa17.61■□□□□ 0.41
CHKA-202ENST00000356135 SPINK4O60575 86 aa17.61■□□□□ 0.41
CHKA-202ENST00000356135 GIG44P09565 113 aaPredicted RBP17.61■□□□□ 0.41
CHKA-202ENST00000356135 TSPOP30536 169 aa17.61■□□□□ 0.41
CHKA-202ENST00000356135 MRPL54Q6P161 138 aaKnown RBP17.61■□□□□ 0.41
CHKA-202ENST00000356135 TRAV12-3A0A0B4J271 114 aa17.6■□□□□ 0.41
CHKA-202ENST00000356135 XKRY2A2RUG3 117 aa17.6■□□□□ 0.41
CHKA-202ENST00000356135 MT-ND6P03923 174 aa17.6■□□□□ 0.41
CHKA-202ENST00000356135 FRMD6-AS1P0C7T7 363 aa17.6■□□□□ 0.41
CHKA-202ENST00000356135 TRGC1P0CF51 173 aa17.6■□□□□ 0.41
CHKA-202ENST00000356135 GZMBP10144 247 aa17.6■□□□□ 0.41
CHKA-202ENST00000356135 Q6AWC8 147 aa17.6■□□□□ 0.41
CHKA-202ENST00000356135 MGAM2Q2M2H8 2515 aa17.6■□□□□ 0.41
CHKA-202ENST00000356135 RPS20P60866 119 aaKnown RBP17.59■□□□□ 0.41
CHKA-202ENST00000356135 FABP9Q0Z7S8 132 aa17.59■□□□□ 0.41
CHKA-202ENST00000356135 A0A1B0GXF2 115 aa17.58■□□□□ 0.41
CHKA-202ENST00000356135 RBMY1A1P0DJD3 496 aaKnown RBP17.58■□□□□ 0.41
CHKA-202ENST00000356135 RBMY1CP0DJD4 496 aa17.58■□□□□ 0.41
CHKA-202ENST00000356135 RBMY1FQ15415 496 aaKnown RBP17.58■□□□□ 0.41
CHKA-202ENST00000356135 LINC01559Q495D7 138 aa17.58■□□□□ 0.41
CHKA-202ENST00000356135 LOC102724200A0A096LPH7 203 aaPredicted RBP17.58■□□□□ 0.4
CHKA-202ENST00000356135 C7orf71A4D174 169 aa17.58■□□□□ 0.4
CHKA-202ENST00000356135 SNURFLB1AK76 121 aa17.58■□□□□ 0.4
CHKA-202ENST00000356135 S100A6P06703 90 aa17.58■□□□□ 0.4
CHKA-202ENST00000356135 NUTF2P61970 127 aaKnown RBP17.58■□□□□ 0.4
CHKA-202ENST00000356135 TMEM136Q6ZRR5 245 aa17.58■□□□□ 0.4
CHKA-202ENST00000356135 PGLYRP4Q96LB8 373 aa17.58■□□□□ 0.4
CHKA-202ENST00000356135 C11orf21Q9P2W6 132 aa17.57■□□□□ 0.4
CHKA-202ENST00000356135 ZNF324O75467 553 aaPredicted RBP17.56■□□□□ 0.4
CHKA-202ENST00000356135 HLA-DQA1P01909 254 aa17.56■□□□□ 0.4
CHKA-202ENST00000356135 CSTL1Q9H114 145 aa17.56■□□□□ 0.4
CHKA-202ENST00000356135 NOTCH1P46531 2555 aa17.56■□□□□ 0.4
CHKA-202ENST00000356135 MRPL18Q9H0U6 180 aaKnown RBP17.56■□□□□ 0.4
CHKA-202ENST00000356135 C5orf52A6NGY3 159 aa17.55■□□□□ 0.4
CHKA-202ENST00000356135 HBBP68871 147 aa17.55■□□□□ 0.4
CHKA-202ENST00000356135 MORN3Q6PF18 240 aaPredicted RBP17.55■□□□□ 0.4
CHKA-202ENST00000356135 ZNF575Q86XF7 245 aa17.55■□□□□ 0.4
CHKA-202ENST00000356135 TRAV21A0A0B4J279 112 aa17.54■□□□□ 0.4
CHKA-202ENST00000356135 K7EIL1 84 aa17.54■□□□□ 0.4
CHKA-202ENST00000356135 ORM1P02763 201 aa17.54■□□□□ 0.4
CHKA-202ENST00000356135 MUC21Q5SSG8 566 aa17.54■□□□□ 0.4
CHKA-202ENST00000356135 NAGKQ9UJ70 344 aa17.54■□□□□ 0.4
CHKA-202ENST00000356135 TMSB15BA0A087X1C1 80 aa17.53■□□□□ 0.4
CHKA-202ENST00000356135 NBEAL1Q6ZS30 2694 aa17.53■□□□□ 0.4
CHKA-202ENST00000356135 PRM2P04554 102 aa17.53■□□□□ 0.4
CHKA-202ENST00000356135 SNRPEP62304 92 aaKnown RBP17.53■□□□□ 0.4
CHKA-202ENST00000356135 A0A1B0GUT8 65 aa17.52■□□□□ 0.4
CHKA-202ENST00000356135 IGLC6P0CF74 106 aa17.52■□□□□ 0.4
CHKA-202ENST00000356135 C1orf158Q8N1D5 194 aa17.52■□□□□ 0.4
CHKA-202ENST00000356135 IGKV3D-20A0A0C4DH25 116 aa17.51■□□□□ 0.39
CHKA-202ENST00000356135 INSP01308 110 aa17.51■□□□□ 0.39
CHKA-202ENST00000356135 AMBPP02760 352 aa17.51■□□□□ 0.39
CHKA-202ENST00000356135 CTRLP40313 264 aa17.51■□□□□ 0.39
CHKA-202ENST00000356135 RAB4BP61018 213 aa17.51■□□□□ 0.39
CHKA-202ENST00000356135 CSNK1G2-AS1Q8NCQ2 148 aa17.51■□□□□ 0.39
CHKA-202ENST00000356135 IGHV3OR16-12A0A075B7B8 117 aa17.51■□□□□ 0.39
CHKA-202ENST00000356135 A8MZ25 164 aa17.51■□□□□ 0.39
CHKA-202ENST00000356135 A0A1B0GW15 77 aa17.5■□□□□ 0.39
CHKA-202ENST00000356135 ARMS2P0C7Q2 107 aa17.5■□□□□ 0.39
CHKA-202ENST00000356135 NDUFA6P56556 154 aa17.5■□□□□ 0.39
CHKA-202ENST00000356135 ANXA2RQ3ZCQ2 193 aa17.5■□□□□ 0.39
CHKA-202ENST00000356135 UBE2CO00762 179 aa17.49■□□□□ 0.39
CHKA-202ENST00000356135 HTN1P15515 57 aa17.49■□□□□ 0.39
CHKA-202ENST00000356135 CAMPP49913 170 aa17.49■□□□□ 0.39
CHKA-202ENST00000356135 RIGQ13278 110 aa17.49■□□□□ 0.39
CHKA-202ENST00000356135 DEFB121Q5J5C9 76 aa17.49■□□□□ 0.39
CHKA-202ENST00000356135 LYZL1Q6UWQ5 148 aa17.49■□□□□ 0.39
CHKA-202ENST00000356135 FER1L6-AS1Q8NA97 138 aa17.49■□□□□ 0.39
CHKA-202ENST00000356135 APOC4P55056 127 aa17.48■□□□□ 0.39
CHKA-202ENST00000356135 BORCS7Q96B45 105 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms