RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 TNFRSF18Q9Y5U5 241 aa7.03□□□□□ -1.28
ATG4A-202ENST00000345734 SELENOKQ9Y6D0 94 aa7.03□□□□□ -1.28
ATG4A-202ENST00000345734 HIGD1CA8MV81 97 aa7.02□□□□□ -1.29
ATG4A-202ENST00000345734 EDN2P20800 178 aa7.02□□□□□ -1.29
ATG4A-202ENST00000345734 CD300EQ496F6 205 aaPredicted RBP7.02□□□□□ -1.29
ATG4A-202ENST00000345734 GTSF1Q8WW33 167 aa7.02□□□□□ -1.29
ATG4A-202ENST00000345734 FAM30AQ9NZY2 134 aa7.02□□□□□ -1.29
ATG4A-202ENST00000345734 A0A1B0GUS0 222 aa7.01□□□□□ -1.29
ATG4A-202ENST00000345734 HINT1P49773 126 aaPredicted RBP7.01□□□□□ -1.29
ATG4A-202ENST00000345734 ERCC8Q13216 396 aa7.01□□□□□ -1.29
ATG4A-202ENST00000345734 TMEM136Q6ZRR5 245 aa7.01□□□□□ -1.29
ATG4A-202ENST00000345734 OR1N2Q8NGR9 330 aa7.01□□□□□ -1.29
ATG4A-202ENST00000345734 FOXC2Q99958 501 aa7.01□□□□□ -1.29
ATG4A-202ENST00000345734 NAT8BQ9UHF3 227 aa7.01□□□□□ -1.29
ATG4A-202ENST00000345734 AZU1P20160 251 aa7.01□□□□□ -1.29
ATG4A-202ENST00000345734 GDF5OSQ5U4N7 250 aa7.01□□□□□ -1.29
ATG4A-202ENST00000345734 GTF2H5Q6ZYL4 71 aa7.01□□□□□ -1.29
ATG4A-202ENST00000345734 SLC50A1Q9BRV3 221 aa7.01□□□□□ -1.29
ATG4A-202ENST00000345734 GNB1LQ9BYB4 327 aa7.01□□□□□ -1.29
ATG4A-202ENST00000345734 SETD2Q9BYW2 2564 aaPredicted RBP7□□□□□ -1.29
ATG4A-202ENST00000345734 TMEM89A2RUT3 159 aa7□□□□□ -1.29
ATG4A-202ENST00000345734 GRIFINA4D1Z8 144 aa7□□□□□ -1.29
ATG4A-202ENST00000345734 A8MWL6 223 aa7□□□□□ -1.29
ATG4A-202ENST00000345734 GCSHP23434 173 aa7□□□□□ -1.29
ATG4A-202ENST00000345734 NEGR1Q7Z3B1 354 aa7□□□□□ -1.29
ATG4A-202ENST00000345734 GPHB5Q86YW7 130 aa7□□□□□ -1.29
ATG4A-202ENST00000345734 DEFB125Q8N687 156 aa7□□□□□ -1.29
ATG4A-202ENST00000345734 PGLYRP4Q96LB8 373 aa7□□□□□ -1.29
ATG4A-202ENST00000345734 C20orf173Q96LM9 149 aa7□□□□□ -1.29
ATG4A-202ENST00000345734 PRR25Q96S07 402 aa7□□□□□ -1.29
ATG4A-202ENST00000345734 IGHV7-4-1A0A0J9YVY3 117 aa7□□□□□ -1.29
ATG4A-202ENST00000345734 TAX1BP3O14907 124 aa7□□□□□ -1.29
ATG4A-202ENST00000345734 FOXE3Q13461 319 aa7□□□□□ -1.29
ATG4A-202ENST00000345734 KIAA1644Q3SXP7 199 aa7□□□□□ -1.29
ATG4A-202ENST00000345734 RNF114Q9Y508 228 aa7□□□□□ -1.29
ATG4A-202ENST00000345734 CD5LO43866 347 aa6.99□□□□□ -1.29
ATG4A-202ENST00000345734 SH2D1AO60880 128 aa6.99□□□□□ -1.29
ATG4A-202ENST00000345734 SAP30O75446 220 aa6.99□□□□□ -1.29
ATG4A-202ENST00000345734 ELANEP08246 267 aa6.99□□□□□ -1.29
ATG4A-202ENST00000345734 ZNF80P51504 273 aaPredicted RBP6.99□□□□□ -1.29
ATG4A-202ENST00000345734 PMCHL1Q16048 86 aa6.99□□□□□ -1.29
ATG4A-202ENST00000345734 Q8N2B8 174 aa6.99□□□□□ -1.29
ATG4A-202ENST00000345734 MYOZ3Q8TDC0 251 aa6.99□□□□□ -1.29
ATG4A-202ENST00000345734 RHPN1-AS1Q9BWJ2 59 aa6.99□□□□□ -1.29
ATG4A-202ENST00000345734 DAZ1Q9NQZ3 744 aaKnown RBP6.99□□□□□ -1.29
ATG4A-202ENST00000345734 YAE1D1Q9NRH1 226 aa6.99□□□□□ -1.29
ATG4A-202ENST00000345734 OTOGQ6ZRI0 2925 aa6.99□□□□□ -1.29
ATG4A-202ENST00000345734 IGKV3-7A0A075B6H7 116 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 TRBV7-9A0A0J9YWB2 115 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 A0A1W2PS18 150 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 CT45A10P0DMU9 189 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 CAMPP49913 170 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 FAM106AQ4KMX7 169 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 TMEM256Q8N2U0 113 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 WIPF2Q8TF74 440 aaPredicted RBP6.98□□□□□ -1.29
ATG4A-202ENST00000345734 GFRA4Q9GZZ7 299 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 TMSB15BA0A087X1C1 80 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 LOC102724200A0A096LPH7 203 aaPredicted RBP6.98□□□□□ -1.29
ATG4A-202ENST00000345734 A0A1B0GXF2 115 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 DNAJC9-AS1A6NH13 148 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 F2Z2F3 143 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 SOCS3O14543 225 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 NUPR1O60356 82 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 MT-ND6P03923 174 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 SRD5A1P18405 259 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 DEFB1P60022 68 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 FAM162BQ5T6X4 162 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 HIST2H2BDQ6DRA6 164 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 UFSP1Q6NVU6 142 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 C12orf54Q6X4T0 127 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 RBPMS2Q6ZRY4 209 aaKnown RBP6.98□□□□□ -1.29
ATG4A-202ENST00000345734 C18orf65Q6ZTR6 163 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 Q6ZVH6 145 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 COX8CQ7Z4L0 72 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 MRPL53Q96EL3 112 aaKnown RBP6.98□□□□□ -1.29
ATG4A-202ENST00000345734 AGPAT4-IT1Q9H0P7 198 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 ESM1Q9NQ30 184 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 TP53TG3Q9ULZ0 132 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 SORL1Q92673 2214 aa6.98□□□□□ -1.29
ATG4A-202ENST00000345734 IGHV4OR15-8A0A075B7B6 117 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 A0A087WW49 117 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 RBAKDNA6NC62 111 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 FBLL1A6NHQ2 334 aaKnown RBP6.97□□□□□ -1.29
ATG4A-202ENST00000345734 HLA-DQA1P01909 254 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 APCSP02743 223 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 LGALS1P09382 135 aaKnown RBP6.97□□□□□ -1.29
ATG4A-202ENST00000345734 COX19Q49B96 90 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 AMMECR1LQ6DCA0 310 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 TMEM86BQ8N661 226 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 TEX29Q8N6K0 151 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 Q8N976 141 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 GEMIN7Q9H840 131 aaKnown RBP6.97□□□□□ -1.29
ATG4A-202ENST00000345734 TMEM213A2RRL7 107 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 FAM231BA6NCW3 169 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 J3QR89 54 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 K7EMT4 169 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 CRISP2P16562 243 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 HERV-K104P63124 156 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 RASL11AQ6T310 242 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 Q6ZSV7 163 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms