RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 IGHV3-16A0A0C4DH30 117 aa10.24□□□□□ -0.77
CASC4-202ENST00000345795 DEFB131AP59861 70 aa10.24□□□□□ -0.77
CASC4-202ENST00000345795 ID1P41134 155 aa10.24□□□□□ -0.77
CASC4-202ENST00000345795 ASIPP42127 132 aa10.24□□□□□ -0.77
CASC4-202ENST00000345795 SNRPD3P62318 126 aaKnown RBP10.24□□□□□ -0.77
CASC4-202ENST00000345795 C21orf62-AS1Q17RA5 79 aa10.24□□□□□ -0.77
CASC4-202ENST00000345795 ANXA2RQ3ZCQ2 193 aa10.24□□□□□ -0.77
CASC4-202ENST00000345795 C1orf194Q5T5A4 169 aa10.24□□□□□ -0.77
CASC4-202ENST00000345795 PRSS22Q9GZN4 317 aa10.24□□□□□ -0.77
CASC4-202ENST00000345795 MYOZ3Q8TDC0 251 aa10.23□□□□□ -0.77
CASC4-202ENST00000345795 MBD6Q96DN6 1003 aa10.23□□□□□ -0.77
CASC4-202ENST00000345795 MIEN1Q9BRT3 115 aa10.23□□□□□ -0.77
CASC4-202ENST00000345795 DAZ1Q9NQZ3 744 aaKnown RBP10.23□□□□□ -0.77
CASC4-202ENST00000345795 MXRA5Q9NR99 2828 aa10.23□□□□□ -0.77
CASC4-202ENST00000345795 SYS1-DBNDD2H3BUS1 97 aa10.23□□□□□ -0.77
CASC4-202ENST00000345795 H7C2G1 150 aa10.23□□□□□ -0.77
CASC4-202ENST00000345795 SLC25A34Q6PIV7 304 aa10.23□□□□□ -0.77
CASC4-202ENST00000345795 APRG1Q8IVJ8 170 aa10.23□□□□□ -0.77
CASC4-202ENST00000345795 SIGLEC8Q9NYZ4 499 aa10.23□□□□□ -0.77
CASC4-202ENST00000345795 LAMTOR2Q9Y2Q5 125 aa10.23□□□□□ -0.77
CASC4-202ENST00000345795 VPS13CQ709C8 3753 aa10.23□□□□□ -0.77
CASC4-202ENST00000345795 OR11H1Q8NG94 326 aa10.23□□□□□ -0.77
CASC4-202ENST00000345795 TMEM158Q8WZ71 300 aa10.23□□□□□ -0.77
CASC4-202ENST00000345795 SLC50A1Q9BRV3 221 aa10.23□□□□□ -0.77
CASC4-202ENST00000345795 SCGB1D4Q6XE38 83 aa10.22□□□□□ -0.77
CASC4-202ENST00000345795 Q0VG73 95 aa10.22□□□□□ -0.77
CASC4-202ENST00000345795 TRAV9-1A0A075B6T8 112 aa10.22□□□□□ -0.77
CASC4-202ENST00000345795 F8W735 103 aaPredicted RBP10.22□□□□□ -0.77
CASC4-202ENST00000345795 XCL2Q9UBD3 114 aa10.22□□□□□ -0.77
CASC4-202ENST00000345795 CFHR3Q02985 330 aa10.21□□□□□ -0.77
CASC4-202ENST00000345795 SRSF1Q07955 248 aaKnown RBP eCLIP10.21□□□□□ -0.77
CASC4-202ENST00000345795 TMEM14CQ9P0S9 112 aa10.21□□□□□ -0.77
CASC4-202ENST00000345795 WI2-2373I1.2A0A1W2PRP0 233 aa10.21□□□□□ -0.78
CASC4-202ENST00000345795 RNASE13Q5GAN3 156 aaKnown RBP10.21□□□□□ -0.78
CASC4-202ENST00000345795 OR4C5Q8NGB2 326 aa10.21□□□□□ -0.78
CASC4-202ENST00000345795 IFI27L1Q96BM0 104 aa10.21□□□□□ -0.78
CASC4-202ENST00000345795 TRAV9-2A0A087WT02 112 aa10.2□□□□□ -0.78
CASC4-202ENST00000345795 IGLV2-11P01706 119 aa10.2□□□□□ -0.78
CASC4-202ENST00000345795 TSPOP30536 169 aa10.2□□□□□ -0.78
CASC4-202ENST00000345795 FAM231DQ6ZW35 169 aa10.2□□□□□ -0.78
CASC4-202ENST00000345795 RPL39LQ96EH5 51 aaKnown RBP10.2□□□□□ -0.78
CASC4-202ENST00000345795 DKK2Q9UBU2 259 aa10.2□□□□□ -0.78
CASC4-202ENST00000345795 SETXQ7Z333 2677 aaKnown RBP10.2□□□□□ -0.78
CASC4-202ENST00000345795 NIPBLQ6KC79 2804 aaeCLIP10.2□□□□□ -0.787e-6■□□□□ 10.5
CASC4-202ENST00000345795 A0A0U1RRA0 63 aa10.2□□□□□ -0.78
CASC4-202ENST00000345795 TNFRSF6BO95407 300 aa10.2□□□□□ -0.78
CASC4-202ENST00000345795 TCTEX1D4Q5JR98 221 aa10.2□□□□□ -0.78
CASC4-202ENST00000345795 ZNF843Q8N446 348 aa10.2□□□□□ -0.78
CASC4-202ENST00000345795 SMR3AQ99954 134 aa10.2□□□□□ -0.78
CASC4-202ENST00000345795 NOTCH1P46531 2555 aa10.2□□□□□ -0.78
CASC4-202ENST00000345795 RPL35AP18077 110 aaKnown RBP10.2□□□□□ -0.78
CASC4-202ENST00000345795 COL5A1-AS1Q5SY13 56 aa10.2□□□□□ -0.78
CASC4-202ENST00000345795 FAM104BQ5XKR9 115 aa10.2□□□□□ -0.78
CASC4-202ENST00000345795 ATP5L2Q7Z4Y8 100 aa10.2□□□□□ -0.78
CASC4-202ENST00000345795 C20orf173Q96LM9 149 aa10.2□□□□□ -0.78
CASC4-202ENST00000345795 MLST8Q9BVC4 326 aa10.2□□□□□ -0.78
CASC4-202ENST00000345795 ZC2HC1BQ5TFG8 222 aa10.19□□□□□ -0.78
CASC4-202ENST00000345795 LINC01587Q99440 93 aa10.19□□□□□ -0.78
CASC4-202ENST00000345795 HBDP02042 147 aa10.19□□□□□ -0.78
CASC4-202ENST00000345795 PDE6HQ13956 83 aa10.19□□□□□ -0.78
CASC4-202ENST00000345795 HOXD3P31249 432 aaPredicted RBP10.18□□□□□ -0.78
CASC4-202ENST00000345795 TMEM170BQ5T4T1 132 aa10.18□□□□□ -0.78
CASC4-202ENST00000345795 PHLDA1Q8WV24 401 aaPredicted RBP10.18□□□□□ -0.78
CASC4-202ENST00000345795 SCGB3A1Q96QR1 104 aa10.18□□□□□ -0.78
CASC4-202ENST00000345795 IGHV4OR15-8A0A075B7B6 117 aa10.18□□□□□ -0.78
CASC4-202ENST00000345795 A0A087WW49 117 aa10.18□□□□□ -0.78
CASC4-202ENST00000345795 TRAV21A0A0B4J279 112 aa10.18□□□□□ -0.78
CASC4-202ENST00000345795 C19orf71A6NCJ1 209 aa10.18□□□□□ -0.78
CASC4-202ENST00000345795 FSTL3O95633 263 aa10.18□□□□□ -0.78
CASC4-202ENST00000345795 MUC4Q99102 2169 aa10.18□□□□□ -0.78
CASC4-202ENST00000345795 IGHV3-38A0A0C4DH36 116 aa10.18□□□□□ -0.78
CASC4-202ENST00000345795 PLP1P60201 277 aa10.18□□□□□ -0.78
CASC4-202ENST00000345795 CD300EQ496F6 205 aaPredicted RBP10.18□□□□□ -0.78
CASC4-202ENST00000345795 KLF12Q9Y4X4 402 aa10.18□□□□□ -0.78
CASC4-202ENST00000345795 COA6Q5JTJ3 125 aaKnown RBP10.17□□□□□ -0.78
CASC4-202ENST00000345795 LYPD1Q8N2G4 141 aa10.17□□□□□ -0.78
CASC4-202ENST00000345795 C11orf21Q9P2W6 132 aa10.17□□□□□ -0.78
CASC4-202ENST00000345795 APCP25054 2843 aa10.17□□□□□ -0.78
CASC4-202ENST00000345795 INS-IGF2F8WCM5 200 aa10.17□□□□□ -0.78
CASC4-202ENST00000345795 MYCNOSP40205 109 aa10.17□□□□□ -0.78
CASC4-202ENST00000345795 SRSF8Q9BRL6 282 aaKnown RBP10.17□□□□□ -0.78
CASC4-202ENST00000345795 RPS20P60866 119 aaKnown RBP10.17□□□□□ -0.78
CASC4-202ENST00000345795 SPATA12Q7Z6I5 190 aa10.17□□□□□ -0.78
CASC4-202ENST00000345795 MTURNQ8N3F0 131 aa10.17□□□□□ -0.78
CASC4-202ENST00000345795 PRR9Q5T870 116 aa10.16□□□□□ -0.78
CASC4-202ENST00000345795 OR2K2Q8NGT1 345 aa10.16□□□□□ -0.78
CASC4-202ENST00000345795 ZNF492Q9P255 531 aa10.16□□□□□ -0.78
CASC4-202ENST00000345795 M0QZK8 103 aa10.16□□□□□ -0.78
CASC4-202ENST00000345795 SAP30O75446 220 aa10.16□□□□□ -0.78
CASC4-202ENST00000345795 C9orf139Q6ZV77 190 aa10.16□□□□□ -0.78
CASC4-202ENST00000345795 IGLC3P0DOY3 106 aa10.16□□□□□ -0.78
CASC4-202ENST00000345795 SRSF9Q13242 221 aaKnown RBP eCLIP10.16□□□□□ -0.78
CASC4-202ENST00000345795 DGAT2L7PQ6IED9 249 aa10.16□□□□□ -0.78
CASC4-202ENST00000345795 LINC00469Q8N7U9 141 aa10.16□□□□□ -0.78
CASC4-202ENST00000345795 ZNF876PQ49A33 203 aa10.15□□□□□ -0.78
CASC4-202ENST00000345795 DNLZQ5SXM8 178 aa10.15□□□□□ -0.78
CASC4-202ENST00000345795 FAM223BA6NKX1 122 aa10.15□□□□□ -0.78
CASC4-202ENST00000345795 NDUFS8O00217 210 aa10.15□□□□□ -0.78
CASC4-202ENST00000345795 FAM223AQ8IWN6 122 aa10.15□□□□□ -0.78
CASC4-202ENST00000345795 ZFAND3Q9H8U3 227 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms