RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 PSMG4Q5JS54 123 aa11.92□□□□□ -0.5
STRN3-201ENST00000355683 MEIG1Q5JSS6 88 aa11.92□□□□□ -0.5
STRN3-201ENST00000355683 OR9G4Q8NGQ1 327 aa11.92□□□□□ -0.5
STRN3-201ENST00000355683 SRSF8Q9BRL6 282 aaKnown RBP11.92□□□□□ -0.5
STRN3-201ENST00000355683 USP24Q9UPU5 2620 aa11.92□□□□□ -0.5
STRN3-201ENST00000355683 SMG1Q96Q15 3661 aaKnown RBP11.92□□□□□ -0.5
STRN3-201ENST00000355683 ESDP10768 282 aa11.92□□□□□ -0.5
STRN3-201ENST00000355683 ID1P41134 155 aa11.92□□□□□ -0.5
STRN3-201ENST00000355683 TSSC4Q9Y5U2 329 aaPredicted RBP11.92□□□□□ -0.5
STRN3-201ENST00000355683 GP9P14770 177 aa11.91□□□□□ -0.5
STRN3-201ENST00000355683 SUMO2P61956 95 aaKnown RBP11.91□□□□□ -0.5
STRN3-201ENST00000355683 ZNF562Q6V9R5 426 aa11.91□□□□□ -0.5
STRN3-201ENST00000355683 BLCAPP62952 87 aa11.91□□□□□ -0.5
STRN3-201ENST00000355683 OR5A1Q8NGJ0 315 aa11.91□□□□□ -0.5
STRN3-201ENST00000355683 DYNLRB2Q8TF09 96 aa11.91□□□□□ -0.5
STRN3-201ENST00000355683 PRR25Q96S07 402 aa11.91□□□□□ -0.5
STRN3-201ENST00000355683 TRAV41A0A0B4J266 112 aa11.9□□□□□ -0.5
STRN3-201ENST00000355683 Q6ZQT7 251 aa11.9□□□□□ -0.5
STRN3-201ENST00000355683 COL5A1P20908 1838 aaPredicted RBP11.9□□□□□ -0.5
STRN3-201ENST00000355683 HOXB4P17483 251 aaPredicted RBP11.9□□□□□ -0.5
STRN3-201ENST00000355683 LAGE3Q14657 143 aa11.9□□□□□ -0.5
STRN3-201ENST00000355683 FAM104BQ5XKR9 115 aa11.9□□□□□ -0.5
STRN3-201ENST00000355683 TOMM7Q9P0U1 55 aa11.9□□□□□ -0.5
STRN3-201ENST00000355683 MRPL35Q9NZE8 188 aaKnown RBP11.9□□□□□ -0.5
STRN3-201ENST00000355683 PAX2Q02962 417 aa11.89□□□□□ -0.51
STRN3-201ENST00000355683 SIGLEC15Q6ZMC9 328 aa11.89□□□□□ -0.51
STRN3-201ENST00000355683 TEX22C9J3V5 150 aa11.89□□□□□ -0.51
STRN3-201ENST00000355683 PPBPP02775 128 aa11.89□□□□□ -0.51
STRN3-201ENST00000355683 SNCGO76070 127 aa11.89□□□□□ -0.51
STRN3-201ENST00000355683 COX8AP10176 69 aa11.89□□□□□ -0.51
STRN3-201ENST00000355683 SH2D6Q7Z4S9 175 aa11.89□□□□□ -0.51
STRN3-201ENST00000355683 ITLN2Q8WWU7 325 aaPredicted RBP11.88□□□□□ -0.51
STRN3-201ENST00000355683 ZNF747Q9BV97 191 aa11.88□□□□□ -0.51
STRN3-201ENST00000355683 KLK9Q9UKQ9 250 aa11.88□□□□□ -0.51
STRN3-201ENST00000355683 NPIPB6E9PJ23 425 aa11.88□□□□□ -0.51
STRN3-201ENST00000355683 I3L2K1 104 aa11.88□□□□□ -0.51
STRN3-201ENST00000355683 NPFFO15130 113 aa11.88□□□□□ -0.51
STRN3-201ENST00000355683 IGLV1-47P01700 117 aa11.87□□□□□ -0.51
STRN3-201ENST00000355683 IGHV2-70DA0A0C4DH43 119 aa11.87□□□□□ -0.51
STRN3-201ENST00000355683 GAS8-AS1O95177 125 aa11.87□□□□□ -0.51
STRN3-201ENST00000355683 RNASE13Q5GAN3 156 aaKnown RBP11.87□□□□□ -0.51
STRN3-201ENST00000355683 PRORYQ9H606 182 aa11.87□□□□□ -0.51
STRN3-201ENST00000355683 PCSK5Q92824 1860 aa11.87□□□□□ -0.51
STRN3-201ENST00000355683 GNRH2O43555 120 aa11.87□□□□□ -0.51
STRN3-201ENST00000355683 IGF1P05019 195 aa11.87□□□□□ -0.51
STRN3-201ENST00000355683 FAM231DQ6ZW35 169 aa11.87□□□□□ -0.51
STRN3-201ENST00000355683 PIMREGQ9BSJ6 248 aa11.87□□□□□ -0.51
STRN3-201ENST00000355683 TRBV12-3P01733 135 aa11.86□□□□□ -0.51
STRN3-201ENST00000355683 ZNF80P51504 273 aaPredicted RBP11.86□□□□□ -0.51
STRN3-201ENST00000355683 RAB9AP51151 201 aa11.86□□□□□ -0.51
STRN3-201ENST00000355683 ANXA2RQ3ZCQ2 193 aa11.86□□□□□ -0.51
STRN3-201ENST00000355683 TNRC6BQ9UPQ9 1833 aaKnown RBP11.86□□□□□ -0.51
STRN3-201ENST00000355683 LTAP01374 205 aa11.86□□□□□ -0.51
STRN3-201ENST00000355683 TNFRSF14Q92956 283 aa11.86□□□□□ -0.51
STRN3-201ENST00000355683 ZNF625Q96I27 306 aaPredicted RBP11.86□□□□□ -0.51
STRN3-201ENST00000355683 C9orf118A6NHY6 69 aa11.86□□□□□ -0.51
STRN3-201ENST00000355683 THAP8Q8NA92 274 aa11.86□□□□□ -0.51
STRN3-201ENST00000355683 SYT8Q8NBV8 401 aa11.86□□□□□ -0.51
STRN3-201ENST00000355683 CFHR4Q92496 578 aa11.86□□□□□ -0.51
STRN3-201ENST00000355683 RHPN1-AS1Q9BWJ2 59 aa11.86□□□□□ -0.51
STRN3-201ENST00000355683 AGPAT4-IT1Q9H0P7 198 aa11.86□□□□□ -0.51
STRN3-201ENST00000355683 CSTL1Q9H114 145 aa11.86□□□□□ -0.51
STRN3-201ENST00000355683 VCX2Q9H322 139 aa11.86□□□□□ -0.51
STRN3-201ENST00000355683 CTRLP40313 264 aa11.85□□□□□ -0.51
STRN3-201ENST00000355683 SYNJ2BPP57105 145 aa11.85□□□□□ -0.51
STRN3-201ENST00000355683 CKS1BP61024 79 aa11.85□□□□□ -0.51
STRN3-201ENST00000355683 SPATA12Q7Z6I5 190 aa11.85□□□□□ -0.51
STRN3-201ENST00000355683 CSMD1Q96PZ7 3565 aa11.85□□□□□ -0.51
STRN3-201ENST00000355683 TEX48A0A1B0GUV7 120 aa11.85□□□□□ -0.51
STRN3-201ENST00000355683 LINC01549A6NIU2 74 aa11.85□□□□□ -0.51
STRN3-201ENST00000355683 TMEM238C9JI98 176 aa11.85□□□□□ -0.51
STRN3-201ENST00000355683 Q8N976 141 aa11.85□□□□□ -0.51
STRN3-201ENST00000355683 OR13C6PQ8NH95 151 aa11.85□□□□□ -0.51
STRN3-201ENST00000355683 CTSGP08311 255 aa11.85□□□□□ -0.51
STRN3-201ENST00000355683 ANAPC13Q9BS18 74 aa11.85□□□□□ -0.51
STRN3-201ENST00000355683 NPFFR1Q9GZQ6 430 aa11.85□□□□□ -0.51
STRN3-201ENST00000355683 FNDC10F2Z333 226 aa11.84□□□□□ -0.51
STRN3-201ENST00000355683 H3BRN7 92 aa11.84□□□□□ -0.51
STRN3-201ENST00000355683 TSPAN13O95857 204 aa11.84□□□□□ -0.51
STRN3-201ENST00000355683 PPP1R17O96001 155 aa11.84□□□□□ -0.51
STRN3-201ENST00000355683 IGHV3-53P01767 116 aa11.84□□□□□ -0.51
STRN3-201ENST00000355683 DEFB136Q30KP8 78 aa11.84□□□□□ -0.51
STRN3-201ENST00000355683 C8orf86Q6ZUL3 223 aa11.84□□□□□ -0.51
STRN3-201ENST00000355683 MRPL52Q86TS9 123 aaKnown RBP11.84□□□□□ -0.51
STRN3-201ENST00000355683 AGRNO00468 2067 aa11.84□□□□□ -0.51
STRN3-201ENST00000355683 FLNCQ14315 2725 aa11.84□□□□□ -0.51
STRN3-201ENST00000355683 IGHV7-81A0A0B4J1V7 117 aa11.84□□□□□ -0.51
STRN3-201ENST00000355683 SLC25A16P16260 332 aa11.84□□□□□ -0.51
STRN3-201ENST00000355683 SPINK13Q1W4C9 94 aa11.84□□□□□ -0.51
STRN3-201ENST00000355683 DTX2Q86UW9 622 aa11.84□□□□□ -0.51
STRN3-201ENST00000355683 DEFB125Q8N687 156 aa11.84□□□□□ -0.51
STRN3-201ENST00000355683 TNFRSF18Q9Y5U5 241 aa11.84□□□□□ -0.51
STRN3-201ENST00000355683 SVEP1Q4LDE5 3571 aa11.84□□□□□ -0.51
STRN3-201ENST00000355683 IGHV4-38-2P0DP08 117 aa11.84□□□□□ -0.51
STRN3-201ENST00000355683 ADORA2A-AS1P86434 159 aa11.84□□□□□ -0.51
STRN3-201ENST00000355683 TRAV21A0A0B4J279 112 aa11.83□□□□□ -0.52
STRN3-201ENST00000355683 SLC50A1Q9BRV3 221 aa11.83□□□□□ -0.52
STRN3-201ENST00000355683 CHD6Q8TD26 2715 aa11.83□□□□□ -0.52
STRN3-201ENST00000355683 TAX1BP3O14907 124 aa11.83□□□□□ -0.52
STRN3-201ENST00000355683 IGHV3-16A0A0C4DH30 117 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms