RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 SHANK1Q9Y566 2161 aa7.92□□□□□ -1.14
COL11A1-201ENST00000353414 DEFB135Q30KP9 77 aa7.92□□□□□ -1.14
COL11A1-201ENST00000353414 CAMK2N2Q96S95 79 aa7.92□□□□□ -1.14
COL11A1-201ENST00000353414 A0A096LNI7 61 aa7.92□□□□□ -1.14
COL11A1-201ENST00000353414 ZNF503-AS2A6NEH8 195 aa7.92□□□□□ -1.14
COL11A1-201ENST00000353414 CSRP3P50461 194 aa7.92□□□□□ -1.14
COL11A1-201ENST00000353414 NDUFA12Q9UI09 145 aa7.92□□□□□ -1.14
COL11A1-201ENST00000353414 MRPL23Q16540 153 aaKnown RBP7.92□□□□□ -1.14
COL11A1-201ENST00000353414 NPSP0C0P6 89 aa7.91□□□□□ -1.14
COL11A1-201ENST00000353414 C17orf58Q2M2W7 97 aa7.91□□□□□ -1.14
COL11A1-201ENST00000353414 TANC1Q9C0D5 1861 aa7.91□□□□□ -1.14
COL11A1-201ENST00000353414 GAGE12HA6NDE8 117 aa7.91□□□□□ -1.14
COL11A1-201ENST00000353414 B5MCH6 92 aa7.91□□□□□ -1.14
COL11A1-201ENST00000353414 C9orf66Q5T8R8 295 aa7.91□□□□□ -1.14
COL11A1-201ENST00000353414 AMTNQ6UX39 209 aa7.91□□□□□ -1.14
COL11A1-201ENST00000353414 ELANEP08246 267 aa7.91□□□□□ -1.14
COL11A1-201ENST00000353414 H3BMG7 143 aa7.91□□□□□ -1.14
COL11A1-201ENST00000353414 ANKRD29Q8N6D5 301 aa7.91□□□□□ -1.14
COL11A1-201ENST00000353414 COX7B2Q8TF08 81 aa7.91□□□□□ -1.14
COL11A1-201ENST00000353414 TRAV4A0A0B4J268 109 aa7.91□□□□□ -1.14
COL11A1-201ENST00000353414 DAND5Q8N907 189 aa7.91□□□□□ -1.14
COL11A1-201ENST00000353414 J3QRE1 110 aa7.91□□□□□ -1.14
COL11A1-201ENST00000353414 RNF5Q99942 180 aa7.91□□□□□ -1.14
COL11A1-201ENST00000353414 ANAPC1Q9H1A4 1944 aa7.91□□□□□ -1.14
COL11A1-201ENST00000353414 IGHV7-4-1A0A0J9YVY3 117 aa7.9□□□□□ -1.14
COL11A1-201ENST00000353414 NMSQ5H8A3 153 aa7.9□□□□□ -1.14
COL11A1-201ENST00000353414 IGKV2-24A0A0C4DH68 120 aa7.9□□□□□ -1.14
COL11A1-201ENST00000353414 SPTSSBQ8NFR3 76 aa7.9□□□□□ -1.14
COL11A1-201ENST00000353414 Q6ZR03 302 aa7.9□□□□□ -1.14
COL11A1-201ENST00000353414 ZC2HC1AQ96GY0 325 aa7.9□□□□□ -1.14
COL11A1-201ENST00000353414 POLR3KQ9Y2Y1 108 aaPredicted RBP7.9□□□□□ -1.14
COL11A1-201ENST00000353414 IGLV3-9A0A075B6K5 115 aa7.9□□□□□ -1.15
COL11A1-201ENST00000353414 IGKV3D-7A0A0C4DH55 119 aa7.9□□□□□ -1.15
COL11A1-201ENST00000353414 COLCA2A8K830 154 aa7.9□□□□□ -1.15
COL11A1-201ENST00000353414 TMEM141Q96I45 108 aa7.9□□□□□ -1.15
COL11A1-201ENST00000353414 MRPL53Q96EL3 112 aaKnown RBP7.9□□□□□ -1.15
COL11A1-201ENST00000353414 BLCAPP62952 87 aa7.89□□□□□ -1.15
COL11A1-201ENST00000353414 TMEM14BQ9NUH8 114 aa7.89□□□□□ -1.15
COL11A1-201ENST00000353414 ZNF106Q9H2Y7 1883 aaKnown RBP7.89□□□□□ -1.15
COL11A1-201ENST00000353414 NDUFA4O00483 81 aa7.89□□□□□ -1.15
COL11A1-201ENST00000353414 PYY3Q5JQD4 70 aa7.89□□□□□ -1.15
COL11A1-201ENST00000353414 BRK1Q8WUW1 75 aa7.89□□□□□ -1.15
COL11A1-201ENST00000353414 RITA1Q96K30 269 aa7.89□□□□□ -1.15
COL11A1-201ENST00000353414 ETDBQ3ZM63 59 aa7.89□□□□□ -1.15
COL11A1-201ENST00000353414 VPREB3Q9UKI3 123 aa7.89□□□□□ -1.15
COL11A1-201ENST00000353414 NCOA6Q14686 2063 aaPredicted RBP7.89□□□□□ -1.15
COL11A1-201ENST00000353414 A0A1B0GW64 132 aa7.89□□□□□ -1.15
COL11A1-201ENST00000353414 RHODO00212 210 aa7.89□□□□□ -1.15
COL11A1-201ENST00000353414 CYTL1Q9NRR1 136 aa7.89□□□□□ -1.15
COL11A1-201ENST00000353414 MED12LQ86YW9 2145 aa7.89□□□□□ -1.15
COL11A1-201ENST00000353414 DEFB1P60022 68 aa7.89□□□□□ -1.15
COL11A1-201ENST00000353414 TMEM14EPQ6UXP3 125 aa7.89□□□□□ -1.15
COL11A1-201ENST00000353414 M0R2N4 97 aa7.88□□□□□ -1.15
COL11A1-201ENST00000353414 ACYP1P07311 99 aa7.88□□□□□ -1.15
COL11A1-201ENST00000353414 Q9H8V8 135 aa7.88□□□□□ -1.15
COL11A1-201ENST00000353414 ICOSQ9Y6W8 199 aa7.88□□□□□ -1.15
COL11A1-201ENST00000353414 IGHV4-61A0A0C4DH41 118 aa7.88□□□□□ -1.15
COL11A1-201ENST00000353414 H0Y9J4 135 aa7.88□□□□□ -1.15
COL11A1-201ENST00000353414 J3QLI3 93 aa7.88□□□□□ -1.15
COL11A1-201ENST00000353414 RPL39LQ96EH5 51 aaKnown RBP7.88□□□□□ -1.15
COL11A1-201ENST00000353414 C9orf118A6NHY6 69 aa7.88□□□□□ -1.15
COL11A1-201ENST00000353414 GATA1P15976 413 aaPredicted RBP7.88□□□□□ -1.15
COL11A1-201ENST00000353414 CEND1Q8N111 149 aa7.88□□□□□ -1.15
COL11A1-201ENST00000353414 LYPD1Q8N2G4 141 aa7.88□□□□□ -1.15
COL11A1-201ENST00000353414 LYPD6BQ8NI32 183 aa7.88□□□□□ -1.15
COL11A1-201ENST00000353414 FAM110AQ9BQ89 295 aa7.88□□□□□ -1.15
COL11A1-201ENST00000353414 NDUFA4L2Q9NRX3 87 aa7.88□□□□□ -1.15
COL11A1-201ENST00000353414 ZNF833PQ6ZTB9 187 aa7.88□□□□□ -1.15
COL11A1-201ENST00000353414 DYNAPQ8N1N2 210 aa7.88□□□□□ -1.15
COL11A1-201ENST00000353414 KIAA1549Q9HCM3 1950 aa7.88□□□□□ -1.15
COL11A1-201ENST00000353414 MRPL35Q9NZE8 188 aaKnown RBP7.87□□□□□ -1.15
COL11A1-201ENST00000353414 TRBV19A0A075B6N1 114 aa7.87□□□□□ -1.15
COL11A1-201ENST00000353414 PRSS46E5RG02 174 aa7.87□□□□□ -1.15
COL11A1-201ENST00000353414 LOXP28300 417 aaPredicted RBP7.87□□□□□ -1.15
COL11A1-201ENST00000353414 RHOHQ15669 191 aa7.87□□□□□ -1.15
COL11A1-201ENST00000353414 DKK2Q9UBU2 259 aa7.87□□□□□ -1.15
COL11A1-201ENST00000353414 CTSGP08311 255 aa7.87□□□□□ -1.15
COL11A1-201ENST00000353414 Q8N8P6 123 aa7.87□□□□□ -1.15
COL11A1-201ENST00000353414 FAM104BQ5XKR9 115 aa7.87□□□□□ -1.15
COL11A1-201ENST00000353414 PPDPFLQ8WWR9 84 aa7.87□□□□□ -1.15
COL11A1-201ENST00000353414 SLAQ13239 276 aa7.86□□□□□ -1.15
COL11A1-201ENST00000353414 IGKV1-6A0A0C4DH72 117 aa7.86□□□□□ -1.15
COL11A1-201ENST00000353414 NPYP01303 97 aa7.86□□□□□ -1.15
COL11A1-201ENST00000353414 MRPL27Q9P0M9 148 aaKnown RBP7.86□□□□□ -1.15
COL11A1-201ENST00000353414 VOPP1Q96AW1 172 aa7.86□□□□□ -1.15
COL11A1-201ENST00000353414 SIGLEC8Q9NYZ4 499 aa7.86□□□□□ -1.15
COL11A1-201ENST00000353414 IGHV2-5P01817 119 aa7.86□□□□□ -1.15
COL11A1-201ENST00000353414 GPHB5Q86YW7 130 aa7.86□□□□□ -1.15
COL11A1-201ENST00000353414 MPLKIPQ8TAP9 179 aa7.86□□□□□ -1.15
COL11A1-201ENST00000353414 FBLN5Q9UBX5 448 aa7.86□□□□□ -1.15
COL11A1-201ENST00000353414 SPART-AS1P0CW21 52 aa7.86□□□□□ -1.15
COL11A1-201ENST00000353414 MPZP25189 248 aa7.86□□□□□ -1.15
COL11A1-201ENST00000353414 HERVK_113P63121 156 aa7.86□□□□□ -1.15
COL11A1-201ENST00000353414 HIGD2BQ4VC39 106 aa7.85□□□□□ -1.15
COL11A1-201ENST00000353414 UTF1Q5T230 341 aa7.85□□□□□ -1.15
COL11A1-201ENST00000353414 TRAV13-2A0A0B4J235 113 aa7.85□□□□□ -1.15
COL11A1-201ENST00000353414 Q6ZVH6 145 aa7.85□□□□□ -1.15
COL11A1-201ENST00000353414 PRR25Q96S07 402 aa7.85□□□□□ -1.15
COL11A1-201ENST00000353414 H3BRN7 92 aa7.85□□□□□ -1.15
COL11A1-201ENST00000353414 NDUFC2O95298 119 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms