RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ZNF134P52741 427 aa13.78□□□□□ -0.2
COL27A1-201ENST00000356083 IGHV2-70DA0A0C4DH43 119 aa13.78□□□□□ -0.2
COL27A1-201ENST00000356083 A0A1B0GX51 115 aa13.77□□□□□ -0.2
COL27A1-201ENST00000356083 IFI6P09912 130 aa13.77□□□□□ -0.2
COL27A1-201ENST00000356083 WDR86Q86TI4 376 aa13.77□□□□□ -0.2
COL27A1-201ENST00000356083 ETV2O00321 342 aaPredicted RBP13.77□□□□□ -0.2
COL27A1-201ENST00000356083 PFN1P07737 140 aaKnown RBP13.77□□□□□ -0.2
COL27A1-201ENST00000356083 GP9P14770 177 aa13.77□□□□□ -0.2
COL27A1-201ENST00000356083 AMTNQ6UX39 209 aa13.77□□□□□ -0.2
COL27A1-201ENST00000356083 H0YIZ8 118 aa13.77□□□□□ -0.2
COL27A1-201ENST00000356083 BAALC-AS2P0C853 105 aa13.77□□□□□ -0.21
COL27A1-201ENST00000356083 RHOHQ15669 191 aa13.77□□□□□ -0.21
COL27A1-201ENST00000356083 TRBV20-1A0A075B6N2 111 aa13.77□□□□□ -0.21
COL27A1-201ENST00000356083 SLURP1P55000 103 aa13.77□□□□□ -0.21
COL27A1-201ENST00000356083 FAM120AOSQ5T036 256 aa13.77□□□□□ -0.21
COL27A1-201ENST00000356083 FAM231BA6NCW3 169 aa13.77□□□□□ -0.21
COL27A1-201ENST00000356083 K7ERJ3 54 aa13.77□□□□□ -0.21
COL27A1-201ENST00000356083 HIST2H2BCQ6DN03 193 aa13.77□□□□□ -0.21
COL27A1-201ENST00000356083 GNRH2O43555 120 aa13.77□□□□□ -0.21
COL27A1-201ENST00000356083 MRPL51Q4U2R6 128 aaKnown RBP13.77□□□□□ -0.21
COL27A1-201ENST00000356083 HIST3H2BBQ8N257 126 aa13.77□□□□□ -0.21
COL27A1-201ENST00000356083 PRO1854Q9UHT4 67 aa13.76□□□□□ -0.21
COL27A1-201ENST00000356083 K7ENP7 123 aa13.76□□□□□ -0.21
COL27A1-201ENST00000356083 DUX4L9Q6RFH8 374 aaPredicted RBP13.76□□□□□ -0.21
COL27A1-201ENST00000356083 TMEM75Q8N9X5 138 aa13.76□□□□□ -0.21
COL27A1-201ENST00000356083 A0A096LNI7 61 aa13.76□□□□□ -0.21
COL27A1-201ENST00000356083 LAIR2Q6ISS4 152 aa13.76□□□□□ -0.21
COL27A1-201ENST00000356083 MRPL53Q96EL3 112 aaKnown RBP13.76□□□□□ -0.21
COL27A1-201ENST00000356083 K7EMI3 77 aa13.76□□□□□ -0.21
COL27A1-201ENST00000356083 NCR3O14931 201 aa13.76□□□□□ -0.21
COL27A1-201ENST00000356083 IGHV4-59P01825 116 aa13.76□□□□□ -0.21
COL27A1-201ENST00000356083 Q86TA4 180 aa13.76□□□□□ -0.21
COL27A1-201ENST00000356083 MP68P56378 58 aa13.76□□□□□ -0.21
COL27A1-201ENST00000356083 ZNF362Q5T0B9 420 aaPredicted RBP13.76□□□□□ -0.21
COL27A1-201ENST00000356083 TMEM14BQ9NUH8 114 aa13.76□□□□□ -0.21
COL27A1-201ENST00000356083 UTF1Q5T230 341 aa13.75□□□□□ -0.21
COL27A1-201ENST00000356083 VSIG2Q96IQ7 327 aa13.75□□□□□ -0.21
COL27A1-201ENST00000356083 SHANK2-AS3Q9BTD1 123 aa13.75□□□□□ -0.21
COL27A1-201ENST00000356083 CTSGP08311 255 aa13.75□□□□□ -0.21
COL27A1-201ENST00000356083 UBE2V1Q13404 147 aa13.75□□□□□ -0.21
COL27A1-201ENST00000356083 Q9H8V8 135 aa13.75□□□□□ -0.21
COL27A1-201ENST00000356083 ICOSQ9Y6W8 199 aa13.75□□□□□ -0.21
COL27A1-201ENST00000356083 ZNF581Q9P0T4 197 aa13.75□□□□□ -0.21
COL27A1-201ENST00000356083 SPART-AS1P0CW21 52 aa13.75□□□□□ -0.21
COL27A1-201ENST00000356083 WIPF3A6NGB9 483 aa13.74□□□□□ -0.21
COL27A1-201ENST00000356083 NOTCH2Q04721 2471 aa13.74□□□□□ -0.21
COL27A1-201ENST00000356083 MRPL36Q9P0J6 103 aaKnown RBP13.74□□□□□ -0.21
COL27A1-201ENST00000356083 IGLV3-12A0A075B6K2 115 aa13.74□□□□□ -0.21
COL27A1-201ENST00000356083 IGKV3D-7A0A0C4DH55 119 aa13.74□□□□□ -0.21
COL27A1-201ENST00000356083 LRRC37AA6NMS7 1700 aa13.74□□□□□ -0.21
COL27A1-201ENST00000356083 H3BMG7 143 aa13.74□□□□□ -0.21
COL27A1-201ENST00000356083 PDE6HQ13956 83 aa13.74□□□□□ -0.21
COL27A1-201ENST00000356083 C15orf62A8K5M9 175 aa13.73□□□□□ -0.21
COL27A1-201ENST00000356083 SIP14410 1827 aa13.73□□□□□ -0.21
COL27A1-201ENST00000356083 GFI1Q99684 422 aa13.73□□□□□ -0.21
COL27A1-201ENST00000356083 TNS1Q9HBL0 1735 aaKnown RBP13.73□□□□□ -0.21
COL27A1-201ENST00000356083 A0A1B0GW64 132 aa13.73□□□□□ -0.21
COL27A1-201ENST00000356083 C5orf63A6NC05 138 aa13.73□□□□□ -0.21
COL27A1-201ENST00000356083 COX7A2LO14548 114 aa13.73□□□□□ -0.21
COL27A1-201ENST00000356083 NREPQ16612 68 aa13.73□□□□□ -0.21
COL27A1-201ENST00000356083 NTN3O00634 580 aaPredicted RBP13.73□□□□□ -0.21
COL27A1-201ENST00000356083 SPTSSBQ8NFR3 76 aa13.73□□□□□ -0.21
COL27A1-201ENST00000356083 IGKV2-24A0A0C4DH68 120 aa13.72□□□□□ -0.21
COL27A1-201ENST00000356083 HIGD2BQ4VC39 106 aa13.72□□□□□ -0.21
COL27A1-201ENST00000356083 VWCEQ96DN2 955 aa13.72□□□□□ -0.21
COL27A1-201ENST00000356083 DEFB112Q30KQ8 113 aa13.71□□□□□ -0.21
COL27A1-201ENST00000356083 Q6P435 159 aa13.71□□□□□ -0.21
COL27A1-201ENST00000356083 WDR90Q96KV7 1748 aa13.71□□□□□ -0.21
COL27A1-201ENST00000356083 CEND1Q8N111 149 aa13.71□□□□□ -0.21
COL27A1-201ENST00000356083 IL17DQ8TAD2 202 aa13.71□□□□□ -0.21
COL27A1-201ENST00000356083 TANC1Q9C0D5 1861 aa13.71□□□□□ -0.21
COL27A1-201ENST00000356083 ZFP36P26651 326 aaKnown RBP13.71□□□□□ -0.21
COL27A1-201ENST00000356083 MPLKIPQ8TAP9 179 aa13.71□□□□□ -0.22
COL27A1-201ENST00000356083 NDUFA4O00483 81 aa13.71□□□□□ -0.22
COL27A1-201ENST00000356083 ELANEP08246 267 aa13.7□□□□□ -0.22
COL27A1-201ENST00000356083 LINC00114Q6XXX2 140 aa13.7□□□□□ -0.22
COL27A1-201ENST00000356083 FGF16O43320 207 aa13.7□□□□□ -0.22
COL27A1-201ENST00000356083 MRPL35Q9NZE8 188 aaKnown RBP13.7□□□□□ -0.22
COL27A1-201ENST00000356083 MRPL23Q16540 153 aaKnown RBP13.7□□□□□ -0.22
COL27A1-201ENST00000356083 ETDBQ3ZM63 59 aa13.7□□□□□ -0.22
COL27A1-201ENST00000356083 LY6G6FQ5SQ64 297 aa13.7□□□□□ -0.22
COL27A1-201ENST00000356083 C17orf77Q96MU5 243 aa13.7□□□□□ -0.22
COL27A1-201ENST00000356083 C1orf194Q5T5A4 169 aa13.69□□□□□ -0.22
COL27A1-201ENST00000356083 MRPL27Q9P0M9 148 aaKnown RBP13.69□□□□□ -0.22
COL27A1-201ENST00000356083 RAI1Q7Z5J4 1906 aaPredicted RBP13.69□□□□□ -0.22
COL27A1-201ENST00000356083 HLA-DMBP28068 263 aa13.69□□□□□ -0.22
COL27A1-201ENST00000356083 PRSS46E5RG02 174 aa13.69□□□□□ -0.22
COL27A1-201ENST00000356083 IGLV3-19P01714 112 aa13.69□□□□□ -0.22
COL27A1-201ENST00000356083 CRYGSP22914 178 aa13.69□□□□□ -0.22
COL27A1-201ENST00000356083 SLC25A29Q8N8R3 303 aa13.69□□□□□ -0.22
COL27A1-201ENST00000356083 NRGNQ92686 78 aa13.69□□□□□ -0.22
COL27A1-201ENST00000356083 CYYR1Q96J86 154 aa13.69□□□□□ -0.22
COL27A1-201ENST00000356083 COL24A1Q17RW2 1714 aa13.69□□□□□ -0.22
COL27A1-201ENST00000356083 Q8N8P6 123 aa13.69□□□□□ -0.22
COL27A1-201ENST00000356083 DEFB135Q30KP9 77 aa13.68□□□□□ -0.22
COL27A1-201ENST00000356083 BVES-AS1Q5T3Y7 98 aa13.68□□□□□ -0.22
COL27A1-201ENST00000356083 DYNAPQ8N1N2 210 aa13.68□□□□□ -0.22
COL27A1-201ENST00000356083 J3QLI3 93 aa13.68□□□□□ -0.22
COL27A1-201ENST00000356083 J3QQQ9 107 aa13.68□□□□□ -0.22
COL27A1-201ENST00000356083 Q6ZS92 163 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms