RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SCRT2Q9NQ03 307 aa7.31□□□□□ -1.24
CAPN3-202ENST00000337571 MDFICQ9P1T7 246 aa7.31□□□□□ -1.24
CAPN3-202ENST00000337571 NAGKQ9UJ70 344 aa7.31□□□□□ -1.24
CAPN3-202ENST00000337571 HSPB11Q9Y547 144 aa7.31□□□□□ -1.24
CAPN3-202ENST00000337571 LY96Q9Y6Y9 160 aa7.31□□□□□ -1.24
CAPN3-202ENST00000337571 PGPA6NDG6 321 aa7.3□□□□□ -1.24
CAPN3-202ENST00000337571 K7EP13 123 aa7.3□□□□□ -1.24
CAPN3-202ENST00000337571 ORM1P02763 201 aa7.3□□□□□ -1.24
CAPN3-202ENST00000337571 EVI2AP22794 236 aa7.3□□□□□ -1.24
CAPN3-202ENST00000337571 KRTAP10-2P60368 255 aa7.3□□□□□ -1.24
CAPN3-202ENST00000337571 ERVFC1-1P60608 527 aa7.3□□□□□ -1.24
CAPN3-202ENST00000337571 ACOT6Q3I5F7 207 aaPredicted RBP7.3□□□□□ -1.24
CAPN3-202ENST00000337571 Q6AWC8 147 aa7.3□□□□□ -1.24
CAPN3-202ENST00000337571 TMED6Q8WW62 240 aa7.3□□□□□ -1.24
CAPN3-202ENST00000337571 RASL10AQ92737 203 aa7.3□□□□□ -1.24
CAPN3-202ENST00000337571 OTORQ9NRC9 128 aa7.3□□□□□ -1.24
CAPN3-202ENST00000337571 RPH3ALQ9UNE2 315 aa7.3□□□□□ -1.24
CAPN3-202ENST00000337571 ABCA13Q86UQ4 5058 aa7.29□□□□□ -1.24
CAPN3-202ENST00000337571 C9JCJ5 164 aa7.29□□□□□ -1.24
CAPN3-202ENST00000337571 C1QBP02746 253 aa7.29□□□□□ -1.24
CAPN3-202ENST00000337571 GYPEP15421 78 aa7.29□□□□□ -1.24
CAPN3-202ENST00000337571 Q8N1X5 172 aa7.29□□□□□ -1.24
CAPN3-202ENST00000337571 OR4C5Q8NGB2 326 aa7.29□□□□□ -1.24
CAPN3-202ENST00000337571 OR10G4Q8NGN3 311 aa7.29□□□□□ -1.24
CAPN3-202ENST00000337571 ZNF479Q96JC4 524 aa7.29□□□□□ -1.24
CAPN3-202ENST00000337571 TXNDC17Q9BRA2 123 aa7.29□□□□□ -1.24
CAPN3-202ENST00000337571 HSPG2P98160 4391 aa7.28□□□□□ -1.24
CAPN3-202ENST00000337571 TRAV21A0A0B4J279 112 aa7.28□□□□□ -1.24
CAPN3-202ENST00000337571 K7EQD1 137 aa7.28□□□□□ -1.24
CAPN3-202ENST00000337571 GIPP09681 153 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-202ENST00000337571 SFTA3P0C7M3 94 aa7.28□□□□□ -1.24
CAPN3-202ENST00000337571 PQLC2Q6ZP29 291 aa7.28□□□□□ -1.24
CAPN3-202ENST00000337571 SH2D6Q7Z4S9 175 aa7.28□□□□□ -1.24
CAPN3-202ENST00000337571 ARL6IP6Q8N6S5 226 aa7.28□□□□□ -1.24
CAPN3-202ENST00000337571 KCNS1Q96KK3 526 aa7.28□□□□□ -1.24
CAPN3-202ENST00000337571 TREM1Q9NP99 234 aa7.28□□□□□ -1.24
CAPN3-202ENST00000337571 TRAV4A0A0B4J268 109 aa7.27□□□□□ -1.25
CAPN3-202ENST00000337571 K7EQM0 130 aa7.27□□□□□ -1.25
CAPN3-202ENST00000337571 M0R2P5 195 aa7.27□□□□□ -1.25
CAPN3-202ENST00000337571 GNRH2O43555 120 aa7.27□□□□□ -1.25
CAPN3-202ENST00000337571 TDRG1Q3Y452 100 aa7.27□□□□□ -1.25
CAPN3-202ENST00000337571 Q6ZRN7 208 aaPredicted RBP7.27□□□□□ -1.25
CAPN3-202ENST00000337571 GOLT1AQ6ZVE7 132 aa7.27□□□□□ -1.25
CAPN3-202ENST00000337571 OR10G9Q8NGN4 311 aa7.27□□□□□ -1.25
CAPN3-202ENST00000337571 OR10G7Q8NGN6 311 aa7.27□□□□□ -1.25
CAPN3-202ENST00000337571 NDFIP1Q9BT67 221 aa7.27□□□□□ -1.25
CAPN3-202ENST00000337571 SDF2L1Q9HCN8 221 aa7.27□□□□□ -1.25
CAPN3-202ENST00000337571 TNFRSF18Q9Y5U5 241 aa7.27□□□□□ -1.25
CAPN3-202ENST00000337571 EIF3GO75821 320 aaKnown RBP eCLIP7.26□□□□□ -1.25
CAPN3-202ENST00000337571 IFITM2Q01629 132 aa7.26□□□□□ -1.25
CAPN3-202ENST00000337571 LGALSLQ3ZCW2 172 aaPredicted RBP7.26□□□□□ -1.25
CAPN3-202ENST00000337571 ZFP69Q49AA0 526 aa7.26□□□□□ -1.25
CAPN3-202ENST00000337571 C9orf62Q8N4C0 152 aa7.26□□□□□ -1.25
CAPN3-202ENST00000337571 NHLRC2Q8NBF2 726 aa7.26□□□□□ -1.25
CAPN3-202ENST00000337571 ASB13Q8WXK3 278 aa7.26□□□□□ -1.25
CAPN3-202ENST00000337571 MSRB1Q9NZV6 116 aa7.26□□□□□ -1.25
CAPN3-202ENST00000337571 IGHV3-16A0A0C4DH30 117 aa7.25□□□□□ -1.25
CAPN3-202ENST00000337571 SERTM2A0A1B0GWG4 89 aa7.25□□□□□ -1.25
CAPN3-202ENST00000337571 HMGB3O15347 200 aaKnown RBP7.25□□□□□ -1.25
CAPN3-202ENST00000337571 PPT1P50897 306 aa7.25□□□□□ -1.25
CAPN3-202ENST00000337571 WFDC10BQ8IUB3 73 aa7.25□□□□□ -1.25
CAPN3-202ENST00000337571 C10orf126Q8N4M7 172 aa7.25□□□□□ -1.25
CAPN3-202ENST00000337571 OR2T35Q8NGX2 323 aa7.25□□□□□ -1.25
CAPN3-202ENST00000337571 LRP1BQ9NZR2 4599 aa7.25□□□□□ -1.25
CAPN3-202ENST00000337571 A0A087WTM6 91 aa7.24□□□□□ -1.25
CAPN3-202ENST00000337571 TRAV8-1A0A0A6YYK1 113 aa7.24□□□□□ -1.25
CAPN3-202ENST00000337571 EPM2AB3EWF7 344 aa7.24□□□□□ -1.25
CAPN3-202ENST00000337571 F6UZH7 168 aa7.24□□□□□ -1.25
CAPN3-202ENST00000337571 TAAR5O14804 337 aa7.24□□□□□ -1.25
CAPN3-202ENST00000337571 PSCAO43653 123 aa7.24□□□□□ -1.25
CAPN3-202ENST00000337571 TYMSP04818 313 aa7.24□□□□□ -1.25
CAPN3-202ENST00000337571 CRYGDP07320 174 aa7.24□□□□□ -1.25
CAPN3-202ENST00000337571 PFN1P07737 140 aaKnown RBP7.24□□□□□ -1.25
CAPN3-202ENST00000337571 DNAH10OSP0CZ25 163 aa7.24□□□□□ -1.25
CAPN3-202ENST00000337571 RAB2AP61019 212 aa7.24□□□□□ -1.25
CAPN3-202ENST00000337571 ZNF876PQ49A33 203 aa7.24□□□□□ -1.25
CAPN3-202ENST00000337571 WFDC1Q9HC57 220 aa7.24□□□□□ -1.25
CAPN3-202ENST00000337571 TRAV8-6A0A0B4J262 113 aa7.23□□□□□ -1.25
CAPN3-202ENST00000337571 FBLL1A6NHQ2 334 aaKnown RBP7.23□□□□□ -1.25
CAPN3-202ENST00000337571 CIDEAO60543 219 aa7.23□□□□□ -1.25
CAPN3-202ENST00000337571 MBP02144 154 aa7.23□□□□□ -1.25
CAPN3-202ENST00000337571 ARL14EPLP0DKL9 152 aa7.23□□□□□ -1.25
CAPN3-202ENST00000337571 FUSP35637 526 aaKnown RBP eCLIP7.23□□□□□ -1.25
CAPN3-202ENST00000337571 CDC34P49427 236 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-202ENST00000337571 GNG5P63218 68 aa7.23□□□□□ -1.25
CAPN3-202ENST00000337571 SGK494Q96LW2 274 aa7.23□□□□□ -1.25
CAPN3-202ENST00000337571 PRADC1Q9BSG0 188 aa7.23□□□□□ -1.25
CAPN3-202ENST00000337571 IGHV3-38A0A0C4DH36 116 aa7.22□□□□□ -1.25
CAPN3-202ENST00000337571 C5orf17Q8NAS9 161 aa7.22□□□□□ -1.25
CAPN3-202ENST00000337571 HSD17B11Q8NBQ5 300 aa7.22□□□□□ -1.25
CAPN3-202ENST00000337571 TVP23CQ96ET8 276 aa7.22□□□□□ -1.25
CAPN3-202ENST00000337571 LOC100131303A0A0U1RQF7 123 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 RNF222A6NCQ9 220 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 HMSDA8MTL9 139 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 CXorf1O96002 111 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 GCGP01275 180 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 TCRAP04437 139 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 STAG3L2P0CL84 134 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 STAG3L3P0CL85 134 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 GATA1P15976 413 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms