RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 KIR3DS1Q14943 382 aa4.32□□□□□ -1.72
USP16-201ENST00000334352 CXorf1O96002 111 aa4.31□□□□□ -1.72
USP16-201ENST00000334352 GIPP09681 153 aaPredicted RBP4.31□□□□□ -1.72
USP16-201ENST00000334352 FGF8P55075 233 aaPredicted RBP4.31□□□□□ -1.72
USP16-201ENST00000334352 LINC00315P59091 139 aa4.31□□□□□ -1.72
USP16-201ENST00000334352 FFAR4Q5NUL3 377 aa4.31□□□□□ -1.72
USP16-201ENST00000334352 DPPA3Q6W0C5 159 aa4.31□□□□□ -1.72
USP16-201ENST00000334352 SPATA12Q7Z6I5 190 aa4.31□□□□□ -1.72
USP16-201ENST00000334352 EXOC3-AS1Q8N2X6 119 aa4.31□□□□□ -1.72
USP16-201ENST00000334352 PPP1R1CQ8WVI7 109 aa4.31□□□□□ -1.72
USP16-201ENST00000334352 PCNPQ8WW12 178 aaKnown RBP4.31□□□□□ -1.72
USP16-201ENST00000334352 WFDC1Q9HC57 220 aa4.31□□□□□ -1.72
USP16-201ENST00000334352 LY96Q9Y6Y9 160 aa4.31□□□□□ -1.72
USP16-201ENST00000334352 A0A087WWC5 75 aa4.31□□□□□ -1.72
USP16-201ENST00000334352 A8MWV9 139 aa4.31□□□□□ -1.72
USP16-201ENST00000334352 K7EQM0 130 aa4.31□□□□□ -1.72
USP16-201ENST00000334352 S100A10P60903 97 aa4.31□□□□□ -1.72
USP16-201ENST00000334352 FCN2Q15485 313 aa4.31□□□□□ -1.72
USP16-201ENST00000334352 LINC00479Q96M42 142 aa4.31□□□□□ -1.72
USP16-201ENST00000334352 FAM210AQ96ND0 272 aa4.31□□□□□ -1.72
USP16-201ENST00000334352 TM2D2Q9BX73 214 aa4.31□□□□□ -1.72
USP16-201ENST00000334352 MBD2Q9UBB5 411 aa4.31□□□□□ -1.72
USP16-201ENST00000334352 M0R2N4 97 aa4.3□□□□□ -1.72
USP16-201ENST00000334352 M0R3E3 92 aa4.3□□□□□ -1.72
USP16-201ENST00000334352 RHODO00212 210 aa4.3□□□□□ -1.72
USP16-201ENST00000334352 TYMSP04818 313 aa4.3□□□□□ -1.72
USP16-201ENST00000334352 MGST1P10620 155 aaKnown RBP4.3□□□□□ -1.72
USP16-201ENST00000334352 HTN3P15516 51 aa4.3□□□□□ -1.72
USP16-201ENST00000334352 SRIP30626 198 aa4.3□□□□□ -1.72
USP16-201ENST00000334352 RHOHQ15669 191 aa4.3□□□□□ -1.72
USP16-201ENST00000334352 FAM159AQ6UWV7 190 aa4.3□□□□□ -1.72
USP16-201ENST00000334352 ZFP30Q9Y2G7 519 aa4.3□□□□□ -1.72
USP16-201ENST00000334352 TRGV2A0A075B6R0 118 aa4.3□□□□□ -1.72
USP16-201ENST00000334352 IGKV2-40A0A087WW87 121 aaPredicted RBP4.3□□□□□ -1.72
USP16-201ENST00000334352 TRGV1A0A0A0MS02 117 aa4.3□□□□□ -1.72
USP16-201ENST00000334352 TRBV10-1A0A0K0K1A3 114 aa4.3□□□□□ -1.72
USP16-201ENST00000334352 PGPEP1LA6NFU8 196 aa4.3□□□□□ -1.72
USP16-201ENST00000334352 IGKV2D-40P01614 121 aaPredicted RBP4.3□□□□□ -1.72
USP16-201ENST00000334352 TCRAP04437 139 aa4.3□□□□□ -1.72
USP16-201ENST00000334352 EVI2AP22794 236 aa4.3□□□□□ -1.72
USP16-201ENST00000334352 UBE2L3P68036 154 aaKnown RBP4.3□□□□□ -1.72
USP16-201ENST00000334352 LGALSLQ3ZCW2 172 aaPredicted RBP4.3□□□□□ -1.72
USP16-201ENST00000334352 HIST1H2BAQ96A08 127 aa4.3□□□□□ -1.72
USP16-201ENST00000334352 TVP23CQ96ET8 276 aa4.3□□□□□ -1.72
USP16-201ENST00000334352 NDFIP1Q9BT67 221 aa4.3□□□□□ -1.72
USP16-201ENST00000334352 IGLV2-18A0A075B6J9 118 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 PRM2P04554 102 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 XGP55808 180 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 TMEM97Q5BJF2 176 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 CFAP126Q5VTH2 177 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 MAPKAPK5-AS1Q8N8E1 139 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 SMIM12Q96EX1 92 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 IL36BQ9NZH7 164 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 EPDR1Q9UM22 224 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 PCLOQ9Y6V0 5065 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 FAM25EA8MYX2 175 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 GCHFRP30047 84 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 PPT1P50897 306 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 KRTAP10-2P60368 255 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 CYB561D1Q8N8Q1 229 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 OR10G7Q8NGN6 311 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 PRADC1Q9BSG0 188 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 ACTR3CQ9C0K3 210 aaPredicted RBP4.29□□□□□ -1.72
USP16-201ENST00000334352 PARLQ9H300 379 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 TRAV8-6A0A0B4J262 113 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 OR5I1Q13606 314 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 LINC01559Q495D7 138 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 GCSAMLQ5JQS6 135 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 GTSF1LQ9H1H1 148 aa4.29□□□□□ -1.72
USP16-201ENST00000334352 CTXND1A0A1B0GTU2 59 aa4.28□□□□□ -1.72
USP16-201ENST00000334352 ZNF345Q14585 488 aa4.28□□□□□ -1.72
USP16-201ENST00000334352 SMUG1Q53HV7 270 aa4.28□□□□□ -1.72
USP16-201ENST00000334352 WDR73Q6P4I2 378 aa4.28□□□□□ -1.72
USP16-201ENST00000334352 THAP6Q8TBB0 222 aa4.28□□□□□ -1.72
USP16-201ENST00000334352 SFRP2Q96HF1 295 aa4.28□□□□□ -1.72
USP16-201ENST00000334352 FMC1Q96HJ9 113 aa4.28□□□□□ -1.72
USP16-201ENST00000334352 MDFICQ9P1T7 246 aa4.28□□□□□ -1.72
USP16-201ENST00000334352 PGPA6NDG6 321 aa4.28□□□□□ -1.72
USP16-201ENST00000334352 KRTAP29-1A8MX34 341 aaPredicted RBP4.28□□□□□ -1.72
USP16-201ENST00000334352 KRBOX1C9JBD0 128 aa4.28□□□□□ -1.72
USP16-201ENST00000334352 CDC34P49427 236 aaPredicted RBP4.28□□□□□ -1.72
USP16-201ENST00000334352 PRR27Q6MZM9 219 aa4.28□□□□□ -1.72
USP16-201ENST00000334352 Q8N814 137 aa4.28□□□□□ -1.72
USP16-201ENST00000334352 OR4C5Q8NGB2 326 aa4.28□□□□□ -1.72
USP16-201ENST00000334352 CMTM2Q8TAZ6 248 aa4.28□□□□□ -1.72
USP16-201ENST00000334352 MBD3L1Q8WWY6 194 aa4.28□□□□□ -1.72
USP16-201ENST00000334352 RMI2Q96E14 147 aa4.28□□□□□ -1.72
USP16-201ENST00000334352 KRTAP4-5Q9BYR2 181 aa4.28□□□□□ -1.72
USP16-201ENST00000334352 PSG8Q9UQ74 426 aa4.28□□□□□ -1.72
USP16-201ENST00000334352 TRGV4A0A0C4DH28 118 aa4.27□□□□□ -1.73
USP16-201ENST00000334352 RNF222A6NCQ9 220 aa4.27□□□□□ -1.73
USP16-201ENST00000334352 RNASE3P12724 160 aaKnown RBP4.27□□□□□ -1.73
USP16-201ENST00000334352 GCSHP23434 173 aa4.27□□□□□ -1.73
USP16-201ENST00000334352 ATP6V0CP27449 155 aa4.27□□□□□ -1.73
USP16-201ENST00000334352 ELOBQ15370 118 aa4.27□□□□□ -1.73
USP16-201ENST00000334352 ZNF674Q2M3X9 581 aa4.27□□□□□ -1.73
USP16-201ENST00000334352 BLNKQ8WV28 456 aa4.27□□□□□ -1.73
USP16-201ENST00000334352 ZNF479Q96JC4 524 aa4.27□□□□□ -1.73
USP16-201ENST00000334352 SSBP4Q9BWG4 385 aaPredicted RBP4.27□□□□□ -1.73
USP16-201ENST00000334352 TRAV8-3A0A0A6YYJ7 113 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 834.3 ms