RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ETDCA0A1B0GVM5 59 aa10.33□□□□□ -0.76
HLCS-201ENST00000336648 DKK2Q9UBU2 259 aa10.33□□□□□ -0.76
HLCS-201ENST00000336648 DOCK3Q8IZD9 2030 aa10.32□□□□□ -0.76
HLCS-201ENST00000336648 ICOSQ9Y6W8 199 aa10.32□□□□□ -0.76
HLCS-201ENST00000336648 FOXE3Q13461 319 aa10.32□□□□□ -0.76
HLCS-201ENST00000336648 WNK3Q9BYP7 1800 aa10.32□□□□□ -0.76
HLCS-201ENST00000336648 IGLV3-1P01715 115 aa10.32□□□□□ -0.76
HLCS-201ENST00000336648 ZNF747Q9BV97 191 aa10.32□□□□□ -0.76
HLCS-201ENST00000336648 FAM240AA0A1B0GVK7 77 aa10.31□□□□□ -0.76
HLCS-201ENST00000336648 K7ERS5 55 aa10.31□□□□□ -0.76
HLCS-201ENST00000336648 IGF2BP2-AS1Q96M15 143 aa10.31□□□□□ -0.76
HLCS-201ENST00000336648 Q8NFD4 153 aa10.31□□□□□ -0.76
HLCS-201ENST00000336648 TEN1Q86WV5 123 aa10.31□□□□□ -0.76
HLCS-201ENST00000336648 Q9H8V8 135 aa10.31□□□□□ -0.76
HLCS-201ENST00000336648 COX7B2Q8TF08 81 aa10.31□□□□□ -0.76
HLCS-201ENST00000336648 PROK2Q9HC23 129 aa10.31□□□□□ -0.76
HLCS-201ENST00000336648 SDK2Q58EX2 2172 aa10.3□□□□□ -0.76
HLCS-201ENST00000336648 ARHGEF17Q96PE2 2063 aaPredicted RBP10.3□□□□□ -0.76
HLCS-201ENST00000336648 TET1Q8NFU7 2136 aa10.3□□□□□ -0.76
HLCS-201ENST00000336648 VPREB3Q9UKI3 123 aa10.3□□□□□ -0.76
HLCS-201ENST00000336648 CRYGBP07316 175 aa10.3□□□□□ -0.76
HLCS-201ENST00000336648 LYPD6BQ8NI32 183 aa10.29□□□□□ -0.76
HLCS-201ENST00000336648 ZDBF2Q9HCK1 2354 aa10.29□□□□□ -0.76
HLCS-201ENST00000336648 JMJD7-PLA2G4BH0Y9G9 81 aa10.28□□□□□ -0.76
HLCS-201ENST00000336648 TPSG1Q9NRR2 321 aa10.28□□□□□ -0.76
HLCS-201ENST00000336648 IGHV4-4A0A075B6R2 117 aa10.28□□□□□ -0.76
HLCS-201ENST00000336648 OPRPNQ99935 248 aaPredicted RBP10.28□□□□□ -0.76
HLCS-201ENST00000336648 AGPAT4-IT1Q9H0P7 198 aa10.28□□□□□ -0.76
HLCS-201ENST00000336648 THADAQ6YHU6 1953 aa10.28□□□□□ -0.76
HLCS-201ENST00000336648 C16orf74Q96GX8 76 aa10.28□□□□□ -0.76
HLCS-201ENST00000336648 TRAV26-1A0A087WT03 109 aa10.28□□□□□ -0.76
HLCS-201ENST00000336648 TRAV4A0A0B4J268 109 aa10.28□□□□□ -0.76
HLCS-201ENST00000336648 LINC01620Q4KN68 170 aa10.28□□□□□ -0.76
HLCS-201ENST00000336648 FOXI1Q12951 378 aa10.27□□□□□ -0.77
HLCS-201ENST00000336648 DAZ2Q13117 558 aaKnown RBP10.27□□□□□ -0.77
HLCS-201ENST00000336648 RNASE13Q5GAN3 156 aaKnown RBP10.27□□□□□ -0.77
HLCS-201ENST00000336648 DAZ4Q86SG3 579 aaKnown RBP10.27□□□□□ -0.77
HLCS-201ENST00000336648 DAZ3Q9NR90 486 aaKnown RBP10.27□□□□□ -0.77
HLCS-201ENST00000336648 AKAP6Q13023 2319 aa10.27□□□□□ -0.77
HLCS-201ENST00000336648 COA6Q5JTJ3 125 aaKnown RBP10.27□□□□□ -0.77
HLCS-201ENST00000336648 KIR2DL5BA0A0G2JN68 375 aa10.27□□□□□ -0.77
HLCS-201ENST00000336648 KIR2DL5BA0A0G2JPC4 375 aa10.27□□□□□ -0.77
HLCS-201ENST00000336648 KIR2DL5AQ8N109 375 aa10.27□□□□□ -0.77
HLCS-201ENST00000336648 J3QKU1 62 aa10.26□□□□□ -0.77
HLCS-201ENST00000336648 ATP6V0E2Q8NHE4 81 aa10.26□□□□□ -0.77
HLCS-201ENST00000336648 IGKV2D-24A0A075B6R9 120 aa10.26□□□□□ -0.77
HLCS-201ENST00000336648 HOXB4P17483 251 aaPredicted RBP10.26□□□□□ -0.77
HLCS-201ENST00000336648 CLPSL2Q6UWE3 100 aa10.26□□□□□ -0.77
HLCS-201ENST00000336648 NPBQ8NG41 125 aa10.26□□□□□ -0.77
HLCS-201ENST00000336648 NDUFC2-KCTD14E9PQ53 114 aa10.26□□□□□ -0.77
HLCS-201ENST00000336648 PRR30Q53SZ7 412 aaPredicted RBP10.26□□□□□ -0.77
HLCS-201ENST00000336648 C9orf66Q5T8R8 295 aa10.26□□□□□ -0.77
HLCS-201ENST00000336648 MPLKIPQ8TAP9 179 aa10.26□□□□□ -0.77
HLCS-201ENST00000336648 XCL1P47992 114 aa10.26□□□□□ -0.77
HLCS-201ENST00000336648 A0A0U1RQV1 116 aa10.26□□□□□ -0.77
HLCS-201ENST00000336648 PCP2Q8IVA1 136 aa10.26□□□□□ -0.77
HLCS-201ENST00000336648 RPL18AQ02543 176 aaKnown RBP10.25□□□□□ -0.77
HLCS-201ENST00000336648 FAM120AOSQ5T036 256 aa10.25□□□□□ -0.77
HLCS-201ENST00000336648 TMEM61Q8N0U2 210 aa10.25□□□□□ -0.77
HLCS-201ENST00000336648 NOP10Q9NPE3 64 aaKnown RBP10.25□□□□□ -0.77
HLCS-201ENST00000336648 K7EN84 100 aa10.25□□□□□ -0.77
HLCS-201ENST00000336648 Q71RC1 249 aaPredicted RBP10.25□□□□□ -0.77
HLCS-201ENST00000336648 HIGD2BQ4VC39 106 aa10.24□□□□□ -0.77
HLCS-201ENST00000336648 BRWD3Q6RI45 1802 aa10.24□□□□□ -0.77
HLCS-201ENST00000336648 TRIOBPQ9H2D6 2365 aa10.24□□□□□ -0.77
HLCS-201ENST00000336648 CACNA1EQ15878 2313 aa10.24□□□□□ -0.77
HLCS-201ENST00000336648 MPDZO75970 2070 aa10.24□□□□□ -0.77
HLCS-201ENST00000336648 LY6G6EA0A0G2JKS1 128 aa10.24□□□□□ -0.77
HLCS-201ENST00000336648 SND1-IT1Q9HBX3 110 aa10.24□□□□□ -0.77
HLCS-201ENST00000336648 FAM215AQ9Y5M1 114 aa10.24□□□□□ -0.77
HLCS-201ENST00000336648 U3KQA8 63 aa10.24□□□□□ -0.77
HLCS-201ENST00000336648 TRBV10-2A0A0K0K1G8 114 aa10.24□□□□□ -0.77
HLCS-201ENST00000336648 TRBV12-3P01733 135 aa10.24□□□□□ -0.77
HLCS-201ENST00000336648 RSPO1Q2MKA7 263 aaPredicted RBP10.24□□□□□ -0.77
HLCS-201ENST00000336648 BUB3O43684 328 aa10.24□□□□□ -0.77
HLCS-201ENST00000336648 MED14OSP0DP75 135 aa10.24□□□□□ -0.77
HLCS-201ENST00000336648 FAM236DA0A1B0GTK5 79 aa10.24□□□□□ -0.77
HLCS-201ENST00000336648 G3V4G9 280 aa10.24□□□□□ -0.77
HLCS-201ENST00000336648 FAM236CP0DP71 79 aa10.24□□□□□ -0.77
HLCS-201ENST00000336648 Q6ZUT4 128 aa10.24□□□□□ -0.77
HLCS-201ENST00000336648 ZNF503Q96F45 646 aa10.24□□□□□ -0.77
HLCS-201ENST00000336648 SPANXB1Q9NS25 103 aaPredicted RBP10.24□□□□□ -0.77
HLCS-201ENST00000336648 MRPL36Q9P0J6 103 aaKnown RBP10.24□□□□□ -0.77
HLCS-201ENST00000336648 IGKV1OR2-108A0A075B7D4 117 aa10.23□□□□□ -0.77
HLCS-201ENST00000336648 K7EQD1 137 aa10.23□□□□□ -0.77
HLCS-201ENST00000336648 CCL24O00175 119 aa10.23□□□□□ -0.77
HLCS-201ENST00000336648 CXCL5P42830 114 aa10.23□□□□□ -0.77
HLCS-201ENST00000336648 TIRAPP58753 221 aa10.23□□□□□ -0.77
HLCS-201ENST00000336648 PLA2G2CQ5R387 149 aa10.23□□□□□ -0.77
HLCS-201ENST00000336648 C9orf47Q6ZRZ4 202 aa10.23□□□□□ -0.77
HLCS-201ENST00000336648 KLF2Q9Y5W3 355 aaPredicted RBP10.23□□□□□ -0.77
HLCS-201ENST00000336648 CENPVL3A0A0U1RRI6 287 aa10.23□□□□□ -0.77
HLCS-201ENST00000336648 GNRH2O43555 120 aa10.23□□□□□ -0.77
HLCS-201ENST00000336648 ZNF503-AS2A6NEH8 195 aa10.23□□□□□ -0.77
HLCS-201ENST00000336648 PRR15LQ9BU68 103 aa10.23□□□□□ -0.77
HLCS-201ENST00000336648 RNASE8Q8TDE3 154 aaKnown RBP10.22□□□□□ -0.77
HLCS-201ENST00000336648 COX7A2LO14548 114 aa10.22□□□□□ -0.77
HLCS-201ENST00000336648 SPART-AS1P0CW21 52 aa10.22□□□□□ -0.77
HLCS-201ENST00000336648 HIGD1BQ9P298 99 aa10.22□□□□□ -0.77
HLCS-201ENST00000336648 CAMK2N2Q96S95 79 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms