RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 C20orf202A1L168 122 aa3.96□□□□□ -1.77
PRPF4B-201ENST00000337659 IGLV1-51P01701 117 aa3.96□□□□□ -1.77
PRPF4B-201ENST00000337659 FRMD6-AS1P0C7T7 363 aa3.96□□□□□ -1.77
PRPF4B-201ENST00000337659 DEFB114Q30KQ6 69 aa3.96□□□□□ -1.77
PRPF4B-201ENST00000337659 PYY3Q5JQD4 70 aa3.96□□□□□ -1.77
PRPF4B-201ENST00000337659 LINC01006Q8NI28 216 aa3.96□□□□□ -1.77
PRPF4B-201ENST00000337659 TMEM158Q8WZ71 300 aa3.96□□□□□ -1.77
PRPF4B-201ENST00000337659 RHPN1-AS1Q9BWJ2 59 aa3.96□□□□□ -1.77
PRPF4B-201ENST00000337659 MS4A6AQ9H2W1 248 aa3.96□□□□□ -1.77
PRPF4B-201ENST00000337659 TSSC4Q9Y5U2 329 aaPredicted RBP3.96□□□□□ -1.77
PRPF4B-201ENST00000337659 LINC01549A6NIU2 74 aa3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 CIDEAO60543 219 aa3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 HNF1AP20823 631 aa3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 HOXD3P31249 432 aaPredicted RBP3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 RAX2Q96IS3 184 aa3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 DPH3P1Q9H4G8 78 aa3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 TRAV34A0A0B4J273 112 aa3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 DUSP14O95147 198 aaKnown RBP3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 GZMBP10144 247 aa3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 RIGQ13278 110 aa3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 AP1S3Q96PC3 154 aa3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 PEMTQ9UBM1 199 aa3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 ZNF705GA8MUZ8 300 aaPredicted RBP3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 RPS10P46783 165 aaKnown RBP3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 PSMG4Q5JS54 123 aa3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 PRR31Q5SQ13 230 aa3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 TRPT1Q86TN4 253 aaKnown RBP3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 CSNK1G2-AS1Q8NCQ2 148 aa3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 WFDC9Q8NEX5 89 aa3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 COL12A1Q99715 3063 aa3.96□□□□□ -1.78
PRPF4B-201ENST00000337659 ARHGAP32A7KAX9 2087 aa3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 IGKV2-40A0A087WW87 121 aaPredicted RBP3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 M0R3E3 92 aa3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 NUPR1O60356 82 aa3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 IGKV2D-40P01614 121 aaPredicted RBP3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 APCSP02743 223 aa3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 KLHDC1Q8N7A1 406 aa3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 C11orf72Q8NBR9 251 aa3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 CMTM2Q8TAZ6 248 aa3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 BORCS7Q96B45 105 aa3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 C20orf78Q9BR46 151 aa3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 IGHV3-21A0A0B4J1V1 117 aa3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 TRAV21A0A0B4J279 112 aa3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 CSMD1Q96PZ7 3565 aa3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 IGHV3-16A0A0C4DH30 117 aa3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 RBMY1BA6NDE4 496 aaKnown RBP3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 RBMY1EA6NEQ0 496 aaKnown RBP3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 RBMY1DP0C7P1 496 aaKnown RBP3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 ID1P41134 155 aa3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 AMN1Q8IY45 258 aa3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 LINC00482Q8N8I6 264 aa3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 BLNKQ8WV28 456 aa3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 PPDPFQ9H3Y8 114 aa3.95□□□□□ -1.78
PRPF4B-201ENST00000337659 TRAV8-1A0A0A6YYK1 113 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 HLA-DMBP28068 263 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 Q6ZWC4 215 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 TSPOP30536 169 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 C10orf99Q6UWK7 81 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 H3BMM0 161 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 GIG44P09565 113 aaPredicted RBP3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 APELAP0DMC3 54 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 INSL3P51460 131 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 CRYBA4P53673 196 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 PRNTQ86SH4 94 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 RPH3ALQ9UNE2 315 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 C7orf71A4D174 169 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 TMEM189A5PLL7 270 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 SNURFLB1AK76 121 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 IGHV3-23P01764 117 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 ARMS2P0C7Q2 107 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 ZFP2Q6ZN57 461 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 TCF24Q7RTU0 167 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 FER1L6-AS1Q8NA97 138 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 OR1N2Q8NGR9 330 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 C14orf144Q96I85 54 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 OVOL2Q9BRP0 275 aa3.94□□□□□ -1.78
PRPF4B-201ENST00000337659 LINC01545Q5VT33 79 aa3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 GFI1BQ5VTD9 330 aa3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 TMEM256Q8N2U0 113 aa3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 TMEM18Q96B42 140 aa3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 TEP1Q99973 2627 aaKnown RBP3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 PLAC8L1A1L4L8 177 aa3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 ZNF705FA8MVS1 300 aaPredicted RBP3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 EDN2P20800 178 aa3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 LY6EQ16553 131 aa3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 LYZL1Q6UWQ5 148 aa3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 RCHY1Q96PM5 261 aa3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 MXRA5Q9NR99 2828 aa3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 IGHV3OR16-10A0A075B7F0 116 aa3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 OXTP01178 125 aa3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 RBMY1A1P0DJD3 496 aaKnown RBP3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 RBMY1CP0DJD4 496 aa3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 EGFEM1PQ0D2K5 195 aa3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 RBMY1FQ15415 496 aaKnown RBP3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 MRPL51Q4U2R6 128 aaKnown RBP3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 TMEM78Q5T7P6 136 aa3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 MS4A10Q96PG2 267 aa3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 MAP6D1Q9H9H5 199 aa3.93□□□□□ -1.78
PRPF4B-201ENST00000337659 TRAV12-1A0A0B4J245 112 aa3.92□□□□□ -1.78
PRPF4B-201ENST00000337659 DLEU1O43261 78 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms