RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 NUP35Q8NFH5 326 aa11.99□□□□□ -0.49
CEACAM1-202ENST00000344391 NAT8BQ9UHF3 227 aa11.99□□□□□ -0.49
CEACAM1-202ENST00000344391 HIGD1CA8MV81 97 aa11.98□□□□□ -0.49
CEACAM1-202ENST00000344391 AMBPP02760 352 aa11.98□□□□□ -0.49
CEACAM1-202ENST00000344391 EGFEM1PQ0D2K5 195 aa11.98□□□□□ -0.49
CEACAM1-202ENST00000344391 NUTF2P61970 127 aaKnown RBP11.97□□□□□ -0.49
CEACAM1-202ENST00000344391 ANXA2RQ3ZCQ2 193 aa11.97□□□□□ -0.49
CEACAM1-202ENST00000344391 MUC21Q5SSG8 566 aa11.97□□□□□ -0.49
CEACAM1-202ENST00000344391 NAGKQ9UJ70 344 aa11.97□□□□□ -0.49
CEACAM1-202ENST00000344391 GRIFINA4D1Z8 144 aa11.97□□□□□ -0.49
CEACAM1-202ENST00000344391 RBMY1A1P0DJD3 496 aaKnown RBP11.97□□□□□ -0.49
CEACAM1-202ENST00000344391 RBMY1CP0DJD4 496 aa11.97□□□□□ -0.49
CEACAM1-202ENST00000344391 RBMY1FQ15415 496 aaKnown RBP11.97□□□□□ -0.49
CEACAM1-202ENST00000344391 BTF3L4Q96K17 158 aa11.97□□□□□ -0.49
CEACAM1-202ENST00000344391 FAM210BQ96KR6 192 aa11.97□□□□□ -0.49
CEACAM1-202ENST00000344391 DNAH3Q8TD57 4116 aa11.96□□□□□ -0.49
CEACAM1-202ENST00000344391 IGLC6P0CF74 106 aa11.96□□□□□ -0.5
CEACAM1-202ENST00000344391 RPL35AP18077 110 aaKnown RBP11.96□□□□□ -0.5
CEACAM1-202ENST00000344391 KRTAP10-11P60412 298 aa11.96□□□□□ -0.5
CEACAM1-202ENST00000344391 TDRG1Q3Y452 100 aa11.96□□□□□ -0.5
CEACAM1-202ENST00000344391 FAM159AQ6UWV7 190 aa11.96□□□□□ -0.5
CEACAM1-202ENST00000344391 PGLYRP4Q96LB8 373 aa11.96□□□□□ -0.5
CEACAM1-202ENST00000344391 SRD5A3Q9H8P0 318 aa11.96□□□□□ -0.5
CEACAM1-202ENST00000344391 INSP01308 110 aa11.95□□□□□ -0.5
CEACAM1-202ENST00000344391 TYMSP04818 313 aa11.95□□□□□ -0.5
CEACAM1-202ENST00000344391 GIG44P09565 113 aaPredicted RBP11.95□□□□□ -0.5
CEACAM1-202ENST00000344391 RAB5AP20339 215 aa11.95□□□□□ -0.5
CEACAM1-202ENST00000344391 MORN3Q6PF18 240 aaPredicted RBP11.95□□□□□ -0.5
CEACAM1-202ENST00000344391 KCNS1Q96KK3 526 aa11.95□□□□□ -0.5
CEACAM1-202ENST00000344391 C20orf144Q9BQM9 153 aa11.95□□□□□ -0.5
CEACAM1-202ENST00000344391 XCL2Q9UBD3 114 aa11.95□□□□□ -0.5
CEACAM1-202ENST00000344391 ZMAT5Q9UDW3 170 aaKnown RBP11.95□□□□□ -0.5
CEACAM1-202ENST00000344391 IGHV1OR15-1A0A075B7D0 117 aa11.94□□□□□ -0.5
CEACAM1-202ENST00000344391 G3V4G9 280 aa11.94□□□□□ -0.5
CEACAM1-202ENST00000344391 SPINK4O60575 86 aa11.94□□□□□ -0.5
CEACAM1-202ENST00000344391 FER1L6-AS1Q8NA97 138 aa11.94□□□□□ -0.5
CEACAM1-202ENST00000344391 GNRH2O43555 120 aa11.93□□□□□ -0.5
CEACAM1-202ENST00000344391 DNLZQ5SXM8 178 aa11.93□□□□□ -0.5
CEACAM1-202ENST00000344391 SAMD5Q5TGI4 173 aa11.93□□□□□ -0.5
CEACAM1-202ENST00000344391 LYZL1Q6UWQ5 148 aa11.93□□□□□ -0.5
CEACAM1-202ENST00000344391 TPPP3Q9BW30 176 aa11.93□□□□□ -0.5
CEACAM1-202ENST00000344391 SSBP4Q9BWG4 385 aaPredicted RBP11.93□□□□□ -0.5
CEACAM1-202ENST00000344391 NBEAL1Q6ZS30 2694 aa11.92□□□□□ -0.5
CEACAM1-202ENST00000344391 FRMD6-AS1P0C7T7 363 aa11.92□□□□□ -0.5
CEACAM1-202ENST00000344391 CTRLP40313 264 aa11.92□□□□□ -0.5
CEACAM1-202ENST00000344391 MRPL54Q6P161 138 aaKnown RBP11.92□□□□□ -0.5
CEACAM1-202ENST00000344391 ATP5L2Q7Z4Y8 100 aa11.92□□□□□ -0.5
CEACAM1-202ENST00000344391 C1QTNF4Q9BXJ3 329 aa11.92□□□□□ -0.5
CEACAM1-202ENST00000344391 NOTCH1P46531 2555 aa11.92□□□□□ -0.5
CEACAM1-202ENST00000344391 A0A1B0GUT8 65 aa11.91□□□□□ -0.5
CEACAM1-202ENST00000344391 ARMS2P0C7Q2 107 aa11.91□□□□□ -0.5
CEACAM1-202ENST00000344391 ASIPP42127 132 aa11.91□□□□□ -0.5
CEACAM1-202ENST00000344391 C1orf158Q8N1D5 194 aa11.91□□□□□ -0.5
CEACAM1-202ENST00000344391 LINC00467Q9BRT7 94 aa11.91□□□□□ -0.5
CEACAM1-202ENST00000344391 CSTL1Q9H114 145 aa11.91□□□□□ -0.5
CEACAM1-202ENST00000344391 TP53TG3Q9ULZ0 132 aa11.91□□□□□ -0.5
CEACAM1-202ENST00000344391 MGAM2Q2M2H8 2515 aa11.91□□□□□ -0.5
CEACAM1-202ENST00000344391 LOC102724200A0A096LPH7 203 aaPredicted RBP11.9□□□□□ -0.5
CEACAM1-202ENST00000344391 A0A1B0GXF2 115 aa11.9□□□□□ -0.5
CEACAM1-202ENST00000344391 F2Z2F3 143 aa11.9□□□□□ -0.5
CEACAM1-202ENST00000344391 SNAI2O43623 268 aa11.9□□□□□ -0.5
CEACAM1-202ENST00000344391 OR5AL1P0C617 328 aa11.9□□□□□ -0.5
CEACAM1-202ENST00000344391 RPS10P46783 165 aaKnown RBP11.9□□□□□ -0.5
CEACAM1-202ENST00000344391 TMEM256Q8N2U0 113 aa11.9□□□□□ -0.5
CEACAM1-202ENST00000344391 CSNK1G2-AS1Q8NCQ2 148 aa11.9□□□□□ -0.5
CEACAM1-202ENST00000344391 LINC01587Q99440 93 aa11.9□□□□□ -0.5
CEACAM1-202ENST00000344391 CNFNQ9BYD5 112 aa11.9□□□□□ -0.5
CEACAM1-202ENST00000344391 H3BVH4 76 aa11.89□□□□□ -0.51
CEACAM1-202ENST00000344391 MED14OSP0DP75 135 aa11.89□□□□□ -0.51
CEACAM1-202ENST00000344391 RNASE3P12724 160 aaKnown RBP11.89□□□□□ -0.51
CEACAM1-202ENST00000344391 S100A4P26447 101 aaKnown RBP11.89□□□□□ -0.51
CEACAM1-202ENST00000344391 RASL11AQ6T310 242 aa11.89□□□□□ -0.51
CEACAM1-202ENST00000344391 IGHV3-16A0A0C4DH30 117 aa11.89□□□□□ -0.51
CEACAM1-202ENST00000344391 IGHV4-30-4P0DP06 118 aa11.89□□□□□ -0.51
CEACAM1-202ENST00000344391 RIGQ13278 110 aa11.89□□□□□ -0.51
CEACAM1-202ENST00000344391 BORCS7Q96B45 105 aa11.89□□□□□ -0.51
CEACAM1-202ENST00000344391 SCRT2Q9NQ03 307 aa11.89□□□□□ -0.51
CEACAM1-202ENST00000344391 TRGV11A0A075B6L2 103 aa11.88□□□□□ -0.51
CEACAM1-202ENST00000344391 MUC21A0A0G2JKD1 596 aa11.88□□□□□ -0.51
CEACAM1-202ENST00000344391 MUC21A0A140T8X8 626 aa11.88□□□□□ -0.51
CEACAM1-202ENST00000344391 CBY3A6NI87 242 aa11.88□□□□□ -0.51
CEACAM1-202ENST00000344391 CAMPP49913 170 aa11.88□□□□□ -0.51
CEACAM1-202ENST00000344391 HBBP68871 147 aa11.88□□□□□ -0.51
CEACAM1-202ENST00000344391 KRTAP21-3Q3LHN1 58 aa11.88□□□□□ -0.51
CEACAM1-202ENST00000344391 COX19Q49B96 90 aa11.88□□□□□ -0.51
CEACAM1-202ENST00000344391 WDR73Q6P4I2 378 aa11.88□□□□□ -0.51
CEACAM1-202ENST00000344391 TMEM208Q9BTX3 173 aa11.88□□□□□ -0.51
CEACAM1-202ENST00000344391 GNB1LQ9BYB4 327 aa11.88□□□□□ -0.51
CEACAM1-202ENST00000344391 MUC4Q99102 2169 aa11.88□□□□□ -0.51
CEACAM1-202ENST00000344391 KIR2DL5BA0A0G2JN68 375 aa11.87□□□□□ -0.51
CEACAM1-202ENST00000344391 KIR2DL5BA0A0G2JPC4 375 aa11.87□□□□□ -0.51
CEACAM1-202ENST00000344391 TMEM136Q6ZRR5 245 aa11.87□□□□□ -0.51
CEACAM1-202ENST00000344391 KIR2DL5AQ8N109 375 aa11.87□□□□□ -0.51
CEACAM1-202ENST00000344391 OR10AG1Q8NH19 301 aa11.87□□□□□ -0.51
CEACAM1-202ENST00000344391 KIR2DL5BQ8NHK3 375 aa11.87□□□□□ -0.51
CEACAM1-202ENST00000344391 MDFICQ9P1T7 246 aa11.87□□□□□ -0.51
CEACAM1-202ENST00000344391 GOLT1BQ9Y3E0 138 aa11.87□□□□□ -0.51
CEACAM1-202ENST00000344391 A0A1B0GW15 77 aa11.86□□□□□ -0.51
CEACAM1-202ENST00000344391 PRM2P04554 102 aa11.86□□□□□ -0.51
CEACAM1-202ENST00000344391 HTN1P15515 57 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms