RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 PQLC2Q6ZP29 291 aa9.08□□□□□ -0.96
NUDCD3-201ENST00000338427 OR4C5Q8NGB2 326 aa9.08□□□□□ -0.96
NUDCD3-201ENST00000338427 SH3BGRL3Q9H299 93 aa9.08□□□□□ -0.96
NUDCD3-201ENST00000338427 TRAV21A0A0B4J279 112 aa9.07□□□□□ -0.96
NUDCD3-201ENST00000338427 C9JCJ5 164 aa9.07□□□□□ -0.96
NUDCD3-201ENST00000338427 M0R2P5 195 aa9.07□□□□□ -0.96
NUDCD3-201ENST00000338427 STAG3L2P0CL84 134 aa9.07□□□□□ -0.96
NUDCD3-201ENST00000338427 STAG3L3P0CL85 134 aa9.07□□□□□ -0.96
NUDCD3-201ENST00000338427 GCHFRP30047 84 aa9.07□□□□□ -0.96
NUDCD3-201ENST00000338427 CDC34P49427 236 aaPredicted RBP9.07□□□□□ -0.96
NUDCD3-201ENST00000338427 SUMO1P63165 101 aaKnown RBP9.07□□□□□ -0.96
NUDCD3-201ENST00000338427 TDRG1Q3Y452 100 aa9.07□□□□□ -0.96
NUDCD3-201ENST00000338427 FAM74A1Q5RGS3 127 aa9.07□□□□□ -0.96
NUDCD3-201ENST00000338427 TMEM75Q8N9X5 138 aa9.07□□□□□ -0.96
NUDCD3-201ENST00000338427 TMED6Q8WW62 240 aa9.07□□□□□ -0.96
NUDCD3-201ENST00000338427 LINC00479Q96M42 142 aa9.07□□□□□ -0.96
NUDCD3-201ENST00000338427 MED28Q9H204 178 aa9.07□□□□□ -0.96
NUDCD3-201ENST00000338427 IGHV3-73A0A0B4J1V6 119 aa9.06□□□□□ -0.96
NUDCD3-201ENST00000338427 TRAV4A0A0B4J268 109 aa9.06□□□□□ -0.96
NUDCD3-201ENST00000338427 DNAH10OSP0CZ25 163 aa9.06□□□□□ -0.96
NUDCD3-201ENST00000338427 SRIP30626 198 aa9.06□□□□□ -0.96
NUDCD3-201ENST00000338427 SUN5Q8TC36 379 aa9.06□□□□□ -0.96
NUDCD3-201ENST00000338427 SCRT2Q9NQ03 307 aa9.06□□□□□ -0.96
NUDCD3-201ENST00000338427 PSG8Q9UQ74 426 aa9.06□□□□□ -0.96
NUDCD3-201ENST00000338427 FAT1Q14517 4588 aa9.06□□□□□ -0.96
NUDCD3-201ENST00000338427 IGLV2-11P01706 119 aa9.05□□□□□ -0.96
NUDCD3-201ENST00000338427 TCRAP04437 139 aa9.05□□□□□ -0.96
NUDCD3-201ENST00000338427 RPL7L1Q6DKI1 246 aaKnown RBP9.05□□□□□ -0.96
NUDCD3-201ENST00000338427 PRNTQ86SH4 94 aa9.05□□□□□ -0.96
NUDCD3-201ENST00000338427 OR2G3Q8NGZ4 309 aa9.05□□□□□ -0.96
NUDCD3-201ENST00000338427 AQP10Q96PS8 301 aa9.05□□□□□ -0.96
NUDCD3-201ENST00000338427 TRAV34A0A0B4J273 112 aa9.04□□□□□ -0.96
NUDCD3-201ENST00000338427 PGPEP1LA6NFU8 196 aa9.04□□□□□ -0.96
NUDCD3-201ENST00000338427 GCGP01275 180 aa9.04□□□□□ -0.96
NUDCD3-201ENST00000338427 ZNF726P1Q15940 193 aa9.04□□□□□ -0.96
NUDCD3-201ENST00000338427 Q8N1X5 172 aa9.04□□□□□ -0.96
NUDCD3-201ENST00000338427 ARL6IP6Q8N6S5 226 aa9.04□□□□□ -0.96
NUDCD3-201ENST00000338427 ASB13Q8WXK3 278 aa9.04□□□□□ -0.96
NUDCD3-201ENST00000338427 SDF2L1Q9HCN8 221 aa9.04□□□□□ -0.96
NUDCD3-201ENST00000338427 EPDR1Q9UM22 224 aa9.04□□□□□ -0.96
NUDCD3-201ENST00000338427 LY96Q9Y6Y9 160 aa9.04□□□□□ -0.96
NUDCD3-201ENST00000338427 GGTLC3B5MD39 225 aa9.03□□□□□ -0.96
NUDCD3-201ENST00000338427 GATA1P15976 413 aaPredicted RBP9.03□□□□□ -0.96
NUDCD3-201ENST00000338427 ZNF876PQ49A33 203 aa9.03□□□□□ -0.96
NUDCD3-201ENST00000338427 PCNPQ8WW12 178 aaKnown RBP9.03□□□□□ -0.96
NUDCD3-201ENST00000338427 PSMG3Q9BT73 122 aaPredicted RBP9.03□□□□□ -0.96
NUDCD3-201ENST00000338427 BATF3Q9NR55 127 aa9.03□□□□□ -0.96
NUDCD3-201ENST00000338427 A0A087WTM6 91 aa9.02□□□□□ -0.97
NUDCD3-201ENST00000338427 RS1O15537 224 aa9.02□□□□□ -0.97
NUDCD3-201ENST00000338427 ORM1P02763 201 aa9.02□□□□□ -0.97
NUDCD3-201ENST00000338427 FLI1Q01543 452 aaPredicted RBP9.02□□□□□ -0.97
NUDCD3-201ENST00000338427 CFAP126Q5VTH2 177 aa9.02□□□□□ -0.97
NUDCD3-201ENST00000338427 Q6ZSN1 163 aa9.02□□□□□ -0.97
NUDCD3-201ENST00000338427 SLC25A29Q8N8R3 303 aa9.02□□□□□ -0.97
NUDCD3-201ENST00000338427 C5orf17Q8NAS9 161 aa9.02□□□□□ -0.97
NUDCD3-201ENST00000338427 NHLRC2Q8NBF2 726 aa9.02□□□□□ -0.97
NUDCD3-201ENST00000338427 KCNS1Q96KK3 526 aa9.02□□□□□ -0.97
NUDCD3-201ENST00000338427 ACTR3CQ9C0K3 210 aaPredicted RBP9.02□□□□□ -0.97
NUDCD3-201ENST00000338427 MSRB1Q9NZV6 116 aa9.02□□□□□ -0.97
NUDCD3-201ENST00000338427 Q9UF83 564 aa9.02□□□□□ -0.97
NUDCD3-201ENST00000338427 DNAH8Q96JB1 4490 aa9.01□□□□□ -0.97
NUDCD3-201ENST00000338427 FXYD6-FXYD2A0A087WZ82 144 aa9.01□□□□□ -0.97
NUDCD3-201ENST00000338427 RNF222A6NCQ9 220 aa9.01□□□□□ -0.97
NUDCD3-201ENST00000338427 TAAR5O14804 337 aa9.01□□□□□ -0.97
NUDCD3-201ENST00000338427 FGF8P55075 233 aaPredicted RBP9.01□□□□□ -0.97
NUDCD3-201ENST00000338427 XGP55808 180 aa9.01□□□□□ -0.97
NUDCD3-201ENST00000338427 KRTAP10-1P60331 282 aa9.01□□□□□ -0.97
NUDCD3-201ENST00000338427 UBE2G2P60604 165 aa9.01□□□□□ -0.97
NUDCD3-201ENST00000338427 SERF2P84101 59 aa9.01□□□□□ -0.97
NUDCD3-201ENST00000338427 PGPEP1Q9NXJ5 209 aa9.01□□□□□ -0.97
NUDCD3-201ENST00000338427 TNFSF18Q9UNG2 199 aa9.01□□□□□ -0.97
NUDCD3-201ENST00000338427 TRAV9-2A0A087WT02 112 aa9□□□□□ -0.97
NUDCD3-201ENST00000338427 IGKV3D-20A0A0C4DH25 116 aa9□□□□□ -0.97
NUDCD3-201ENST00000338427 FBLL1A6NHQ2 334 aaKnown RBP9□□□□□ -0.97
NUDCD3-201ENST00000338427 PTTG1O95997 202 aa9□□□□□ -0.97
NUDCD3-201ENST00000338427 CXorf1O96002 111 aa9□□□□□ -0.97
NUDCD3-201ENST00000338427 CRYGDP07320 174 aa9□□□□□ -0.97
NUDCD3-201ENST00000338427 RNASE3P12724 160 aaKnown RBP9□□□□□ -0.97
NUDCD3-201ENST00000338427 EVI2AP22794 236 aa9□□□□□ -0.97
NUDCD3-201ENST00000338427 SMUG1Q53HV7 270 aa9□□□□□ -0.97
NUDCD3-201ENST00000338427 C9orf85Q96MD7 179 aa9□□□□□ -0.97
NUDCD3-201ENST00000338427 TXNDC17Q9BRA2 123 aa9□□□□□ -0.97
NUDCD3-201ENST00000338427 NDFIP1Q9BT67 221 aa9□□□□□ -0.97
NUDCD3-201ENST00000338427 JPT2Q9H910 190 aa9□□□□□ -0.97
NUDCD3-201ENST00000338427 G3V3Q6 166 aa8.99□□□□□ -0.97
NUDCD3-201ENST00000338427 IGHV3-30P01768 117 aa8.99□□□□□ -0.97
NUDCD3-201ENST00000338427 IGHV3-33P01772 117 aa8.99□□□□□ -0.97
NUDCD3-201ENST00000338427 MBP02144 154 aa8.99□□□□□ -0.97
NUDCD3-201ENST00000338427 GIPP09681 153 aaPredicted RBP8.99□□□□□ -0.97
NUDCD3-201ENST00000338427 IGHV3-30-3P0DP02 117 aa8.99□□□□□ -0.97
NUDCD3-201ENST00000338427 IGHV3-30-5P0DP03 117 aa8.99□□□□□ -0.97
NUDCD3-201ENST00000338427 CRIP1P50238 77 aa8.99□□□□□ -0.97
NUDCD3-201ENST00000338427 ERVFC1-1P60608 527 aa8.99□□□□□ -0.97
NUDCD3-201ENST00000338427 ZNF506Q5JVG8 444 aa8.99□□□□□ -0.97
NUDCD3-201ENST00000338427 TMEM167BQ9NRX6 74 aa8.99□□□□□ -0.97
NUDCD3-201ENST00000338427 SMLR1H3BR10 107 aa8.98□□□□□ -0.97
NUDCD3-201ENST00000338427 K7EQM0 130 aa8.98□□□□□ -0.97
NUDCD3-201ENST00000338427 EREGO14944 169 aa8.98□□□□□ -0.97
NUDCD3-201ENST00000338427 PFN1P07737 140 aaKnown RBP8.98□□□□□ -0.97
NUDCD3-201ENST00000338427 NFE4Q86UQ8 179 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms