RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 TRBV7-1A0A0A6YYK4 115 aa15.2■□□□□ 0.02
CDCA4-201ENST00000336219 LMO4P61968 165 aa15.2■□□□□ 0.02
CDCA4-201ENST00000336219 C12orf74Q32Q52 190 aa15.2■□□□□ 0.02
CDCA4-201ENST00000336219 SH2D6Q7Z4S9 175 aa15.2■□□□□ 0.02
CDCA4-201ENST00000336219 ZNF479Q96JC4 524 aa15.2■□□□□ 0.02
CDCA4-201ENST00000336219 A0A087WX48 190 aa15.2■□□□□ 0.02
CDCA4-201ENST00000336219 H3BVH4 76 aa15.2■□□□□ 0.02
CDCA4-201ENST00000336219 IGF1P05019 195 aa15.2■□□□□ 0.02
CDCA4-201ENST00000336219 SPANXN1Q5VSR9 72 aa15.2■□□□□ 0.02
CDCA4-201ENST00000336219 C8orf86Q6ZUL3 223 aa15.2■□□□□ 0.02
CDCA4-201ENST00000336219 MRPL53Q96EL3 112 aaKnown RBP15.2■□□□□ 0.02
CDCA4-201ENST00000336219 TMEM78Q5T7P6 136 aa15.19■□□□□ 0.02
CDCA4-201ENST00000336219 PRR9Q5T870 116 aa15.19■□□□□ 0.02
CDCA4-201ENST00000336219 HIST1H4GQ99525 98 aa15.19■□□□□ 0.02
CDCA4-201ENST00000336219 BPESC1Q9GZL8 116 aa15.19■□□□□ 0.02
CDCA4-201ENST00000336219 NPFFO15130 113 aa15.19■□□□□ 0.02
CDCA4-201ENST00000336219 C5orf56Q8N8D9 126 aa15.19■□□□□ 0.02
CDCA4-201ENST00000336219 U3KQE9 123 aa15.19■□□□□ 0.02
CDCA4-201ENST00000336219 SAMD13Q5VXD3 122 aa15.18■□□□□ 0.02
CDCA4-201ENST00000336219 FOXI2Q6ZQN5 318 aa15.18■□□□□ 0.02
CDCA4-201ENST00000336219 TSSC4Q9Y5U2 329 aaPredicted RBP15.18■□□□□ 0.02
CDCA4-201ENST00000336219 AZU1P20160 251 aa15.18■□□□□ 0.02
CDCA4-201ENST00000336219 SPANXB1Q9NS25 103 aaPredicted RBP15.18■□□□□ 0.02
CDCA4-201ENST00000336219 HIVEP3Q5T1R4 2406 aa15.18■□□□□ 0.02
CDCA4-201ENST00000336219 HIF1ANQ9NWT6 349 aa15.17■□□□□ 0.02
CDCA4-201ENST00000336219 PSMG4Q5JS54 123 aa15.17■□□□□ 0.02
CDCA4-201ENST00000336219 C9orf47Q6ZRZ4 202 aa15.17■□□□□ 0.02
CDCA4-201ENST00000336219 SMAGPQ0VAQ4 97 aa15.16■□□□□ 0.02
CDCA4-201ENST00000336219 ETDBQ3ZM63 59 aa15.16■□□□□ 0.02
CDCA4-201ENST00000336219 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.16■□□□□ 0.02
CDCA4-201ENST00000336219 DEFB1P60022 68 aa15.16■□□□□ 0.02
CDCA4-201ENST00000336219 ATP5G2Q06055 141 aa15.16■□□□□ 0.02
CDCA4-201ENST00000336219 SRSF1Q07955 248 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDCA4-201ENST00000336219 HLA-DRB4P13762 266 aa15.15■□□□□ 0.02
CDCA4-201ENST00000336219 HLA-DRB4X5D2U9 266 aa15.15■□□□□ 0.02
CDCA4-201ENST00000336219 TMEM219Q86XT9 240 aa15.14■□□□□ 0.01
CDCA4-201ENST00000336219 RPL39LQ96EH5 51 aaKnown RBP15.14■□□□□ 0.01
CDCA4-201ENST00000336219 CELSR1Q9NYQ6 3014 aa15.14■□□□□ 0.01
CDCA4-201ENST00000336219 TRBV7-3A0A075B6L6 115 aa15.14■□□□□ 0.01
CDCA4-201ENST00000336219 M0R381 172 aa15.14■□□□□ 0.01
CDCA4-201ENST00000336219 CYSLTR1Q9Y271 337 aa15.14■□□□□ 0.01
CDCA4-201ENST00000336219 PRSS47A8MTI9 375 aa15.13■□□□□ 0.01
CDCA4-201ENST00000336219 INSL3P51460 131 aa15.13■□□□□ 0.01
CDCA4-201ENST00000336219 DEFB104AQ8WTQ1 72 aa15.13■□□□□ 0.01
CDCA4-201ENST00000336219 SMIM2Q9BVW6 85 aa15.13■□□□□ 0.01
CDCA4-201ENST00000336219 C19orf54Q5BKX5 351 aa15.13■□□□□ 0.01
CDCA4-201ENST00000336219 C20orf173Q96LM9 149 aa15.13■□□□□ 0.01
CDCA4-201ENST00000336219 TRAV41A0A0B4J266 112 aa15.12■□□□□ 0.01
CDCA4-201ENST00000336219 PLNP26678 52 aa15.12■□□□□ 0.01
CDCA4-201ENST00000336219 C16orf92Q96LL3 132 aa15.12■□□□□ 0.01
CDCA4-201ENST00000336219 ATP6V0BQ99437 205 aa15.12■□□□□ 0.01
CDCA4-201ENST00000336219 SPAG8Q99932 426 aaPredicted RBP15.12■□□□□ 0.01
CDCA4-201ENST00000336219 IGHV4-4A0A075B6R2 117 aa15.12■□□□□ 0.01
CDCA4-201ENST00000336219 F8VRH5 84 aa15.12■□□□□ 0.01
CDCA4-201ENST00000336219 F8W1H4 67 aa15.12■□□□□ 0.01
CDCA4-201ENST00000336219 GLMPQ8WWB7 406 aa15.12■□□□□ 0.01
CDCA4-201ENST00000336219 SCGB3A1Q96QR1 104 aa15.12■□□□□ 0.01
CDCA4-201ENST00000336219 LINC00527Q9UJ94 153 aa15.12■□□□□ 0.01
CDCA4-201ENST00000336219 MOB4Q9Y3A3 225 aa15.12■□□□□ 0.01
CDCA4-201ENST00000336219 CHTOPQ9Y3Y2 248 aaKnown RBP15.12■□□□□ 0.01
CDCA4-201ENST00000336219 AKAP6Q13023 2319 aa15.11■□□□□ 0.01
CDCA4-201ENST00000336219 H7C1H1 209 aa15.11■□□□□ 0.01
CDCA4-201ENST00000336219 GAGE12HA6NDE8 117 aa15.11■□□□□ 0.01
CDCA4-201ENST00000336219 FAM223BA6NKX1 122 aa15.11■□□□□ 0.01
CDCA4-201ENST00000336219 RRN3P1Q2M238 152 aa15.11■□□□□ 0.01
CDCA4-201ENST00000336219 FAM223AQ8IWN6 122 aa15.11■□□□□ 0.01
CDCA4-201ENST00000336219 RASL10AQ92737 203 aa15.11■□□□□ 0.01
CDCA4-201ENST00000336219 SIGMAR1Q99720 223 aa15.11■□□□□ 0.01
CDCA4-201ENST00000336219 MYMXA0A1B0GTQ4 84 aa15.1■□□□□ 0.01
CDCA4-201ENST00000336219 VPS13CQ709C8 3753 aa15.1■□□□□ 0.01
CDCA4-201ENST00000336219 OR11H12B2RN74 326 aa15.1■□□□□ 0.01
CDCA4-201ENST00000336219 TAL2Q16559 108 aa15.1■□□□□ 0.01
CDCA4-201ENST00000336219 SFTA2Q6UW10 78 aa15.1■□□□□ 0.01
CDCA4-201ENST00000336219 C9orf139Q6ZV77 190 aa15.1■□□□□ 0.01
CDCA4-201ENST00000336219 C14orf178Q8N769 122 aaPredicted RBP15.1■□□□□ 0.01
CDCA4-201ENST00000336219 OR11H1Q8NG94 326 aa15.1■□□□□ 0.01
CDCA4-201ENST00000336219 OR11H2Q8NH07 326 aa15.1■□□□□ 0.01
CDCA4-201ENST00000336219 ITLN2Q8WWU7 325 aaPredicted RBP15.1■□□□□ 0.01
CDCA4-201ENST00000336219 IGHV3OR16-10A0A075B7F0 116 aa15.09■□□□□ 0.01
CDCA4-201ENST00000336219 LGALS1P09382 135 aaKnown RBP15.09■□□□□ 0.01
CDCA4-201ENST00000336219 CRIP2P52943 208 aaPredicted RBP15.09■□□□□ 0.01
CDCA4-201ENST00000336219 CD300EQ496F6 205 aaPredicted RBP15.09■□□□□ 0.01
CDCA4-201ENST00000336219 GAGE13Q4V321 117 aa15.09■□□□□ 0.01
CDCA4-201ENST00000336219 PRO0461Q9UI25 63 aa15.09■□□□□ 0.01
CDCA4-201ENST00000336219 LENEPQ9Y5L5 61 aa15.09■□□□□ 0.01
CDCA4-201ENST00000336219 ARL3P36405 182 aa15.08■□□□□ 0.01
CDCA4-201ENST00000336219 ABCA2Q9BZC7 2435 aa15.08■□□□□ 0.01
CDCA4-201ENST00000336219 SUMO2P61956 95 aaKnown RBP15.08■□□□□ 0
CDCA4-201ENST00000336219 MORN3Q6PF18 240 aaPredicted RBP15.08■□□□□ 0
CDCA4-201ENST00000336219 NEXN-AS1Q8NBZ9 246 aa15.08■□□□□ 0
CDCA4-201ENST00000336219 TRAV12-1A0A0B4J245 112 aa15.07■□□□□ 0
CDCA4-201ENST00000336219 MGPP08493 103 aa15.07■□□□□ 0
CDCA4-201ENST00000336219 TOMM6Q96B49 74 aa15.07■□□□□ 0
CDCA4-201ENST00000336219 MRAP2Q96G30 205 aa15.07■□□□□ 0
CDCA4-201ENST00000336219 LY6DQ14210 128 aa15.07■□□□□ 0
CDCA4-201ENST00000336219 UNQ9165/PRO28630Q6UXU0 137 aa15.07■□□□□ 0
CDCA4-201ENST00000336219 GPHB5Q86YW7 130 aa15.07■□□□□ 0
CDCA4-201ENST00000336219 BAALCQ8WXS3 180 aa15.07■□□□□ 0
CDCA4-201ENST00000336219 PLEKHB2Q96CS7 222 aa15.07■□□□□ 0
CDCA4-201ENST00000336219 RNF223E7ERA6 249 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms