RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 SP5Q6BEB4 398 aaPredicted RBP9.36□□□□□ -0.91
CDH5-201ENST00000341529 ZNF292O60281 2723 aa9.35□□□□□ -0.91
CDH5-201ENST00000341529 PPP1R17O96001 155 aa9.35□□□□□ -0.91
CDH5-201ENST00000341529 EIF4EBP1Q13541 118 aaPredicted RBP9.35□□□□□ -0.91
CDH5-201ENST00000341529 ORMDL2Q53FV1 153 aa9.35□□□□□ -0.91
CDH5-201ENST00000341529 SMIM12Q96EX1 92 aa9.35□□□□□ -0.91
CDH5-201ENST00000341529 MS4A6AQ9H2W1 248 aa9.35□□□□□ -0.91
CDH5-201ENST00000341529 DPH3P1Q9H4G8 78 aa9.35□□□□□ -0.91
CDH5-201ENST00000341529 IGHV4-59P01825 116 aa9.35□□□□□ -0.91
CDH5-201ENST00000341529 SAMD5Q5TGI4 173 aa9.35□□□□□ -0.91
CDH5-201ENST00000341529 CFHR4Q92496 578 aa9.35□□□□□ -0.91
CDH5-201ENST00000341529 GFRA4Q9GZZ7 299 aa9.35□□□□□ -0.91
CDH5-201ENST00000341529 CD28P10747 220 aa9.35□□□□□ -0.91
CDH5-201ENST00000341529 HSD52Q0P140 79 aa9.35□□□□□ -0.91
CDH5-201ENST00000341529 CT83Q5H943 113 aa9.35□□□□□ -0.91
CDH5-201ENST00000341529 MRPL35Q9NZE8 188 aaKnown RBP9.35□□□□□ -0.91
CDH5-201ENST00000341529 CR1LQ2VPA4 569 aa9.34□□□□□ -0.91
CDH5-201ENST00000341529 PCP2Q8IVA1 136 aa9.34□□□□□ -0.91
CDH5-201ENST00000341529 KLHL30-AS1Q8NEE0 82 aa9.34□□□□□ -0.91
CDH5-201ENST00000341529 TMEM14CQ9P0S9 112 aa9.34□□□□□ -0.91
CDH5-201ENST00000341529 XCL2Q9UBD3 114 aa9.34□□□□□ -0.91
CDH5-201ENST00000341529 COX11Q9Y6N1 276 aa9.34□□□□□ -0.91
CDH5-201ENST00000341529 PRSS46E5RG02 174 aa9.34□□□□□ -0.91
CDH5-201ENST00000341529 LURAP1LQ8IV03 231 aa9.34□□□□□ -0.91
CDH5-201ENST00000341529 STHQ8IWL8 128 aa9.34□□□□□ -0.91
CDH5-201ENST00000341529 IGHV4-30-2A0A087WSY4 118 aa9.34□□□□□ -0.91
CDH5-201ENST00000341529 RPL35AP18077 110 aaKnown RBP9.34□□□□□ -0.91
CDH5-201ENST00000341529 UBE2V1Q13404 147 aa9.34□□□□□ -0.91
CDH5-201ENST00000341529 CDSNQ15517 529 aa9.34□□□□□ -0.91
CDH5-201ENST00000341529 C1orf122Q6ZSJ8 110 aa9.34□□□□□ -0.91
CDH5-201ENST00000341529 ZNF625Q96I27 306 aaPredicted RBP9.34□□□□□ -0.91
CDH5-201ENST00000341529 SRSF8Q9BRL6 282 aaKnown RBP9.33□□□□□ -0.92
CDH5-201ENST00000341529 FAM231BA6NCW3 169 aa9.33□□□□□ -0.92
CDH5-201ENST00000341529 IGLV2-8P01709 118 aa9.33□□□□□ -0.92
CDH5-201ENST00000341529 GDF5OSQ5U4N7 250 aa9.33□□□□□ -0.92
CDH5-201ENST00000341529 OR13C6PQ8NH95 151 aa9.33□□□□□ -0.92
CDH5-201ENST00000341529 CENPVL3A0A0U1RRI6 287 aa9.33□□□□□ -0.92
CDH5-201ENST00000341529 H7C1H1 209 aa9.33□□□□□ -0.92
CDH5-201ENST00000341529 RNASE13Q5GAN3 156 aaKnown RBP9.33□□□□□ -0.92
CDH5-201ENST00000341529 Q8N9W7 124 aa9.33□□□□□ -0.92
CDH5-201ENST00000341529 K7ERJ3 54 aa9.33□□□□□ -0.92
CDH5-201ENST00000341529 IGHV4-39P01824 125 aa9.33□□□□□ -0.92
CDH5-201ENST00000341529 C2orf66Q6UXQ4 117 aa9.33□□□□□ -0.92
CDH5-201ENST00000341529 FANCD2OSQ96PS1 177 aa9.33□□□□□ -0.92
CDH5-201ENST00000341529 IGLV11-55A0A075B6I3 123 aa9.32□□□□□ -0.92
CDH5-201ENST00000341529 TRGV1A0A0A0MS02 117 aa9.32□□□□□ -0.92
CDH5-201ENST00000341529 HIST2H2BCQ6DN03 193 aa9.32□□□□□ -0.92
CDH5-201ENST00000341529 OR11H6Q8NGC7 330 aa9.32□□□□□ -0.92
CDH5-201ENST00000341529 IGHV3-38A0A0C4DH36 116 aa9.32□□□□□ -0.92
CDH5-201ENST00000341529 GAGE12BA1L429 117 aa9.32□□□□□ -0.92
CDH5-201ENST00000341529 COX6CP09669 75 aa9.32□□□□□ -0.92
CDH5-201ENST00000341529 CFHR3Q02985 330 aa9.32□□□□□ -0.92
CDH5-201ENST00000341529 SPXQ9BT56 116 aa9.32□□□□□ -0.92
CDH5-201ENST00000341529 ZNF747Q9BV97 191 aa9.32□□□□□ -0.92
CDH5-201ENST00000341529 TRBV12-3P01733 135 aa9.32□□□□□ -0.92
CDH5-201ENST00000341529 SEC11AP67812 179 aa9.32□□□□□ -0.92
CDH5-201ENST00000341529 CHAC1Q9BUX1 264 aa9.32□□□□□ -0.92
CDH5-201ENST00000341529 KIR2DL5BA0A0G2JN68 375 aa9.31□□□□□ -0.92
CDH5-201ENST00000341529 KIR2DL5BA0A0G2JPC4 375 aa9.31□□□□□ -0.92
CDH5-201ENST00000341529 LOXL1Q08397 574 aaPredicted RBP9.31□□□□□ -0.92
CDH5-201ENST00000341529 ANKRD39Q53RE8 183 aa9.31□□□□□ -0.92
CDH5-201ENST00000341529 KIR2DL5AQ8N109 375 aa9.31□□□□□ -0.92
CDH5-201ENST00000341529 YPEL4Q96NS1 127 aa9.31□□□□□ -0.92
CDH5-201ENST00000341529 MRPS16Q9Y3D3 137 aaKnown RBP9.31□□□□□ -0.92
CDH5-201ENST00000341529 HIST2H2BDQ6DRA6 164 aa9.31□□□□□ -0.92
CDH5-201ENST00000341529 USMG5Q96IX5 58 aa9.31□□□□□ -0.92
CDH5-201ENST00000341529 TP53TG1Q9Y2A0 90 aa9.31□□□□□ -0.92
CDH5-201ENST00000341529 C19orf84I3L1E1 186 aa9.31□□□□□ -0.92
CDH5-201ENST00000341529 SAP30O75446 220 aa9.31□□□□□ -0.92
CDH5-201ENST00000341529 PAPPA-AS1Q5QFB9 102 aa9.31□□□□□ -0.92
CDH5-201ENST00000341529 DEFB112Q30KQ8 113 aa9.3□□□□□ -0.92
CDH5-201ENST00000341529 C11orf68Q9H3H3 251 aaKnown RBP9.3□□□□□ -0.92
CDH5-201ENST00000341529 ATG2AQ2TAZ0 1938 aa9.3□□□□□ -0.92
CDH5-201ENST00000341529 SMAGPQ0VAQ4 97 aa9.3□□□□□ -0.92
CDH5-201ENST00000341529 OR9G4Q8NGQ1 327 aa9.3□□□□□ -0.92
CDH5-201ENST00000341529 C1orf159Q96HA4 380 aa9.3□□□□□ -0.92
CDH5-201ENST00000341529 A0A1B0GV72 72 aa9.3□□□□□ -0.92
CDH5-201ENST00000341529 FAM223BA6NKX1 122 aa9.3□□□□□ -0.92
CDH5-201ENST00000341529 HOXA3O43365 443 aaPredicted RBP9.3□□□□□ -0.92
CDH5-201ENST00000341529 AMTNQ6UX39 209 aa9.3□□□□□ -0.92
CDH5-201ENST00000341529 FAM223AQ8IWN6 122 aa9.3□□□□□ -0.92
CDH5-201ENST00000341529 DUSP14O95147 198 aaKnown RBP9.29□□□□□ -0.92
CDH5-201ENST00000341529 RNF114Q9Y508 228 aa9.29□□□□□ -0.92
CDH5-201ENST00000341529 TRAV13-1A0A0B4J241 112 aa9.29□□□□□ -0.92
CDH5-201ENST00000341529 SLC25A16P16260 332 aa9.29□□□□□ -0.92
CDH5-201ENST00000341529 TCTEX1D4Q5JR98 221 aa9.29□□□□□ -0.92
CDH5-201ENST00000341529 RPL39LQ96EH5 51 aaKnown RBP9.29□□□□□ -0.92
CDH5-201ENST00000341529 PEMTQ9UBM1 199 aa9.29□□□□□ -0.92
CDH5-201ENST00000341529 FRYQ5TBA9 3013 aa9.29□□□□□ -0.92
CDH5-201ENST00000341529 SDHAF1A6NFY7 115 aa9.29□□□□□ -0.92
CDH5-201ENST00000341529 ADARB2-AS1A8MUL3 147 aa9.29□□□□□ -0.92
CDH5-201ENST00000341529 BUB3O43684 328 aa9.29□□□□□ -0.92
CDH5-201ENST00000341529 TP53TG3Q9ULZ0 132 aa9.29□□□□□ -0.92
CDH5-201ENST00000341529 CIRBPQ14011 172 aaKnown RBP9.29□□□□□ -0.92
CDH5-201ENST00000341529 UNQ9165/PRO28630Q6UXU0 137 aa9.29□□□□□ -0.92
CDH5-201ENST00000341529 C8orf31Q8N9H6 132 aa9.29□□□□□ -0.92
CDH5-201ENST00000341529 ZNF80P51504 273 aaPredicted RBP9.28□□□□□ -0.92
CDH5-201ENST00000341529 Q5PR19 223 aa9.28□□□□□ -0.92
CDH5-201ENST00000341529 IGF2-ASQ6U949 168 aa9.28□□□□□ -0.92
CDH5-201ENST00000341529 PGPEP1Q9NXJ5 209 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms