RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 TMEM242Q9NWH2 141 aa12.62□□□□□ -0.39
CHGA-202ENST00000334654 A0A087WWC5 75 aa12.61□□□□□ -0.39
CHGA-202ENST00000334654 SH2D1AO60880 128 aa12.61□□□□□ -0.39
CHGA-202ENST00000334654 Q8NAQ8 132 aa12.61□□□□□ -0.39
CHGA-202ENST00000334654 ZMAT4Q9H898 229 aa12.61□□□□□ -0.39
CHGA-202ENST00000334654 IGHV1OR15-1A0A075B7D0 117 aa12.6□□□□□ -0.39
CHGA-202ENST00000334654 C19orf71A6NCJ1 209 aa12.6□□□□□ -0.39
CHGA-202ENST00000334654 OR5I1Q13606 314 aa12.6□□□□□ -0.39
CHGA-202ENST00000334654 TDRG1Q3Y452 100 aa12.6□□□□□ -0.39
CHGA-202ENST00000334654 MUC21Q5SSG8 566 aa12.6□□□□□ -0.39
CHGA-202ENST00000334654 FAM162BQ5T6X4 162 aa12.6□□□□□ -0.39
CHGA-202ENST00000334654 TP53TG3Q9ULZ0 132 aa12.6□□□□□ -0.39
CHGA-202ENST00000334654 IGKV3D-20A0A0C4DH25 116 aa12.59□□□□□ -0.39
CHGA-202ENST00000334654 SMIM9A6NGZ8 99 aa12.59□□□□□ -0.39
CHGA-202ENST00000334654 M0R036 132 aa12.59□□□□□ -0.39
CHGA-202ENST00000334654 MGST1P10620 155 aaKnown RBP12.59□□□□□ -0.39
CHGA-202ENST00000334654 ANXA2RQ3ZCQ2 193 aa12.59□□□□□ -0.39
CHGA-202ENST00000334654 LINC01551Q86U37 167 aa12.59□□□□□ -0.39
CHGA-202ENST00000334654 CTDSP1Q9GZU7 261 aa12.59□□□□□ -0.39
CHGA-202ENST00000334654 IGHV4-28A0A0C4DH34 117 aa12.59□□□□□ -0.39
CHGA-202ENST00000334654 PLAC8L1A1L4L8 177 aa12.59□□□□□ -0.39
CHGA-202ENST00000334654 C7orf77A4D0Y5 90 aa12.59□□□□□ -0.39
CHGA-202ENST00000334654 MIFP14174 115 aa12.59□□□□□ -0.39
CHGA-202ENST00000334654 HTN1P15515 57 aa12.59□□□□□ -0.39
CHGA-202ENST00000334654 PRR27Q6MZM9 219 aa12.59□□□□□ -0.39
CHGA-202ENST00000334654 CXorf65A6NEN9 183 aa12.58□□□□□ -0.4
CHGA-202ENST00000334654 GNRH2O43555 120 aa12.58□□□□□ -0.4
CHGA-202ENST00000334654 RRN3P1Q2M238 152 aa12.58□□□□□ -0.4
CHGA-202ENST00000334654 RNASE8Q8TDE3 154 aaKnown RBP12.58□□□□□ -0.4
CHGA-202ENST00000334654 RPL23P62829 140 aaKnown RBP12.57□□□□□ -0.4
CHGA-202ENST00000334654 LINC01559Q495D7 138 aa12.57□□□□□ -0.4
CHGA-202ENST00000334654 ATRAIDQ6UW56 229 aa12.57□□□□□ -0.4
CHGA-202ENST00000334654 FAM159AQ6UWV7 190 aa12.57□□□□□ -0.4
CHGA-202ENST00000334654 C11orf72Q8NBR9 251 aa12.57□□□□□ -0.4
CHGA-202ENST00000334654 SMCO4Q9NRQ5 59 aa12.57□□□□□ -0.4
CHGA-202ENST00000334654 NAGKQ9UJ70 344 aa12.57□□□□□ -0.4
CHGA-202ENST00000334654 DEFB4AO15263 64 aa12.56□□□□□ -0.4
CHGA-202ENST00000334654 MT-ND4LP03901 98 aa12.56□□□□□ -0.4
CHGA-202ENST00000334654 TYMSP04818 313 aa12.56□□□□□ -0.4
CHGA-202ENST00000334654 NUDT10Q8NFP7 164 aa12.56□□□□□ -0.4
CHGA-202ENST00000334654 TMEM263Q8WUH6 116 aaKnown RBP12.56□□□□□ -0.4
CHGA-202ENST00000334654 NUDT11Q96G61 164 aa12.56□□□□□ -0.4
CHGA-202ENST00000334654 RPS10P5Q9NQ39 176 aa12.56□□□□□ -0.4
CHGA-202ENST00000334654 CBY3A6NI87 242 aa12.55□□□□□ -0.4
CHGA-202ENST00000334654 PPP1R2P9O14990 202 aa12.55□□□□□ -0.4
CHGA-202ENST00000334654 ORM1P02763 201 aa12.55□□□□□ -0.4
CHGA-202ENST00000334654 ANAPC16Q96DE5 110 aa12.55□□□□□ -0.4
CHGA-202ENST00000334654 KCNS1Q96KK3 526 aa12.55□□□□□ -0.4
CHGA-202ENST00000334654 RNASE7Q9H1E1 156 aaKnown RBP12.55□□□□□ -0.4
CHGA-202ENST00000334654 BIN3Q9NQY0 253 aa12.55□□□□□ -0.4
CHGA-202ENST00000334654 MDFICQ9P1T7 246 aa12.55□□□□□ -0.4
CHGA-202ENST00000334654 RPL19P84098 196 aaKnown RBP12.54□□□□□ -0.4
CHGA-202ENST00000334654 ZNF493Q6ZR52 646 aa12.54□□□□□ -0.4
CHGA-202ENST00000334654 IL17DQ8TAD2 202 aa12.54□□□□□ -0.4
CHGA-202ENST00000334654 ISOC2Q96AB3 205 aa12.54□□□□□ -0.4
CHGA-202ENST00000334654 MUC4Q99102 2169 aa12.54□□□□□ -0.4
CHGA-202ENST00000334654 IGHV3-16A0A0C4DH30 117 aa12.53□□□□□ -0.4
CHGA-202ENST00000334654 IBA57Q5T440 356 aaKnown RBP12.53□□□□□ -0.4
CHGA-202ENST00000334654 FAM231DQ6ZW35 169 aa12.53□□□□□ -0.4
CHGA-202ENST00000334654 C16orf74Q96GX8 76 aa12.53□□□□□ -0.4
CHGA-202ENST00000334654 C11orf68Q9H3H3 251 aaKnown RBP12.53□□□□□ -0.4
CHGA-202ENST00000334654 GSN-AS1Q9NRJ2 163 aa12.53□□□□□ -0.4
CHGA-202ENST00000334654 A0A0J9YWU9 116 aa12.53□□□□□ -0.4
CHGA-202ENST00000334654 RNASE3P12724 160 aaKnown RBP12.53□□□□□ -0.4
CHGA-202ENST00000334654 DNLZQ5SXM8 178 aa12.53□□□□□ -0.4
CHGA-202ENST00000334654 DAZAP1Q96EP5 407 aaKnown RBP12.53□□□□□ -0.4
CHGA-202ENST00000334654 U3KQK5 164 aa12.53□□□□□ -0.4
CHGA-202ENST00000334654 TRGV11A0A075B6L2 103 aa12.52□□□□□ -0.41
CHGA-202ENST00000334654 TMSB15BA0A087X1C1 80 aa12.52□□□□□ -0.41
CHGA-202ENST00000334654 TCL1AP56279 114 aa12.52□□□□□ -0.41
CHGA-202ENST00000334654 ADIRFQ15847 76 aa12.52□□□□□ -0.41
CHGA-202ENST00000334654 GRIFINA4D1Z8 144 aa12.51□□□□□ -0.41
CHGA-202ENST00000334654 TMEM189A5PLL7 270 aa12.51□□□□□ -0.41
CHGA-202ENST00000334654 P01737 135 aa12.51□□□□□ -0.41
CHGA-202ENST00000334654 IMMP2LQ96T52 175 aa12.51□□□□□ -0.41
CHGA-202ENST00000334654 EDA2RQ9HAV5 297 aa12.51□□□□□ -0.41
CHGA-202ENST00000334654 OSTCQ9NRP0 149 aa12.51□□□□□ -0.41
CHGA-202ENST00000334654 CELA1Q9UNI1 258 aa12.51□□□□□ -0.41
CHGA-202ENST00000334654 SCO1O75880 301 aa12.5□□□□□ -0.41
CHGA-202ENST00000334654 CXCL1P09341 107 aa12.5□□□□□ -0.41
CHGA-202ENST00000334654 EMP1P54849 157 aa12.5□□□□□ -0.41
CHGA-202ENST00000334654 C15orf54Q8N8G6 183 aa12.5□□□□□ -0.41
CHGA-202ENST00000334654 OR2D3Q8NGH3 330 aa12.5□□□□□ -0.41
CHGA-202ENST00000334654 C9orf85Q96MD7 179 aa12.5□□□□□ -0.41
CHGA-202ENST00000334654 ERVFC1-1P60608 527 aa12.49□□□□□ -0.41
CHGA-202ENST00000334654 DAZ2Q13117 558 aaKnown RBP12.49□□□□□ -0.41
CHGA-202ENST00000334654 SFRP2Q96HF1 295 aa12.49□□□□□ -0.41
CHGA-202ENST00000334654 BTF3L4Q96K17 158 aa12.49□□□□□ -0.41
CHGA-202ENST00000334654 RPP21Q9H633 154 aaKnown RBP12.49□□□□□ -0.41
CHGA-202ENST00000334654 NOP10Q9NPE3 64 aaKnown RBP12.49□□□□□ -0.41
CHGA-202ENST00000334654 DKK2Q9UBU2 259 aa12.49□□□□□ -0.41
CHGA-202ENST00000334654 TIMM8BQ9Y5J9 83 aaPredicted RBP12.49□□□□□ -0.41
CHGA-202ENST00000334654 GATCO43716 136 aaKnown RBP12.48□□□□□ -0.41
CHGA-202ENST00000334654 GZMBP10144 247 aa12.48□□□□□ -0.41
CHGA-202ENST00000334654 ZNF415Q09FC8 603 aa12.48□□□□□ -0.41
CHGA-202ENST00000334654 RNF212Q495C1 297 aa12.48□□□□□ -0.41
CHGA-202ENST00000334654 FAM222AQ5U5X8 452 aa12.48□□□□□ -0.41
CHGA-202ENST00000334654 V9GYV3 84 aa12.48□□□□□ -0.41
CHGA-202ENST00000334654 ASIPP42127 132 aa12.47□□□□□ -0.41
CHGA-202ENST00000334654 SCRT2Q9NQ03 307 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 257.7 ms