RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 WIPF2Q8TF74 440 aaPredicted RBP12.77□□□□□ -0.36
SMARCA4-201ENST00000344626 RMI2Q96E14 147 aa12.77□□□□□ -0.36
SMARCA4-201ENST00000344626 GGTLC3B5MD39 225 aa12.77□□□□□ -0.37
SMARCA4-201ENST00000344626 INS-IGF2F8WCM5 200 aa12.77□□□□□ -0.37
SMARCA4-201ENST00000344626 HELZ2Q9BYK8 2649 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-201ENST00000344626 EREGO14944 169 aa12.76□□□□□ -0.37
SMARCA4-201ENST00000344626 NDUFA11Q86Y39 141 aa12.76□□□□□ -0.37
SMARCA4-201ENST00000344626 AMN1Q8IY45 258 aa12.76□□□□□ -0.37
SMARCA4-201ENST00000344626 MAST4O15021 2626 aa12.75□□□□□ -0.37
SMARCA4-201ENST00000344626 IGHV3-16A0A0C4DH30 117 aa12.75□□□□□ -0.37
SMARCA4-201ENST00000344626 C2orf70A6NJV1 201 aa12.75□□□□□ -0.37
SMARCA4-201ENST00000344626 M0R2P5 195 aa12.75□□□□□ -0.37
SMARCA4-201ENST00000344626 C16orf54Q6UWD8 224 aa12.75□□□□□ -0.37
SMARCA4-201ENST00000344626 TEX22C9J3V5 150 aa12.75□□□□□ -0.37
SMARCA4-201ENST00000344626 SMIM13P0DJ93 91 aa12.75□□□□□ -0.37
SMARCA4-201ENST00000344626 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.75□□□□□ -0.37
SMARCA4-201ENST00000344626 CFHR4Q92496 578 aa12.75□□□□□ -0.37
SMARCA4-201ENST00000344626 PLXNB1O43157 2135 aa12.75□□□□□ -0.37
SMARCA4-201ENST00000344626 SLC25A20O43772 301 aa12.75□□□□□ -0.37
SMARCA4-201ENST00000344626 ARL6IP6Q8N6S5 226 aa12.75□□□□□ -0.37
SMARCA4-201ENST00000344626 Q6ZSV7 163 aa12.74□□□□□ -0.37
SMARCA4-201ENST00000344626 IL15RAQ13261 267 aa12.74□□□□□ -0.37
SMARCA4-201ENST00000344626 F6UB75 175 aa12.74□□□□□ -0.37
SMARCA4-201ENST00000344626 LINC00158P58513 81 aa12.74□□□□□ -0.37
SMARCA4-201ENST00000344626 FAM231DQ6ZW35 169 aa12.74□□□□□ -0.37
SMARCA4-201ENST00000344626 PLEKHB2Q96CS7 222 aa12.74□□□□□ -0.37
SMARCA4-201ENST00000344626 PLNP26678 52 aa12.74□□□□□ -0.37
SMARCA4-201ENST00000344626 I3L3M4 83 aa12.73□□□□□ -0.37
SMARCA4-201ENST00000344626 PAX4O43316 350 aa12.73□□□□□ -0.37
SMARCA4-201ENST00000344626 ZNF726P1Q15940 193 aa12.73□□□□□ -0.37
SMARCA4-201ENST00000344626 CD300EQ496F6 205 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-201ENST00000344626 C6orf226Q5I0X4 101 aa12.73□□□□□ -0.37
SMARCA4-201ENST00000344626 CBY1Q9Y3M2 126 aa12.73□□□□□ -0.37
SMARCA4-201ENST00000344626 IGKV1-17P01599 117 aa12.73□□□□□ -0.37
SMARCA4-201ENST00000344626 ARHGAP21Q5T5U3 1957 aa12.73□□□□□ -0.37
SMARCA4-201ENST00000344626 A0A096LPF7 62 aa12.72□□□□□ -0.37
SMARCA4-201ENST00000344626 TNFRSF6BO95407 300 aa12.72□□□□□ -0.37
SMARCA4-201ENST00000344626 ZNF493Q6ZR52 646 aa12.72□□□□□ -0.37
SMARCA4-201ENST00000344626 A0A1W2PPR1 153 aa12.72□□□□□ -0.37
SMARCA4-201ENST00000344626 ZNRF2Q8NHG8 242 aa12.72□□□□□ -0.37
SMARCA4-201ENST00000344626 CGB3P0DN86 165 aa12.71□□□□□ -0.37
SMARCA4-201ENST00000344626 CGB7P0DN87 165 aa12.71□□□□□ -0.37
SMARCA4-201ENST00000344626 LRP4O75096 1905 aa12.71□□□□□ -0.37
SMARCA4-201ENST00000344626 TRAV13-1A0A0B4J241 112 aa12.71□□□□□ -0.37
SMARCA4-201ENST00000344626 GAGE10A6NGK3 116 aa12.71□□□□□ -0.37
SMARCA4-201ENST00000344626 RHOHQ15669 191 aa12.71□□□□□ -0.37
SMARCA4-201ENST00000344626 TMEM243Q9BU79 118 aa12.71□□□□□ -0.37
SMARCA4-201ENST00000344626 DEFB135Q30KP9 77 aa12.71□□□□□ -0.37
SMARCA4-201ENST00000344626 C16orf74Q96GX8 76 aa12.71□□□□□ -0.37
SMARCA4-201ENST00000344626 AGPAT4-IT1Q9H0P7 198 aa12.71□□□□□ -0.38
SMARCA4-201ENST00000344626 MRPL16Q9NX20 251 aaKnown RBP12.71□□□□□ -0.38
SMARCA4-201ENST00000344626 KIAA1549Q9HCM3 1950 aa12.71□□□□□ -0.38
SMARCA4-201ENST00000344626 BUB3O43684 328 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 PLP1P60201 277 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 C11orf52Q96A22 123 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 HIST1H2BKO60814 126 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 HIST1H2BJP06899 126 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 CXCL1P09341 107 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 SPART-AS1P0CW21 52 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 HIST1H2BOP23527 126 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 HIST1H2BBP33778 126 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 HIST1H2BDP58876 126 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 HILS1P60008 231 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 HIST1H2BCP62807 126 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 HIST2H2BEQ16778 126 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 DYNAPQ8N1N2 210 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 HIST1H2BHQ93079 126 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 HIST1H2BNQ99877 126 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 HIST1H2BMQ99879 126 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 NOP10Q9NPE3 64 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 HIST2H2BDQ6DRA6 164 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 A0A0J9YY99 117 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 TMEM213A2RRL7 107 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 IGHG4P01861 327 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 FAM104BQ5XKR9 115 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 ZNF815PA8K554 130 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 SMKR1H3BMG3 65 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 IGF2BP2-AS1Q96M15 143 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 ZNF48Q96MX3 618 aaPredicted RBP12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 PSMG3-AS1Q96PY0 264 aa12.7□□□□□ -0.38
SMARCA4-201ENST00000344626 CRLF1O75462 422 aa12.69□□□□□ -0.38
SMARCA4-201ENST00000344626 DLX4Q92988 240 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-201ENST00000344626 MBD6Q96DN6 1003 aa12.69□□□□□ -0.38
SMARCA4-201ENST00000344626 C17orf77Q96MU5 243 aa12.69□□□□□ -0.38
SMARCA4-201ENST00000344626 WI2-2373I1.2A0A1W2PRP0 233 aa12.69□□□□□ -0.38
SMARCA4-201ENST00000344626 ZC2HC1AQ96GY0 325 aa12.69□□□□□ -0.38
SMARCA4-201ENST00000344626 C11orf68Q9H3H3 251 aaKnown RBP12.69□□□□□ -0.38
SMARCA4-201ENST00000344626 LINC01548A6NM66 108 aa12.69□□□□□ -0.38
SMARCA4-201ENST00000344626 S100A7L2Q5SY68 101 aa12.69□□□□□ -0.38
SMARCA4-201ENST00000344626 C14orf144Q96I85 54 aa12.69□□□□□ -0.38
SMARCA4-201ENST00000344626 MGAM2Q2M2H8 2515 aa12.68□□□□□ -0.38
SMARCA4-201ENST00000344626 NDUFS6O75380 124 aaKnown RBP12.68□□□□□ -0.38
SMARCA4-201ENST00000344626 IGLL1P15814 213 aa12.68□□□□□ -0.38
SMARCA4-201ENST00000344626 CYYR1Q96J86 154 aa12.68□□□□□ -0.38
SMARCA4-201ENST00000344626 C5orf30Q96GV9 206 aa12.68□□□□□ -0.38
SMARCA4-201ENST00000344626 GSN-AS1Q9NRJ2 163 aa12.68□□□□□ -0.38
SMARCA4-201ENST00000344626 LTAP01374 205 aa12.68□□□□□ -0.38
SMARCA4-201ENST00000344626 HLA-DMBP28068 263 aa12.68□□□□□ -0.38
SMARCA4-201ENST00000344626 ZNF561-AS1K7EIQ3 104 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms