RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 IGHV7-4-1A0A0J9YVY3 117 aa6.17□□□□□ -1.42
CD44-205ENST00000352818 GRIFINA4D1Z8 144 aa6.17□□□□□ -1.42
CD44-205ENST00000352818 SERF1AO75920 110 aa6.17□□□□□ -1.42
CD44-205ENST00000352818 HLA-DMBP28068 263 aa6.17□□□□□ -1.42
CD44-205ENST00000352818 CTRLP40313 264 aa6.17□□□□□ -1.42
CD44-205ENST00000352818 RIGQ13278 110 aa6.17□□□□□ -1.42
CD44-205ENST00000352818 LINC01559Q495D7 138 aa6.17□□□□□ -1.42
CD44-205ENST00000352818 FAM106AQ4KMX7 169 aa6.17□□□□□ -1.42
CD44-205ENST00000352818 BAGE3Q86Y29 109 aa6.17□□□□□ -1.42
CD44-205ENST00000352818 TMEM256Q8N2U0 113 aa6.17□□□□□ -1.42
CD44-205ENST00000352818 LINC00482Q8N8I6 264 aa6.17□□□□□ -1.42
CD44-205ENST00000352818 KCNS1Q96KK3 526 aa6.17□□□□□ -1.42
CD44-205ENST00000352818 PGLYRP4Q96LB8 373 aa6.17□□□□□ -1.42
CD44-205ENST00000352818 ALKBH7Q9BT30 221 aaPredicted RBP6.17□□□□□ -1.42
CD44-205ENST00000352818 UFC1Q9Y3C8 167 aa6.17□□□□□ -1.42
CD44-205ENST00000352818 IGHV3-66A0A0C4DH42 116 aa6.16□□□□□ -1.42
CD44-205ENST00000352818 TRBV7-9A0A0J9YWB2 115 aa6.16□□□□□ -1.42
CD44-205ENST00000352818 TMEM189A5PLL7 270 aa6.16□□□□□ -1.42
CD44-205ENST00000352818 ZNF705FA8MVS1 300 aaPredicted RBP6.16□□□□□ -1.42
CD44-205ENST00000352818 PRAC2D3DTV9 90 aa6.16□□□□□ -1.42
CD44-205ENST00000352818 LGALS9O00182 355 aa6.16□□□□□ -1.42
CD44-205ENST00000352818 OVOL1O14753 267 aa6.16□□□□□ -1.42
CD44-205ENST00000352818 ZNF207O43670 478 aaKnown RBP6.16□□□□□ -1.42
CD44-205ENST00000352818 IGHV3-11P01762 117 aa6.16□□□□□ -1.42
CD44-205ENST00000352818 LGALS1P09382 135 aaKnown RBP6.16□□□□□ -1.42
CD44-205ENST00000352818 ZNF138P52744 262 aa6.16□□□□□ -1.42
CD44-205ENST00000352818 HIST1H1AQ02539 215 aaPredicted RBP6.16□□□□□ -1.42
CD44-205ENST00000352818 TMEM95Q3KNT9 176 aa6.16□□□□□ -1.42
CD44-205ENST00000352818 ZNF493Q6ZR52 646 aa6.16□□□□□ -1.42
CD44-205ENST00000352818 RNF182Q8N6D2 247 aa6.16□□□□□ -1.42
CD44-205ENST00000352818 Q8TAT8 98 aa6.16□□□□□ -1.42
CD44-205ENST00000352818 C18orf32Q8TCD1 76 aa6.16□□□□□ -1.42
CD44-205ENST00000352818 BORCS7Q96B45 105 aa6.16□□□□□ -1.42
CD44-205ENST00000352818 C16orf92Q96LL3 132 aa6.16□□□□□ -1.42
CD44-205ENST00000352818 NRN1Q9NPD7 142 aa6.16□□□□□ -1.42
CD44-205ENST00000352818 SMPXQ9UHP9 88 aa6.16□□□□□ -1.42
CD44-205ENST00000352818 DNAH17Q9UFH2 4485 aa6.16□□□□□ -1.42
CD44-205ENST00000352818 FABP5P3A8MUU1 101 aa6.15□□□□□ -1.42
CD44-205ENST00000352818 NUPR1O60356 82 aa6.15□□□□□ -1.42
CD44-205ENST00000352818 IGLC6P0CF74 106 aa6.15□□□□□ -1.42
CD44-205ENST00000352818 GZMBP10144 247 aa6.15□□□□□ -1.42
CD44-205ENST00000352818 CAMPP49913 170 aa6.15□□□□□ -1.42
CD44-205ENST00000352818 KIAA1644Q3SXP7 199 aa6.15□□□□□ -1.42
CD44-205ENST00000352818 TMEM78Q5T7P6 136 aa6.15□□□□□ -1.42
CD44-205ENST00000352818 IGFL4Q6B9Z1 124 aa6.15□□□□□ -1.42
CD44-205ENST00000352818 LINC00476Q8WZB0 136 aa6.15□□□□□ -1.42
CD44-205ENST00000352818 UBE2E2Q96LR5 201 aa6.15□□□□□ -1.42
CD44-205ENST00000352818 CNFNQ9BYD5 112 aa6.15□□□□□ -1.42
CD44-205ENST00000352818 AGPAT4-IT1Q9H0P7 198 aa6.15□□□□□ -1.42
CD44-205ENST00000352818 GSN-AS1Q9NRJ2 163 aa6.15□□□□□ -1.42
CD44-205ENST00000352818 IGHV3OR16-13A0A075B7E8 117 aa6.14□□□□□ -1.43
CD44-205ENST00000352818 LOC102724200A0A096LPH7 203 aaPredicted RBP6.14□□□□□ -1.43
CD44-205ENST00000352818 IGHV3-49A0A0A0MS15 119 aa6.14□□□□□ -1.43
CD44-205ENST00000352818 IGHV3-74A0A0B4J1X5 117 aa6.14□□□□□ -1.43
CD44-205ENST00000352818 F2Z2F3 143 aa6.14□□□□□ -1.43
CD44-205ENST00000352818 ZNF324O75467 553 aaPredicted RBP6.14□□□□□ -1.43
CD44-205ENST00000352818 ARMS2P0C7Q2 107 aa6.14□□□□□ -1.43
CD44-205ENST00000352818 ZNF80P51504 273 aaPredicted RBP6.14□□□□□ -1.43
CD44-205ENST00000352818 ERCC8Q13216 396 aa6.14□□□□□ -1.43
CD44-205ENST00000352818 IQCJQ1A5X6 159 aa6.14□□□□□ -1.43
CD44-205ENST00000352818 LCNL1Q6ZST4 164 aa6.14□□□□□ -1.43
CD44-205ENST00000352818 FER1L6-AS1Q8NA97 138 aa6.14□□□□□ -1.43
CD44-205ENST00000352818 C20orf173Q96LM9 149 aa6.14□□□□□ -1.43
CD44-205ENST00000352818 LINC00477Q96M19 166 aa6.14□□□□□ -1.43
CD44-205ENST00000352818 SSBP4Q9BWG4 385 aaPredicted RBP6.14□□□□□ -1.43
CD44-205ENST00000352818 RHPN1-AS1Q9BWJ2 59 aa6.14□□□□□ -1.43
CD44-205ENST00000352818 DMBT1Q9UGM3 2413 aaPredicted RBP6.14□□□□□ -1.43
CD44-205ENST00000352818 DNAH6Q9C0G6 4158 aa6.14□□□□□ -1.43
CD44-205ENST00000352818 PF4P02776 101 aa6.13□□□□□ -1.43
CD44-205ENST00000352818 RPLP1P05386 114 aaKnown RBP6.13□□□□□ -1.43
CD44-205ENST00000352818 GPX1P07203 203 aa6.13□□□□□ -1.43
CD44-205ENST00000352818 MED14OSP0DP75 135 aa6.13□□□□□ -1.43
CD44-205ENST00000352818 TM4SF20Q53R12 229 aa6.13□□□□□ -1.43
CD44-205ENST00000352818 LYZL1Q6UWQ5 148 aa6.13□□□□□ -1.43
CD44-205ENST00000352818 Q6ZWC4 215 aa6.13□□□□□ -1.43
CD44-205ENST00000352818 APRG1Q8IVJ8 170 aa6.13□□□□□ -1.43
CD44-205ENST00000352818 ZNF738Q8NE65 137 aa6.13□□□□□ -1.43
CD44-205ENST00000352818 CHCHD1Q96BP2 118 aaKnown RBP6.13□□□□□ -1.43
CD44-205ENST00000352818 FAM19A4Q96LR4 140 aa6.13□□□□□ -1.43
CD44-205ENST00000352818 SAMD10Q9BYL1 202 aa6.13□□□□□ -1.43
CD44-205ENST00000352818 PKD1P98161 4303 aa6.12□□□□□ -1.43
CD44-205ENST00000352818 TMEM213A2RRL7 107 aa6.12□□□□□ -1.43
CD44-205ENST00000352818 PCP4L1A6NKN8 68 aa6.12□□□□□ -1.43
CD44-205ENST00000352818 RAB4AP20338 218 aa6.12□□□□□ -1.43
CD44-205ENST00000352818 PMCHP20382 165 aa6.12□□□□□ -1.43
CD44-205ENST00000352818 ID1P41134 155 aa6.12□□□□□ -1.43
CD44-205ENST00000352818 AMTP48728 403 aa6.12□□□□□ -1.43
CD44-205ENST00000352818 PKIAP61925 76 aa6.12□□□□□ -1.43
CD44-205ENST00000352818 CDPF1Q6NVV7 123 aa6.12□□□□□ -1.43
CD44-205ENST00000352818 ZNF575Q86XF7 245 aa6.12□□□□□ -1.43
CD44-205ENST00000352818 OR10J6PQ8NGY7 276 aa6.12□□□□□ -1.43
CD44-205ENST00000352818 DCANP1Q8TF63 244 aa6.12□□□□□ -1.43
CD44-205ENST00000352818 DPF1Q92782 380 aa6.12□□□□□ -1.43
CD44-205ENST00000352818 ODF3Q96PU9 254 aa6.12□□□□□ -1.43
CD44-205ENST00000352818 KRTAP3-3Q9BYR6 98 aa6.12□□□□□ -1.43
CD44-205ENST00000352818 KRTAP3-2Q9BYR7 98 aa6.12□□□□□ -1.43
CD44-205ENST00000352818 SNAI2O43623 268 aa6.11□□□□□ -1.43
CD44-205ENST00000352818 OR5AL1P0C617 328 aa6.11□□□□□ -1.43
CD44-205ENST00000352818 FAM104BQ5XKR9 115 aa6.11□□□□□ -1.43
CD44-205ENST00000352818 C10orf99Q6UWK7 81 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms