RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 CACNG7P62955 275 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 PRB3Q04118 309 aaPredicted RBP8.27□□□□□ -1.09
RTN3-201ENST00000338850 C15orf32Q32M92 178 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 MPV17L2Q567V2 206 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 UNQ5815/PRO19632Q6UWF5 114 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 C9orf139Q6ZV77 190 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 C2orf91Q6ZV80 131 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 AMN1Q8IY45 258 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 OR4X2Q8NGF9 303 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 IFI27L1Q96BM0 104 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 RNF185Q96GF1 192 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 JMJD8Q96S16 334 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 ZNF580Q9UK33 172 aa8.27□□□□□ -1.09
RTN3-201ENST00000338850 CLPSL1A2RUU4 121 aa8.26□□□□□ -1.09
RTN3-201ENST00000338850 K7EMI3 77 aa8.26□□□□□ -1.09
RTN3-201ENST00000338850 CCL25O15444 150 aa8.26□□□□□ -1.09
RTN3-201ENST00000338850 SNAI2O43623 268 aa8.26□□□□□ -1.09
RTN3-201ENST00000338850 NUDT3O95989 172 aa8.26□□□□□ -1.09
RTN3-201ENST00000338850 CSN3P07498 182 aa8.26□□□□□ -1.09
RTN3-201ENST00000338850 MED14OSP0DP75 135 aa8.26□□□□□ -1.09
RTN3-201ENST00000338850 FCER1GP30273 86 aa8.26□□□□□ -1.09
RTN3-201ENST00000338850 CKS2P33552 79 aa8.26□□□□□ -1.09
RTN3-201ENST00000338850 ZNF80P51504 273 aaPredicted RBP8.26□□□□□ -1.09
RTN3-201ENST00000338850 HSD52Q0P140 79 aa8.26□□□□□ -1.09
RTN3-201ENST00000338850 ZNF575Q86XF7 245 aa8.26□□□□□ -1.09
RTN3-201ENST00000338850 BCL6BQ8N143 479 aaPredicted RBP8.26□□□□□ -1.09
RTN3-201ENST00000338850 CCDC140Q96MF4 163 aa8.26□□□□□ -1.09
RTN3-201ENST00000338850 METTL26Q96S19 204 aa8.26□□□□□ -1.09
RTN3-201ENST00000338850 VGLL1Q99990 258 aa8.26□□□□□ -1.09
RTN3-201ENST00000338850 ZMAT4Q9H898 229 aa8.26□□□□□ -1.09
RTN3-201ENST00000338850 ESM1Q9NQ30 184 aa8.26□□□□□ -1.09
RTN3-201ENST00000338850 HIGD1BQ9P298 99 aa8.26□□□□□ -1.09
RTN3-201ENST00000338850 MGAM2Q2M2H8 2515 aa8.26□□□□□ -1.09
RTN3-201ENST00000338850 ARHGAP32A7KAX9 2087 aa8.25□□□□□ -1.09
RTN3-201ENST00000338850 ATP6V0E1O15342 81 aa8.25□□□□□ -1.09
RTN3-201ENST00000338850 NPYP01303 97 aa8.25□□□□□ -1.09
RTN3-201ENST00000338850 ZNF138P52744 262 aa8.25□□□□□ -1.09
RTN3-201ENST00000338850 C5orf56Q8N8D9 126 aa8.25□□□□□ -1.09
RTN3-201ENST00000338850 PEF1Q9UBV8 284 aaKnown RBP8.25□□□□□ -1.09
RTN3-201ENST00000338850 MOB4Q9Y3A3 225 aa8.25□□□□□ -1.09
RTN3-201ENST00000338850 NPFFO15130 113 aa8.24□□□□□ -1.09
RTN3-201ENST00000338850 ATP5LO75964 103 aa8.24□□□□□ -1.09
RTN3-201ENST00000338850 SAA4P35542 130 aa8.24□□□□□ -1.09
RTN3-201ENST00000338850 TWIST1Q15672 202 aa8.24□□□□□ -1.09
RTN3-201ENST00000338850 Q8N8P6 123 aa8.24□□□□□ -1.09
RTN3-201ENST00000338850 IGLV2-18A0A075B6J9 118 aa8.23□□□□□ -1.09
RTN3-201ENST00000338850 A6NDN8 102 aa8.23□□□□□ -1.09
RTN3-201ENST00000338850 H3BRM9 83 aa8.23□□□□□ -1.09
RTN3-201ENST00000338850 NCR2O95944 276 aa8.23□□□□□ -1.09
RTN3-201ENST00000338850 TMEM97Q5BJF2 176 aa8.23□□□□□ -1.09
RTN3-201ENST00000338850 TMEM78Q5T7P6 136 aa8.23□□□□□ -1.09
RTN3-201ENST00000338850 SAMD13Q5VXD3 122 aa8.23□□□□□ -1.09
RTN3-201ENST00000338850 SMIM15Q7Z3B0 74 aa8.23□□□□□ -1.09
RTN3-201ENST00000338850 APRG1Q8IVJ8 170 aa8.23□□□□□ -1.09
RTN3-201ENST00000338850 C3orf56Q8N813 242 aa8.23□□□□□ -1.09
RTN3-201ENST00000338850 GLMPQ8WWB7 406 aa8.23□□□□□ -1.09
RTN3-201ENST00000338850 MRAP2Q96G30 205 aa8.23□□□□□ -1.09
RTN3-201ENST00000338850 TPPP3Q9BW30 176 aa8.23□□□□□ -1.09
RTN3-201ENST00000338850 MEGF9Q9H1U4 602 aa8.23□□□□□ -1.09
RTN3-201ENST00000338850 S4R3C0 116 aa8.23□□□□□ -1.09
RTN3-201ENST00000338850 TRAV8-2A0A0B4J237 113 aa8.22□□□□□ -1.09
RTN3-201ENST00000338850 MUC21A0A0G2JKD1 596 aa8.22□□□□□ -1.09
RTN3-201ENST00000338850 IGHV7-4-1A0A0J9YVY3 117 aa8.22□□□□□ -1.09
RTN3-201ENST00000338850 MUC21A0A140T8X8 626 aa8.22□□□□□ -1.09
RTN3-201ENST00000338850 C7orf71A4D174 169 aa8.22□□□□□ -1.09
RTN3-201ENST00000338850 TNFRSF6BO95407 300 aa8.22□□□□□ -1.09
RTN3-201ENST00000338850 IGF1P05019 195 aa8.22□□□□□ -1.09
RTN3-201ENST00000338850 CLEC3BP05452 202 aa8.22□□□□□ -1.09
RTN3-201ENST00000338850 EVI2AP22794 236 aa8.22□□□□□ -1.09
RTN3-201ENST00000338850 ANKRD39Q53RE8 183 aa8.22□□□□□ -1.09
RTN3-201ENST00000338850 MUC21Q5SSG8 566 aa8.22□□□□□ -1.09
RTN3-201ENST00000338850 OR8A1Q8NGG7 326 aa8.22□□□□□ -1.09
RTN3-201ENST00000338850 Q8TAT8 98 aa8.22□□□□□ -1.09
RTN3-201ENST00000338850 LINC00477Q96M19 166 aa8.22□□□□□ -1.09
RTN3-201ENST00000338850 TMSB15BA0A087X1C1 80 aa8.21□□□□□ -1.1
RTN3-201ENST00000338850 IGKV3D-20A0A0C4DH25 116 aa8.21□□□□□ -1.1
RTN3-201ENST00000338850 LINC01549A6NIU2 74 aa8.21□□□□□ -1.1
RTN3-201ENST00000338850 LINC01619G3V211 115 aa8.21□□□□□ -1.1
RTN3-201ENST00000338850 M0R381 172 aa8.21□□□□□ -1.1
RTN3-201ENST00000338850 NDUFA4O00483 81 aa8.21□□□□□ -1.1
RTN3-201ENST00000338850 OVOL1O14753 267 aa8.21□□□□□ -1.1
RTN3-201ENST00000338850 ORM1P02763 201 aa8.21□□□□□ -1.1
RTN3-201ENST00000338850 ATP5G2Q06055 141 aa8.21□□□□□ -1.1
RTN3-201ENST00000338850 ODF1Q14990 250 aa8.21□□□□□ -1.1
RTN3-201ENST00000338850 ECSCRQ19T08 205 aa8.21□□□□□ -1.1
RTN3-201ENST00000338850 FAM106AQ4KMX7 169 aa8.21□□□□□ -1.1
RTN3-201ENST00000338850 ADAMTSL5Q6ZMM2 481 aa8.21□□□□□ -1.1
RTN3-201ENST00000338850 C8orf86Q6ZUL3 223 aa8.21□□□□□ -1.1
RTN3-201ENST00000338850 OR4C5Q8NGB2 326 aa8.21□□□□□ -1.1
RTN3-201ENST00000338850 USMG5Q96IX5 58 aa8.21□□□□□ -1.1
RTN3-201ENST00000338850 AGPAT4-IT1Q9H0P7 198 aa8.21□□□□□ -1.1
RTN3-201ENST00000338850 MEGF8Q7Z7M0 2845 aa8.2□□□□□ -1.1
RTN3-201ENST00000338850 TRAV41A0A0B4J266 112 aa8.2□□□□□ -1.1
RTN3-201ENST00000338850 DNAJC9-AS1A6NH13 148 aa8.2□□□□□ -1.1
RTN3-201ENST00000338850 CDKN1BP46527 198 aa8.2□□□□□ -1.1
RTN3-201ENST00000338850 RPL32P62910 135 aaKnown RBP8.2□□□□□ -1.1
RTN3-201ENST00000338850 VAMP3Q15836 100 aa8.2□□□□□ -1.1
RTN3-201ENST00000338850 DUX5Q96PT3 197 aa8.2□□□□□ -1.1
RTN3-201ENST00000338850 TRAV12-1A0A0B4J245 112 aa8.19□□□□□ -1.1
RTN3-201ENST00000338850 LOC389332A0A1B0GUA5 103 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms