RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 Q6ZS92 163 aa13.76□□□□□ -0.21
SPAST-202ENST00000345662 THSD7BQ9C0I4 1608 aa13.75□□□□□ -0.21
SPAST-202ENST00000345662 CR1LQ2VPA4 569 aa13.75□□□□□ -0.21
SPAST-202ENST00000345662 C8orf31Q8N9H6 132 aa13.75□□□□□ -0.21
SPAST-202ENST00000345662 YPEL4Q96NS1 127 aa13.75□□□□□ -0.21
SPAST-202ENST00000345662 SYNJ2BPP57105 145 aa13.75□□□□□ -0.21
SPAST-202ENST00000345662 RHOHQ15669 191 aa13.75□□□□□ -0.21
SPAST-202ENST00000345662 ANAPC1Q9H1A4 1944 aa13.74□□□□□ -0.21
SPAST-202ENST00000345662 RNF138Q8WVD3 245 aa13.74□□□□□ -0.21
SPAST-202ENST00000345662 HERVK_113P63121 156 aa13.74□□□□□ -0.21
SPAST-202ENST00000345662 SPATA12Q7Z6I5 190 aa13.73□□□□□ -0.21
SPAST-202ENST00000345662 LENEPQ9Y5L5 61 aa13.73□□□□□ -0.21
SPAST-202ENST00000345662 IGHV3-16A0A0C4DH30 117 aa13.73□□□□□ -0.21
SPAST-202ENST00000345662 BAALC-AS2P0C853 105 aa13.73□□□□□ -0.21
SPAST-202ENST00000345662 FOXE3Q13461 319 aa13.73□□□□□ -0.21
SPAST-202ENST00000345662 MSRB1Q9NZV6 116 aa13.73□□□□□ -0.21
SPAST-202ENST00000345662 C11orf44Q8N8P7 122 aa13.73□□□□□ -0.21
SPAST-202ENST00000345662 ATP6V0E2Q8NHE4 81 aa13.73□□□□□ -0.21
SPAST-202ENST00000345662 MRPL53Q96EL3 112 aaKnown RBP13.73□□□□□ -0.21
SPAST-202ENST00000345662 RBMY1FQ15415 496 aaKnown RBP13.72□□□□□ -0.21
SPAST-202ENST00000345662 EML6Q6ZMW3 1958 aa13.72□□□□□ -0.21
SPAST-202ENST00000345662 A4D1N5 150 aa13.72□□□□□ -0.21
SPAST-202ENST00000345662 IGLV2-14P01704 120 aa13.72□□□□□ -0.21
SPAST-202ENST00000345662 LINC01620Q4KN68 170 aa13.72□□□□□ -0.21
SPAST-202ENST00000345662 TRAV12-2A0A075B6T6 113 aa13.72□□□□□ -0.21
SPAST-202ENST00000345662 IGHV3-38A0A0C4DH36 116 aa13.71□□□□□ -0.21
SPAST-202ENST00000345662 LY6G6EA0A0G2JKS1 128 aa13.71□□□□□ -0.22
SPAST-202ENST00000345662 KLHL30-AS1Q8NEE0 82 aa13.71□□□□□ -0.22
SPAST-202ENST00000345662 U3KQA8 63 aa13.71□□□□□ -0.22
SPAST-202ENST00000345662 TRAV12-1A0A0B4J245 112 aa13.71□□□□□ -0.22
SPAST-202ENST00000345662 TINCRA0A1B0GVN0 87 aa13.71□□□□□ -0.22
SPAST-202ENST00000345662 B4DSR2 109 aa13.7□□□□□ -0.22
SPAST-202ENST00000345662 C22orf46C9J442 243 aa13.7□□□□□ -0.22
SPAST-202ENST00000345662 ZNRF2Q8NHG8 242 aa13.7□□□□□ -0.22
SPAST-202ENST00000345662 KAAG1Q9UBP8 84 aa13.7□□□□□ -0.22
SPAST-202ENST00000345662 RS1O15537 224 aa13.7□□□□□ -0.22
SPAST-202ENST00000345662 RPL32P62910 135 aaKnown RBP13.7□□□□□ -0.22
SPAST-202ENST00000345662 PRSS47A8MTI9 375 aa13.7□□□□□ -0.22
SPAST-202ENST00000345662 RBX1P62877 108 aa13.7□□□□□ -0.22
SPAST-202ENST00000345662 BPESC1Q9GZL8 116 aa13.7□□□□□ -0.22
SPAST-202ENST00000345662 IGKV1OR2-108A0A075B7D4 117 aa13.69□□□□□ -0.22
SPAST-202ENST00000345662 GNRH2O43555 120 aa13.69□□□□□ -0.22
SPAST-202ENST00000345662 CRLF1O75462 422 aa13.69□□□□□ -0.22
SPAST-202ENST00000345662 RNASE13Q5GAN3 156 aaKnown RBP13.69□□□□□ -0.22
SPAST-202ENST00000345662 USF3Q68DE3 2245 aa13.69□□□□□ -0.22
SPAST-202ENST00000345662 ODF1Q14990 250 aa13.69□□□□□ -0.22
SPAST-202ENST00000345662 MUSTN1Q8IVN3 82 aa13.69□□□□□ -0.22
SPAST-202ENST00000345662 ODF3L1Q8IXM7 274 aa13.69□□□□□ -0.22
SPAST-202ENST00000345662 RIF1Q5UIP0 2472 aaKnown RBP13.69□□□□□ -0.22
SPAST-202ENST00000345662 IGKV1-17P01599 117 aa13.69□□□□□ -0.22
SPAST-202ENST00000345662 GPR179Q6PRD1 2367 aa13.68□□□□□ -0.22
SPAST-202ENST00000345662 RPL39LQ96EH5 51 aaKnown RBP13.68□□□□□ -0.22
SPAST-202ENST00000345662 TMEM243Q9BU79 118 aa13.68□□□□□ -0.22
SPAST-202ENST00000345662 RPL35AP18077 110 aaKnown RBP13.68□□□□□ -0.22
SPAST-202ENST00000345662 DSCR9P59020 149 aa13.68□□□□□ -0.22
SPAST-202ENST00000345662 FAM236AA0A1B0GUQ0 79 aa13.68□□□□□ -0.22
SPAST-202ENST00000345662 FAM236BA0A1B0GV22 79 aa13.68□□□□□ -0.22
SPAST-202ENST00000345662 I3L2K1 104 aa13.68□□□□□ -0.22
SPAST-202ENST00000345662 ICOSQ9Y6W8 199 aa13.67□□□□□ -0.22
SPAST-202ENST00000345662 E9PLD3 99 aa13.67□□□□□ -0.22
SPAST-202ENST00000345662 MRAPQ8TCY5 172 aa13.67□□□□□ -0.22
SPAST-202ENST00000345662 XCL2Q9UBD3 114 aa13.67□□□□□ -0.22
SPAST-202ENST00000345662 F8WEM9 126 aa13.67□□□□□ -0.22
SPAST-202ENST00000345662 A0A1B0GXF2 115 aa13.67□□□□□ -0.22
SPAST-202ENST00000345662 PLXNB3Q9ULL4 1909 aa13.66□□□□□ -0.22
SPAST-202ENST00000345662 C19orf71A6NCJ1 209 aa13.66□□□□□ -0.22
SPAST-202ENST00000345662 ATOX1O00244 68 aa13.66□□□□□ -0.22
SPAST-202ENST00000345662 DENND4CQ5VZ89 1909 aa13.66□□□□□ -0.22
SPAST-202ENST00000345662 RUSC1-AS1Q66K80 236 aa13.66□□□□□ -0.22
SPAST-202ENST00000345662 DSCR8Q96T75 97 aa13.66□□□□□ -0.22
SPAST-202ENST00000345662 Q9H8V8 135 aa13.66□□□□□ -0.22
SPAST-202ENST00000345662 J3KT08 172 aa13.66□□□□□ -0.22
SPAST-202ENST00000345662 CTRLP40313 264 aa13.66□□□□□ -0.22
SPAST-202ENST00000345662 RBM3P98179 157 aaKnown RBP13.66□□□□□ -0.22
SPAST-202ENST00000345662 ARHGAP21Q5T5U3 1957 aa13.65□□□□□ -0.22
SPAST-202ENST00000345662 K7EIM0 57 aa13.65□□□□□ -0.22
SPAST-202ENST00000345662 NXPH4O95158 308 aa13.65□□□□□ -0.22
SPAST-202ENST00000345662 TCTEX1D4Q5JR98 221 aa13.65□□□□□ -0.22
SPAST-202ENST00000345662 MALRD1Q5VYJ5 2156 aa13.65□□□□□ -0.22
SPAST-202ENST00000345662 IGHV7-4-1A0A0J9YVY3 117 aa13.65□□□□□ -0.22
SPAST-202ENST00000345662 LHBP01229 141 aa13.65□□□□□ -0.22
SPAST-202ENST00000345662 A0A0B4J2C4 111 aa13.65□□□□□ -0.23
SPAST-202ENST00000345662 ZFP2Q6ZN57 461 aa13.65□□□□□ -0.23
SPAST-202ENST00000345662 CITED2Q99967 270 aaPredicted RBP13.64□□□□□ -0.23
SPAST-202ENST00000345662 TMEM258P61165 79 aa13.64□□□□□ -0.23
SPAST-202ENST00000345662 NBASA2RRP1 2371 aa13.64□□□□□ -0.23
SPAST-202ENST00000345662 DEFB130BP0DP73 79 aa13.64□□□□□ -0.23
SPAST-202ENST00000345662 DEFB130AP0DP74 79 aa13.64□□□□□ -0.23
SPAST-202ENST00000345662 TRBV6-1A0A0K0K1D8 114 aa13.63□□□□□ -0.23
SPAST-202ENST00000345662 SPRY2O43597 315 aa13.63□□□□□ -0.23
SPAST-202ENST00000345662 F6UB75 175 aa13.63□□□□□ -0.23
SPAST-202ENST00000345662 TNRC6AQ8NDV7 1962 aaKnown RBP13.63□□□□□ -0.23
SPAST-202ENST00000345662 TANC1Q9C0D5 1861 aa13.63□□□□□ -0.23
SPAST-202ENST00000345662 TRBV10-2A0A0K0K1G8 114 aa13.63□□□□□ -0.23
SPAST-202ENST00000345662 IGLV2-8P01709 118 aa13.63□□□□□ -0.23
SPAST-202ENST00000345662 P0C879 139 aa13.63□□□□□ -0.23
SPAST-202ENST00000345662 PTH2Q96A98 100 aa13.62□□□□□ -0.23
SPAST-202ENST00000345662 A0A0J9YXV3 536 aa13.62□□□□□ -0.23
SPAST-202ENST00000345662 IGHV1-69P01742 117 aa13.62□□□□□ -0.23
SPAST-202ENST00000345662 BAALCQ8WXS3 180 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms