RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 SCRT2Q9NQ03 307 aa9.72□□□□□ -0.85
LMX1A-202ENST00000342310 ZNF688P0C7X2 276 aa9.71□□□□□ -0.85
LMX1A-202ENST00000342310 COX8AP10176 69 aa9.71□□□□□ -0.85
LMX1A-202ENST00000342310 UNQ9165/PRO28630Q6UXU0 137 aa9.71□□□□□ -0.85
LMX1A-202ENST00000342310 MRPL52Q86TS9 123 aaKnown RBP9.71□□□□□ -0.85
LMX1A-202ENST00000342310 COL27A1Q8IZC6 1860 aaPredicted RBP9.71□□□□□ -0.85
LMX1A-202ENST00000342310 TRAV12-2A0A075B6T6 113 aa9.71□□□□□ -0.86
LMX1A-202ENST00000342310 TMEM8BA6NDV4 472 aa9.71□□□□□ -0.86
LMX1A-202ENST00000342310 MSRB2Q9Y3D2 182 aa9.71□□□□□ -0.86
LMX1A-202ENST00000342310 SMAD5-AS1Q9Y6J3 95 aa9.71□□□□□ -0.86
LMX1A-202ENST00000342310 BSNQ9UPA5 3926 aa9.71□□□□□ -0.86
LMX1A-202ENST00000342310 TRAV41A0A0B4J266 112 aa9.7□□□□□ -0.86
LMX1A-202ENST00000342310 C19orf84I3L1E1 186 aa9.7□□□□□ -0.86
LMX1A-202ENST00000342310 NPFFO15130 113 aa9.7□□□□□ -0.86
LMX1A-202ENST00000342310 ETDBQ3ZM63 59 aa9.7□□□□□ -0.86
LMX1A-202ENST00000342310 SH2D6Q7Z4S9 175 aa9.7□□□□□ -0.86
LMX1A-202ENST00000342310 FBN2P35556 2912 aa9.7□□□□□ -0.86
LMX1A-202ENST00000342310 GNRH2O43555 120 aa9.7□□□□□ -0.86
LMX1A-202ENST00000342310 CD300EQ496F6 205 aaPredicted RBP9.7□□□□□ -0.86
LMX1A-202ENST00000342310 MRPL35Q9NZE8 188 aaKnown RBP9.7□□□□□ -0.86
LMX1A-202ENST00000342310 CYSLTR1Q9Y271 337 aa9.7□□□□□ -0.86
LMX1A-202ENST00000342310 INS-IGF2F8WCM5 200 aa9.7□□□□□ -0.86
LMX1A-202ENST00000342310 CHD6Q8TD26 2715 aa9.69□□□□□ -0.86
LMX1A-202ENST00000342310 SCGB1C2P0DMR2 95 aa9.69□□□□□ -0.86
LMX1A-202ENST00000342310 IGHV4-38-2P0DP08 117 aa9.69□□□□□ -0.86
LMX1A-202ENST00000342310 Q6AWC8 147 aa9.69□□□□□ -0.86
LMX1A-202ENST00000342310 OR11H6Q8NGC7 330 aa9.69□□□□□ -0.86
LMX1A-202ENST00000342310 TRAV12-3A0A0B4J271 114 aa9.69□□□□□ -0.86
LMX1A-202ENST00000342310 SMAD7O15105 426 aaKnown RBP9.69□□□□□ -0.86
LMX1A-202ENST00000342310 SCGB3A1Q96QR1 104 aa9.69□□□□□ -0.86
LMX1A-202ENST00000342310 IGHV3OR16-12A0A075B7B8 117 aa9.69□□□□□ -0.86
LMX1A-202ENST00000342310 H3BMG7 143 aa9.69□□□□□ -0.86
LMX1A-202ENST00000342310 FXYD2P54710 66 aa9.69□□□□□ -0.86
LMX1A-202ENST00000342310 RPL39LQ96EH5 51 aaKnown RBP9.69□□□□□ -0.86
LMX1A-202ENST00000342310 M0R1W7 72 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 BUB3O43684 328 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 C8orf31Q8N9H6 132 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 TEX15Q9BXT5 2789 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 IGKV2D-26A0A0A0MRZ7 120 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 TEX48A0A1B0GUV7 120 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 A0A1B0GWB2 263 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 LY6LH3BQJ8 138 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 CD7P09564 240 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 LYPD1Q8N2G4 141 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 SVIPQ8NHG7 77 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 RNF5Q99942 180 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 JPT2Q9H910 190 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 C11orf21Q9P2W6 132 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 IGSF10Q6WRI0 2623 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 WI2-2373I1.2A0A1W2PRP0 233 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 SAMD13Q5VXD3 122 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 Q6ZS46 218 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 SMIM12Q96EX1 92 aa9.68□□□□□ -0.86
LMX1A-202ENST00000342310 COL25A1Q9BXS0 654 aaPredicted RBP9.68□□□□□ -0.86
LMX1A-202ENST00000342310 IGKCP01834 107 aa9.67□□□□□ -0.86
LMX1A-202ENST00000342310 EDN2P20800 178 aa9.67□□□□□ -0.86
LMX1A-202ENST00000342310 MS4A6AQ9H2W1 248 aa9.67□□□□□ -0.86
LMX1A-202ENST00000342310 F8W735 103 aaPredicted RBP9.67□□□□□ -0.86
LMX1A-202ENST00000342310 LINC01545Q5VT33 79 aa9.67□□□□□ -0.86
LMX1A-202ENST00000342310 CCL19Q99731 98 aa9.67□□□□□ -0.86
LMX1A-202ENST00000342310 HECTD1Q9ULT8 2610 aa9.67□□□□□ -0.86
LMX1A-202ENST00000342310 IGKV3D-20A0A0C4DH25 116 aa9.66□□□□□ -0.86
LMX1A-202ENST00000342310 IGHV4-61A0A0C4DH41 118 aa9.66□□□□□ -0.86
LMX1A-202ENST00000342310 NBL1P41271 181 aa9.66□□□□□ -0.86
LMX1A-202ENST00000342310 RPS20P60866 119 aaKnown RBP9.66□□□□□ -0.86
LMX1A-202ENST00000342310 PDE6HQ13956 83 aa9.66□□□□□ -0.86
LMX1A-202ENST00000342310 TMEM170BQ5T4T1 132 aa9.66□□□□□ -0.86
LMX1A-202ENST00000342310 ADAMTSL5Q6ZMM2 481 aa9.66□□□□□ -0.86
LMX1A-202ENST00000342310 TTC9CQ8N5M4 171 aa9.66□□□□□ -0.86
LMX1A-202ENST00000342310 CCDC140Q96MF4 163 aa9.66□□□□□ -0.86
LMX1A-202ENST00000342310 BEX4Q9NWD9 120 aaPredicted RBP9.66□□□□□ -0.86
LMX1A-202ENST00000342310 IGF2-ASQ6U949 168 aa9.66□□□□□ -0.86
LMX1A-202ENST00000342310 C10orf99Q6UWK7 81 aa9.66□□□□□ -0.86
LMX1A-202ENST00000342310 DUX3Q96PT4 197 aa9.66□□□□□ -0.86
LMX1A-202ENST00000342310 C9orf118A6NHY6 69 aa9.66□□□□□ -0.86
LMX1A-202ENST00000342310 SEC11AP67812 179 aa9.66□□□□□ -0.86
LMX1A-202ENST00000342310 HSD52Q0P140 79 aa9.66□□□□□ -0.86
LMX1A-202ENST00000342310 ZNF56Q15929 161 aa9.66□□□□□ -0.86
LMX1A-202ENST00000342310 OR4X2Q8NGF9 303 aa9.66□□□□□ -0.86
LMX1A-202ENST00000342310 CSTL1Q9H114 145 aa9.66□□□□□ -0.86
LMX1A-202ENST00000342310 CENPVL3A0A0U1RRI6 287 aa9.65□□□□□ -0.86
LMX1A-202ENST00000342310 PSMG4Q5JS54 123 aa9.65□□□□□ -0.86
LMX1A-202ENST00000342310 CHAC1Q9BUX1 264 aa9.65□□□□□ -0.86
LMX1A-202ENST00000342310 RHPN1-AS1Q9BWJ2 59 aa9.65□□□□□ -0.86
LMX1A-202ENST00000342310 TSSC4Q9Y5U2 329 aaPredicted RBP9.65□□□□□ -0.86
LMX1A-202ENST00000342310 TMEM238C9JI98 176 aa9.65□□□□□ -0.86
LMX1A-202ENST00000342310 NPIPB6E9PJ23 425 aa9.65□□□□□ -0.86
LMX1A-202ENST00000342310 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.65□□□□□ -0.86
LMX1A-202ENST00000342310 PAX2Q02962 417 aa9.65□□□□□ -0.86
LMX1A-202ENST00000342310 WFDC2Q14508 124 aa9.65□□□□□ -0.86
LMX1A-202ENST00000342310 ANXA2RQ3ZCQ2 193 aa9.65□□□□□ -0.86
LMX1A-202ENST00000342310 KLK9Q9UKQ9 250 aa9.65□□□□□ -0.86
LMX1A-202ENST00000342310 UBE2E1P51965 193 aa9.65□□□□□ -0.87
LMX1A-202ENST00000342310 FAM159AQ6UWV7 190 aa9.65□□□□□ -0.87
LMX1A-202ENST00000342310 C2orf91Q6ZV80 131 aa9.65□□□□□ -0.87
LMX1A-202ENST00000342310 NPBQ8NG41 125 aa9.65□□□□□ -0.87
LMX1A-202ENST00000342310 ZNF479Q96JC4 524 aa9.65□□□□□ -0.87
LMX1A-202ENST00000342310 KNCNA6PVL3 124 aa9.64□□□□□ -0.87
LMX1A-202ENST00000342310 OR11H12B2RN74 326 aa9.64□□□□□ -0.87
LMX1A-202ENST00000342310 DPM2O94777 84 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms