RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 TRGV11A0A075B6L2 103 aa13.94□□□□□ -0.18
SYNE2-201ENST00000341472 TMEM183BQ1AE95 376 aa13.94□□□□□ -0.18
SYNE2-201ENST00000341472 TMEM183AQ8IXX5 376 aa13.94□□□□□ -0.18
SYNE2-201ENST00000341472 SPXQ9BT56 116 aa13.94□□□□□ -0.18
SYNE2-201ENST00000341472 UPK3BQ9BT76 320 aa13.94□□□□□ -0.18
SYNE2-201ENST00000341472 TREM1Q9NP99 234 aa13.94□□□□□ -0.18
SYNE2-201ENST00000341472 PRO0255Q9UI72 69 aa13.94□□□□□ -0.18
SYNE2-201ENST00000341472 NAGKQ9UJ70 344 aa13.94□□□□□ -0.18
SYNE2-201ENST00000341472 HHLA3Q9XRX5 114 aa13.94□□□□□ -0.18
SYNE2-201ENST00000341472 MRPS16Q9Y3D3 137 aaKnown RBP13.94□□□□□ -0.18
SYNE2-201ENST00000341472 NACAE9PAV3 2078 aa13.94□□□□□ -0.18
SYNE2-201ENST00000341472 CTXND1A0A1B0GTU2 59 aa13.93□□□□□ -0.18
SYNE2-201ENST00000341472 GCHFRP30047 84 aa13.93□□□□□ -0.18
SYNE2-201ENST00000341472 GNG5P63218 68 aa13.93□□□□□ -0.18
SYNE2-201ENST00000341472 FAM213BQ8TBF2 198 aa13.93□□□□□ -0.18
SYNE2-201ENST00000341472 TRAV8-1A0A0A6YYK1 113 aa13.92□□□□□ -0.18
SYNE2-201ENST00000341472 TRAV21A0A0B4J279 112 aa13.92□□□□□ -0.18
SYNE2-201ENST00000341472 BLOC1S1P78537 153 aa13.92□□□□□ -0.18
SYNE2-201ENST00000341472 TNP2Q05952 138 aa13.92□□□□□ -0.18
SYNE2-201ENST00000341472 FHL2Q14192 279 aa13.92□□□□□ -0.18
SYNE2-201ENST00000341472 TDRG1Q3Y452 100 aa13.92□□□□□ -0.18
SYNE2-201ENST00000341472 TTC32Q5I0X7 151 aa13.92□□□□□ -0.18
SYNE2-201ENST00000341472 SUN5Q8TC36 379 aa13.92□□□□□ -0.18
SYNE2-201ENST00000341472 TVP23CQ96ET8 276 aa13.92□□□□□ -0.18
SYNE2-201ENST00000341472 SERTM2A0A1B0GWG4 89 aa13.91□□□□□ -0.18
SYNE2-201ENST00000341472 TEX46H3BTG2 121 aa13.91□□□□□ -0.18
SYNE2-201ENST00000341472 GNRH2O43555 120 aa13.91□□□□□ -0.18
SYNE2-201ENST00000341472 MED14OSP0DP75 135 aa13.91□□□□□ -0.18
SYNE2-201ENST00000341472 CRYBA4P53673 196 aa13.91□□□□□ -0.18
SYNE2-201ENST00000341472 MBD3L1Q8WWY6 194 aa13.91□□□□□ -0.18
SYNE2-201ENST00000341472 RASL10AQ92737 203 aa13.91□□□□□ -0.18
SYNE2-201ENST00000341472 C8orf49Q96NF6 230 aa13.91□□□□□ -0.18
SYNE2-201ENST00000341472 TMEM167BQ9NRX6 74 aa13.91□□□□□ -0.18
SYNE2-201ENST00000341472 ICOSQ9Y6W8 199 aa13.91□□□□□ -0.18
SYNE2-201ENST00000341472 TRGV4A0A0C4DH28 118 aa13.9□□□□□ -0.18
SYNE2-201ENST00000341472 CXorf1O96002 111 aa13.9□□□□□ -0.18
SYNE2-201ENST00000341472 H2AFB1P0C5Y9 115 aa13.9□□□□□ -0.18
SYNE2-201ENST00000341472 C5orf17Q8NAS9 161 aa13.9□□□□□ -0.18
SYNE2-201ENST00000341472 SGK494Q96LW2 274 aa13.9□□□□□ -0.18
SYNE2-201ENST00000341472 NDFIP1Q9BT67 221 aa13.9□□□□□ -0.18
SYNE2-201ENST00000341472 A0A1W2PPQ1 181 aa13.89□□□□□ -0.19
SYNE2-201ENST00000341472 F6UZH7 168 aa13.89□□□□□ -0.19
SYNE2-201ENST00000341472 K7EQM0 130 aa13.89□□□□□ -0.19
SYNE2-201ENST00000341472 TCRAP04437 139 aa13.89□□□□□ -0.19
SYNE2-201ENST00000341472 FHITP49789 147 aa13.89□□□□□ -0.19
SYNE2-201ENST00000341472 SUMO1P63165 101 aaKnown RBP13.89□□□□□ -0.19
SYNE2-201ENST00000341472 IFITM2Q01629 132 aa13.89□□□□□ -0.19
SYNE2-201ENST00000341472 ZNF726P1Q15940 193 aa13.89□□□□□ -0.19
SYNE2-201ENST00000341472 MRPL23Q16540 153 aaKnown RBP13.89□□□□□ -0.19
SYNE2-201ENST00000341472 IQCF2Q8IXL9 164 aa13.89□□□□□ -0.19
SYNE2-201ENST00000341472 IGHV3-16A0A0C4DH30 117 aa13.88□□□□□ -0.19
SYNE2-201ENST00000341472 SFT2D1Q8WV19 159 aa13.88□□□□□ -0.19
SYNE2-201ENST00000341472 KCNS1Q96KK3 526 aa13.88□□□□□ -0.19
SYNE2-201ENST00000341472 EPDR1Q9UM22 224 aa13.88□□□□□ -0.19
SYNE2-201ENST00000341472 MUC4Q99102 2169 aa13.88□□□□□ -0.19
SYNE2-201ENST00000341472 TRAV1-1A0A0B4J248 108 aa13.87□□□□□ -0.19
SYNE2-201ENST00000341472 MAP1LC3B2A6NCE7 125 aa13.87□□□□□ -0.19
SYNE2-201ENST00000341472 M0R2P5 195 aa13.87□□□□□ -0.19
SYNE2-201ENST00000341472 SFTA3P0C7M3 94 aa13.87□□□□□ -0.19
SYNE2-201ENST00000341472 RAB14P61106 215 aa13.87□□□□□ -0.19
SYNE2-201ENST00000341472 ZNF479Q96JC4 524 aa13.87□□□□□ -0.19
SYNE2-201ENST00000341472 KRTAP1-5Q9BYS1 174 aa13.87□□□□□ -0.19
SYNE2-201ENST00000341472 MAP1LC3BQ9GZQ8 125 aa13.87□□□□□ -0.19
SYNE2-201ENST00000341472 SDF2L1Q9HCN8 221 aa13.87□□□□□ -0.19
SYNE2-201ENST00000341472 PSG8Q9UQ74 426 aa13.87□□□□□ -0.19
SYNE2-201ENST00000341472 LYPD5Q6UWN5 251 aa13.86□□□□□ -0.19
SYNE2-201ENST00000341472 TYMSP04818 313 aa13.85□□□□□ -0.19
SYNE2-201ENST00000341472 BTF3P20290 206 aaKnown RBP13.85□□□□□ -0.19
SYNE2-201ENST00000341472 NEGR1Q7Z3B1 354 aa13.85□□□□□ -0.19
SYNE2-201ENST00000341472 ZNF575Q86XF7 245 aa13.85□□□□□ -0.19
SYNE2-201ENST00000341472 OR4C5Q8NGB2 326 aa13.85□□□□□ -0.19
SYNE2-201ENST00000341472 TRAV4A0A0B4J268 109 aa13.84□□□□□ -0.19
SYNE2-201ENST00000341472 A0A1W2PRE2 83 aa13.84□□□□□ -0.19
SYNE2-201ENST00000341472 GGTLC3B5MD39 225 aa13.84□□□□□ -0.19
SYNE2-201ENST00000341472 SIVA1O15304 175 aa13.84□□□□□ -0.19
SYNE2-201ENST00000341472 NXPH4O95158 308 aa13.84□□□□□ -0.19
SYNE2-201ENST00000341472 FLI1Q01543 452 aaPredicted RBP13.84□□□□□ -0.19
SYNE2-201ENST00000341472 PRNTQ86SH4 94 aa13.84□□□□□ -0.19
SYNE2-201ENST00000341472 CYB561D1Q8N8Q1 229 aa13.84□□□□□ -0.19
SYNE2-201ENST00000341472 FBLL1A6NHQ2 334 aaKnown RBP13.83□□□□□ -0.2
SYNE2-201ENST00000341472 GCGP01275 180 aa13.83□□□□□ -0.2
SYNE2-201ENST00000341472 PPT1P50897 306 aa13.83□□□□□ -0.2
SYNE2-201ENST00000341472 ZNF80P51504 273 aaPredicted RBP13.83□□□□□ -0.2
SYNE2-201ENST00000341472 SMUG1Q53HV7 270 aa13.83□□□□□ -0.2
SYNE2-201ENST00000341472 SAPCD1Q5SSQ6 148 aa13.83□□□□□ -0.2
SYNE2-201ENST00000341472 PCNPQ8WW12 178 aaKnown RBP13.83□□□□□ -0.2
SYNE2-201ENST00000341472 IGLV2-11P01706 119 aa13.82□□□□□ -0.2
SYNE2-201ENST00000341472 ORM1P02763 201 aa13.82□□□□□ -0.2
SYNE2-201ENST00000341472 GYPEP15421 78 aa13.82□□□□□ -0.2
SYNE2-201ENST00000341472 SRIP30626 198 aa13.82□□□□□ -0.2
SYNE2-201ENST00000341472 FGF8P55075 233 aaPredicted RBP13.82□□□□□ -0.2
SYNE2-201ENST00000341472 LYPD6BQ8NI32 183 aa13.82□□□□□ -0.2
SYNE2-201ENST00000341472 C16orf90A8MZG2 172 aa13.81□□□□□ -0.2
SYNE2-201ENST00000341472 K7EQD1 137 aa13.81□□□□□ -0.2
SYNE2-201ENST00000341472 TMEM75Q8N9X5 138 aa13.81□□□□□ -0.2
SYNE2-201ENST00000341472 C11orf21Q9P2W6 132 aa13.81□□□□□ -0.2
SYNE2-201ENST00000341472 C9JCJ5 164 aa13.8□□□□□ -0.2
SYNE2-201ENST00000341472 PFN1P07737 140 aaKnown RBP13.8□□□□□ -0.2
SYNE2-201ENST00000341472 CLLU1Q5K131 121 aa13.8□□□□□ -0.2
SYNE2-201ENST00000341472 LINC00479Q96M42 142 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms