RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 RBX1P62877 108 aa4.34□□□□□ -1.71
PTPRB-202ENST00000334414 OBSL1O75147 1896 aa4.34□□□□□ -1.71
PTPRB-202ENST00000334414 TIMM17BO60830 172 aa4.34□□□□□ -1.71
PTPRB-202ENST00000334414 SERP1Q9Y6X1 66 aa4.34□□□□□ -1.71
PTPRB-202ENST00000334414 NPBQ8NG41 125 aa4.34□□□□□ -1.71
PTPRB-202ENST00000334414 KIR2DL5BQ8NHK3 375 aa4.34□□□□□ -1.71
PTPRB-202ENST00000334414 COL4A1P02462 1669 aa4.34□□□□□ -1.71
PTPRB-202ENST00000334414 ELANEP08246 267 aa4.34□□□□□ -1.71
PTPRB-202ENST00000334414 TRBV30A0A0K0K1B3 111 aa4.34□□□□□ -1.71
PTPRB-202ENST00000334414 C17orf82Q86X59 251 aaPredicted RBP4.34□□□□□ -1.71
PTPRB-202ENST00000334414 ETDCA0A1B0GVM5 59 aa4.34□□□□□ -1.71
PTPRB-202ENST00000334414 MDS2Q8NDY4 140 aa4.34□□□□□ -1.71
PTPRB-202ENST00000334414 DIRC1Q969H9 104 aa4.34□□□□□ -1.71
PTPRB-202ENST00000334414 ODF3Q96PU9 254 aa4.34□□□□□ -1.71
PTPRB-202ENST00000334414 TP73-AS1Q9UF72 201 aa4.34□□□□□ -1.71
PTPRB-202ENST00000334414 CSRP1P21291 193 aaKnown RBP4.34□□□□□ -1.72
PTPRB-202ENST00000334414 C17orf58Q2M2W7 97 aa4.34□□□□□ -1.72
PTPRB-202ENST00000334414 TMEM89A2RUT3 159 aa4.34□□□□□ -1.72
PTPRB-202ENST00000334414 SPRY4Q9C004 299 aa4.34□□□□□ -1.72
PTPRB-202ENST00000334414 FAM222AQ5U5X8 452 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 Q6ZSR3 168 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 ZNF491Q8N8L2 437 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 H3BUX3 64 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 WFDC12Q8WWY7 111 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 TRAV4A0A0B4J268 109 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 NDUFA1O15239 70 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 WIPF3A6NGB9 483 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 RPL18AQ02543 176 aaKnown RBP4.33□□□□□ -1.72
PTPRB-202ENST00000334414 C1orf195Q5TG92 126 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 COLQQ9Y215 455 aaPredicted RBP4.33□□□□□ -1.72
PTPRB-202ENST00000334414 CENPVL3A0A0U1RRI6 287 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 COX7CP15954 63 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 FAM110AQ9BQ89 295 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 IGHV3-53P01767 116 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 SPINK13Q1W4C9 94 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 GTSF1Q8WW33 167 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 KLK9Q9UKQ9 250 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 TEX22C9J3V5 150 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 CDPF1Q6NVV7 123 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 SELENOKQ9Y6D0 94 aa4.33□□□□□ -1.72
PTPRB-202ENST00000334414 TIRAPP58753 221 aa4.32□□□□□ -1.72
PTPRB-202ENST00000334414 WFDC2Q14508 124 aa4.32□□□□□ -1.72
PTPRB-202ENST00000334414 KRTAP27-1Q3LI81 207 aa4.32□□□□□ -1.72
PTPRB-202ENST00000334414 FGF23Q9GZV9 251 aaPredicted RBP4.32□□□□□ -1.72
PTPRB-202ENST00000334414 NSUN5P1Q3KNT7 163 aa4.32□□□□□ -1.72
PTPRB-202ENST00000334414 DAND5Q8N907 189 aa4.32□□□□□ -1.72
PTPRB-202ENST00000334414 SCN5AQ14524 2016 aa4.32□□□□□ -1.72
PTPRB-202ENST00000334414 DEFB130BP0DP73 79 aa4.32□□□□□ -1.72
PTPRB-202ENST00000334414 DEFB130AP0DP74 79 aa4.32□□□□□ -1.72
PTPRB-202ENST00000334414 IGKV3D-7A0A0C4DH55 119 aa4.32□□□□□ -1.72
PTPRB-202ENST00000334414 C2orf70A6NJV1 201 aa4.32□□□□□ -1.72
PTPRB-202ENST00000334414 MT-ATP8P03928 68 aa4.32□□□□□ -1.72
PTPRB-202ENST00000334414 GNLYP22749 145 aa4.32□□□□□ -1.72
PTPRB-202ENST00000334414 TEX49A0A1B0GTD5 131 aa4.32□□□□□ -1.72
PTPRB-202ENST00000334414 TRBV7-3A0A075B6L6 115 aa4.32□□□□□ -1.72
PTPRB-202ENST00000334414 NXPH4O95158 308 aa4.32□□□□□ -1.72
PTPRB-202ENST00000334414 M0QXV9 152 aa4.32□□□□□ -1.72
PTPRB-202ENST00000334414 UNQ6494/PRO21346Q6UXR6 183 aa4.32□□□□□ -1.72
PTPRB-202ENST00000334414 DOCK6Q96HP0 2047 aa4.32□□□□□ -1.72
PTPRB-202ENST00000334414 DEFB131AP59861 70 aa4.31□□□□□ -1.72
PTPRB-202ENST00000334414 KIAA1549LQ6ZVL6 1849 aa4.31□□□□□ -1.72
PTPRB-202ENST00000334414 A0A0J9YX75 114 aa4.31□□□□□ -1.72
PTPRB-202ENST00000334414 A0A1B0GXF2 115 aa4.31□□□□□ -1.72
PTPRB-202ENST00000334414 LECT2O14960 151 aa4.31□□□□□ -1.72
PTPRB-202ENST00000334414 ANGP03950 147 aaKnown RBP4.31□□□□□ -1.72
PTPRB-202ENST00000334414 NEXN-AS1Q8NBZ9 246 aa4.31□□□□□ -1.72
PTPRB-202ENST00000334414 FREM3P0C091 2139 aa4.31□□□□□ -1.72
PTPRB-202ENST00000334414 KIAA1671Q9BY89 1806 aa4.31□□□□□ -1.72
PTPRB-202ENST00000334414 EIF4EBP1Q13541 118 aaPredicted RBP4.31□□□□□ -1.72
PTPRB-202ENST00000334414 SPTSSBQ8NFR3 76 aa4.31□□□□□ -1.72
PTPRB-202ENST00000334414 USP17L23D6RBM5 183 aa4.31□□□□□ -1.72
PTPRB-202ENST00000334414 IGFL3Q6UXB1 125 aa4.31□□□□□ -1.72
PTPRB-202ENST00000334414 U3KQK5 164 aa4.31□□□□□ -1.72
PTPRB-202ENST00000334414 IGLV3-9A0A075B6K5 115 aa4.31□□□□□ -1.72
PTPRB-202ENST00000334414 WI2-2373I1.2A0A1W2PRP0 233 aa4.31□□□□□ -1.72
PTPRB-202ENST00000334414 FAM19A3Q7Z5A8 133 aa4.31□□□□□ -1.72
PTPRB-202ENST00000334414 TMEM131Q92545 1883 aa4.31□□□□□ -1.72
PTPRB-202ENST00000334414 CD24P25063 80 aa4.31□□□□□ -1.72
PTPRB-202ENST00000334414 F5H768 121 aa4.3□□□□□ -1.72
PTPRB-202ENST00000334414 Q6JHZ5 121 aa4.3□□□□□ -1.72
PTPRB-202ENST00000334414 CLEC2BQ92478 149 aa4.3□□□□□ -1.72
PTPRB-202ENST00000334414 TRBV10-1A0A0K0K1A3 114 aa4.3□□□□□ -1.72
PTPRB-202ENST00000334414 ZNF524Q96C55 264 aa4.3□□□□□ -1.72
PTPRB-202ENST00000334414 IGLV1-44P01699 117 aa4.3□□□□□ -1.72
PTPRB-202ENST00000334414 COX7BP24311 80 aa4.3□□□□□ -1.72
PTPRB-202ENST00000334414 LINC00526Q96FQ7 95 aa4.3□□□□□ -1.72
PTPRB-202ENST00000334414 FNDC1Q4ZHG4 1894 aaPredicted RBP4.3□□□□□ -1.72
PTPRB-202ENST00000334414 RPL35AP18077 110 aaKnown RBP4.3□□□□□ -1.72
PTPRB-202ENST00000334414 TFF2Q03403 129 aa4.3□□□□□ -1.72
PTPRB-202ENST00000334414 NRACQ8N912 160 aa4.3□□□□□ -1.72
PTPRB-202ENST00000334414 MGAMO43451 1857 aa4.3□□□□□ -1.72
PTPRB-202ENST00000334414 C19orf71A6NCJ1 209 aa4.3□□□□□ -1.72
PTPRB-202ENST00000334414 HOXB4P17483 251 aaPredicted RBP4.3□□□□□ -1.72
PTPRB-202ENST00000334414 LOXL1Q08397 574 aaPredicted RBP4.3□□□□□ -1.72
PTPRB-202ENST00000334414 BRWD3Q6RI45 1802 aa4.3□□□□□ -1.72
PTPRB-202ENST00000334414 TNRC6BQ9UPQ9 1833 aaKnown RBP4.3□□□□□ -1.72
PTPRB-202ENST00000334414 CLPSL1A2RUU4 121 aa4.3□□□□□ -1.72
PTPRB-202ENST00000334414 PRR31Q5SQ13 230 aa4.3□□□□□ -1.72
PTPRB-202ENST00000334414 SMIM26A0A096LP01 95 aa4.3□□□□□ -1.72
PTPRB-202ENST00000334414 TFF1P04155 84 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms