RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 LINC01548A6NM66 108 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 H3BMG7 143 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 K7EP34 96 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 PSMB2P49721 201 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 RPS20P60866 119 aaKnown RBP5.08□□□□□ -1.6
HMG20A-201ENST00000336216 URB1-AS1Q96HZ7 61 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 UBE2E2Q96LR5 201 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 TACC2O95359 2948 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 MGAM2Q2M2H8 2515 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 TRAV12-2A0A075B6T6 113 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 A0A1B0GV72 72 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 KNCNA6PVL3 124 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 H3BRM9 83 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 FOXE3Q13461 319 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 TTC9CQ8N5M4 171 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 SCGB3A1Q96QR1 104 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 KIR2DL4Q99706 377 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 IGHV1-69DA0A0B4J2H0 117 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 A0A1W2PPM0 123 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 NPYP01303 97 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 IGHV1-69P01742 117 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 IGHV4-39P01824 125 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 IGHV4-59P01825 116 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 GATA1P15976 413 aaPredicted RBP5.07□□□□□ -1.6
HMG20A-201ENST00000336216 POU2AF1Q16633 256 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 LINC00311Q8N616 119 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 OR5A1Q8NGJ0 315 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 RNF5Q99942 180 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 MRPL16Q9NX20 251 aaKnown RBP5.07□□□□□ -1.6
HMG20A-201ENST00000336216 CYSLTR1Q9Y271 337 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 TRAV26-2A0A0B4J265 109 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 FNDC10F2Z333 226 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 NDUFS8O00217 210 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 PF4P02776 101 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 RRN3P1Q2M238 152 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 DEFB136Q30KP8 78 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 CHAC1Q9BUX1 264 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 MSRB1Q9NZV6 116 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 IGLV1-47P01700 117 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 PPBPP02775 128 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 CGB3P0DN86 165 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 CGB7P0DN87 165 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 HTN3P15516 51 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 FXYD2P54710 66 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 MRPL51Q4U2R6 128 aaKnown RBP5.07□□□□□ -1.6
HMG20A-201ENST00000336216 C1orf122Q6ZSJ8 110 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 OR9G4Q8NGQ1 327 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 TMEM158Q8WZ71 300 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 RAX2Q96IS3 184 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 SLC50A1Q9BRV3 221 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 OR11H12B2RN74 326 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 LTAP01374 205 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 IGHV3-53P01767 116 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 LINC01545Q5VT33 79 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 HIST2H2BCQ6DN03 193 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 OR11H1Q8NG94 326 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 OR11H2Q8NH07 326 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 Q96MF0 132 aa5.07□□□□□ -1.6
HMG20A-201ENST00000336216 PTPRBP23467 1997 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 A0A1B0GXF2 115 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 K7EIM0 57 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 IGKCP01834 107 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 WFDC2Q14508 124 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 SPINK13Q1W4C9 94 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 IGHV7-81A0A0B4J1V7 117 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 CRXO43186 299 aaPredicted RBP5.06□□□□□ -1.6
HMG20A-201ENST00000336216 FAM104BQ5XKR9 115 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 NEGR1Q7Z3B1 354 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 DYNAPQ8N1N2 210 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 NCOR1P1Q9H4R4 102 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 IGKV1D-37A0A075B6S9 117 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 TRAV21A0A0B4J279 112 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 OOSP1A8MZH6 123 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 DPM2O94777 84 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 CKS1BP61024 79 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 GAGE13Q4V321 117 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 SYT8Q8NBV8 401 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 KLHL30-AS1Q8NEE0 82 aa5.06□□□□□ -1.6
HMG20A-201ENST00000336216 TEP1Q99973 2627 aaKnown RBP5.05□□□□□ -1.6
HMG20A-201ENST00000336216 CENPVL3A0A0U1RRI6 287 aa5.05□□□□□ -1.6
HMG20A-201ENST00000336216 TMEM8BA6NDV4 472 aa5.05□□□□□ -1.6
HMG20A-201ENST00000336216 HOXB4P17483 251 aaPredicted RBP5.05□□□□□ -1.6
HMG20A-201ENST00000336216 CD300EQ496F6 205 aaPredicted RBP5.05□□□□□ -1.6
HMG20A-201ENST00000336216 ZNF492Q9P255 531 aa5.05□□□□□ -1.6
HMG20A-201ENST00000336216 KLK9Q9UKQ9 250 aa5.05□□□□□ -1.6
HMG20A-201ENST00000336216 DEFB131AP59861 70 aa5.05□□□□□ -1.6
HMG20A-201ENST00000336216 CR1LQ2VPA4 569 aa5.05□□□□□ -1.6
HMG20A-201ENST00000336216 DEFB112Q30KQ8 113 aa5.05□□□□□ -1.6
HMG20A-201ENST00000336216 C8orf86Q6ZUL3 223 aa5.05□□□□□ -1.6
HMG20A-201ENST00000336216 PRR25Q96S07 402 aa5.05□□□□□ -1.6
HMG20A-201ENST00000336216 TRGV2A0A075B6R0 118 aa5.05□□□□□ -1.6
HMG20A-201ENST00000336216 NPIPB6E9PJ23 425 aa5.05□□□□□ -1.6
HMG20A-201ENST00000336216 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.05□□□□□ -1.6
HMG20A-201ENST00000336216 IGLV2-23P01705 113 aa5.05□□□□□ -1.6
HMG20A-201ENST00000336216 GP9P14770 177 aa5.05□□□□□ -1.6
HMG20A-201ENST00000336216 HERVK_113P61574 105 aa5.05□□□□□ -1.6
HMG20A-201ENST00000336216 CT83Q5H943 113 aa5.05□□□□□ -1.6
HMG20A-201ENST00000336216 C2orf91Q6ZV80 131 aa5.05□□□□□ -1.6
HMG20A-201ENST00000336216 SRSF8Q9BRL6 282 aaKnown RBP5.05□□□□□ -1.6
HMG20A-201ENST00000336216 GFRA4Q9GZZ7 299 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms