RNA–Protein interactions for RNA: ENST00000334082.10

HOMER1-202, Transcript of homer scaffold protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOMER1, Length 5,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER1-202ENST00000334082 MBD3L5A6NJ08 208 aaPredicted RBP17.26■□□□□ 0.35
HOMER1-202ENST00000334082 APOC4P55056 127 aa17.26■□□□□ 0.35
HOMER1-202ENST00000334082 MBD3L2Q8NHZ7 208 aaPredicted RBP17.26■□□□□ 0.35
HOMER1-202ENST00000334082 PRR20EP86478 221 aa17.26■□□□□ 0.35
HOMER1-202ENST00000334082 PRR20CP86479 221 aa17.26■□□□□ 0.35
HOMER1-202ENST00000334082 PRR20DP86480 221 aa17.26■□□□□ 0.35
HOMER1-202ENST00000334082 PRR20BP86481 221 aa17.26■□□□□ 0.35
HOMER1-202ENST00000334082 PRR20AP86496 221 aa17.26■□□□□ 0.35
HOMER1-202ENST00000334082 FOXE3Q13461 319 aa17.26■□□□□ 0.35
HOMER1-202ENST00000334082 C5orf38Q86SI9 138 aa17.26■□□□□ 0.35
HOMER1-202ENST00000334082 IGKV1OR2-108A0A075B7D4 117 aa17.25■□□□□ 0.35
HOMER1-202ENST00000334082 ARTNQ5T4W7 220 aa17.25■□□□□ 0.35
HOMER1-202ENST00000334082 DOCK11Q5JSL3 2073 aa17.25■□□□□ 0.35
HOMER1-202ENST00000334082 IGKV2D-24A0A075B6R9 120 aa17.25■□□□□ 0.35
HOMER1-202ENST00000334082 LGALS9O00182 355 aa17.25■□□□□ 0.35
HOMER1-202ENST00000334082 HIGD1BQ9P298 99 aa17.25■□□□□ 0.35
HOMER1-202ENST00000334082 EP300Q09472 2414 aaPredicted RBP17.25■□□□□ 0.35
HOMER1-202ENST00000334082 IGHV7-4-1A0A0J9YVY3 117 aa17.25■□□□□ 0.35
HOMER1-202ENST00000334082 JMJD7-PLA2G4BH0Y9G9 81 aa17.24■□□□□ 0.35
HOMER1-202ENST00000334082 FHL1Q13642 323 aa17.24■□□□□ 0.35
HOMER1-202ENST00000334082 BRCA1P38398 1863 aaKnown RBP17.24■□□□□ 0.35
HOMER1-202ENST00000334082 PDCD11Q14690 1871 aaKnown RBP17.24■□□□□ 0.35
HOMER1-202ENST00000334082 BUB3O43684 328 aa17.24■□□□□ 0.35
HOMER1-202ENST00000334082 RPL18AQ02543 176 aaKnown RBP17.24■□□□□ 0.35
HOMER1-202ENST00000334082 E9PQ18 207 aa17.24■□□□□ 0.35
HOMER1-202ENST00000334082 ATP5G1P05496 136 aa17.24■□□□□ 0.35
HOMER1-202ENST00000334082 SBF2Q86WG5 1849 aa17.24■□□□□ 0.35
HOMER1-202ENST00000334082 Q6ZQT7 251 aa17.24■□□□□ 0.35
HOMER1-202ENST00000334082 SEC61GP60059 68 aa17.24■□□□□ 0.35
HOMER1-202ENST00000334082 RNF183Q96D59 192 aa17.23■□□□□ 0.35
HOMER1-202ENST00000334082 E7EQL1 145 aa17.23■□□□□ 0.35
HOMER1-202ENST00000334082 RPL39LQ96EH5 51 aaKnown RBP17.23■□□□□ 0.35
HOMER1-202ENST00000334082 U3KQE9 123 aa17.23■□□□□ 0.35
HOMER1-202ENST00000334082 RBAKDNA6NC62 111 aa17.23■□□□□ 0.35
HOMER1-202ENST00000334082 C1orf147Q96MC9 270 aaPredicted RBP17.23■□□□□ 0.35
HOMER1-202ENST00000334082 HIST2H2BCQ6DN03 193 aa17.23■□□□□ 0.35
HOMER1-202ENST00000334082 CACNA1GO43497 2377 aa17.22■□□□□ 0.35
HOMER1-202ENST00000334082 FANCMQ8IYD8 2048 aa17.22■□□□□ 0.35
HOMER1-202ENST00000334082 CLEC2BQ92478 149 aa17.22■□□□□ 0.35
HOMER1-202ENST00000334082 IGHV1-69P01742 117 aa17.22■□□□□ 0.35
HOMER1-202ENST00000334082 CRIPAKQ8N1N5 446 aa17.21■□□□□ 0.35
HOMER1-202ENST00000334082 Q8TCH9 128 aa17.21■□□□□ 0.35
HOMER1-202ENST00000334082 MPLKIPQ8TAP9 179 aa17.21■□□□□ 0.35
HOMER1-202ENST00000334082 H3BT86 120 aa17.21■□□□□ 0.35
HOMER1-202ENST00000334082 ZNF491Q8N8L2 437 aa17.21■□□□□ 0.35
HOMER1-202ENST00000334082 NOP10Q9NPE3 64 aaKnown RBP17.21■□□□□ 0.35
HOMER1-202ENST00000334082 CD59P13987 128 aa17.21■□□□□ 0.34
HOMER1-202ENST00000334082 LINC00311Q8N616 119 aa17.2■□□□□ 0.34
HOMER1-202ENST00000334082 AGPAT4-IT1Q9H0P7 198 aa17.2■□□□□ 0.34
HOMER1-202ENST00000334082 A0A0J9YXV3 536 aa17.2■□□□□ 0.34
HOMER1-202ENST00000334082 MSMBP08118 114 aa17.19■□□□□ 0.34
HOMER1-202ENST00000334082 DIDO1Q9BTC0 2240 aaKnown RBP17.19■□□□□ 0.34
HOMER1-202ENST00000334082 LECT2O14960 151 aa17.19■□□□□ 0.34
HOMER1-202ENST00000334082 IL15RAQ13261 267 aa17.19■□□□□ 0.34
HOMER1-202ENST00000334082 DAND5Q8N907 189 aa17.19■□□□□ 0.34
HOMER1-202ENST00000334082 ARID2Q68CP9 1835 aa17.19■□□□□ 0.34
HOMER1-202ENST00000334082 A0A0U1RQV1 116 aa17.19■□□□□ 0.34
HOMER1-202ENST00000334082 V9GYY9 64 aa17.19■□□□□ 0.34
HOMER1-202ENST00000334082 A0A0J9YY99 117 aa17.19■□□□□ 0.34
HOMER1-202ENST00000334082 Q71RC1 249 aaPredicted RBP17.19■□□□□ 0.34
HOMER1-202ENST00000334082 GATA4P43694 442 aa17.18■□□□□ 0.34
HOMER1-202ENST00000334082 HEATR1Q9H583 2144 aaKnown RBP17.18■□□□□ 0.34
HOMER1-202ENST00000334082 Q6ZUT4 128 aa17.18■□□□□ 0.34
HOMER1-202ENST00000334082 SPRY2O43597 315 aa17.18■□□□□ 0.34
HOMER1-202ENST00000334082 C15orf65H3BRN8 121 aa17.18■□□□□ 0.34
HOMER1-202ENST00000334082 HIGD2BQ4VC39 106 aa17.17■□□□□ 0.34
HOMER1-202ENST00000334082 NCR3O14931 201 aa17.17■□□□□ 0.34
HOMER1-202ENST00000334082 TTTY13Q9BZ97 58 aa17.17■□□□□ 0.34
HOMER1-202ENST00000334082 CAMK2N2Q96S95 79 aa17.17■□□□□ 0.34
HOMER1-202ENST00000334082 TRBV12-3P01733 135 aa17.17■□□□□ 0.34
HOMER1-202ENST00000334082 GATA3P23771 443 aa17.17■□□□□ 0.34
HOMER1-202ENST00000334082 NYNRINQ9P2P1 1898 aaKnown RBP17.17■□□□□ 0.34
HOMER1-202ENST00000334082 ETV2O00321 342 aaPredicted RBP17.16■□□□□ 0.34
HOMER1-202ENST00000334082 LINC00643Q86TS7 51 aa17.16■□□□□ 0.34
HOMER1-202ENST00000334082 LOC285556D6RIA3 1793 aa17.16■□□□□ 0.34
HOMER1-202ENST00000334082 PKIGQ9Y2B9 76 aa17.16■□□□□ 0.34
HOMER1-202ENST00000334082 NDUFV3P56181 108 aaKnown RBP17.15■□□□□ 0.34
HOMER1-202ENST00000334082 PTH2Q96A98 100 aa17.15■□□□□ 0.34
HOMER1-202ENST00000334082 TIMM17AQ99595 171 aa17.15■□□□□ 0.34
HOMER1-202ENST00000334082 GNLYP22749 145 aa17.15■□□□□ 0.34
HOMER1-202ENST00000334082 LOXP28300 417 aaPredicted RBP17.15■□□□□ 0.34
HOMER1-202ENST00000334082 ZNF503Q96F45 646 aa17.14■□□□□ 0.34
HOMER1-202ENST00000334082 LENEPQ9Y5L5 61 aa17.14■□□□□ 0.34
HOMER1-202ENST00000334082 FAM240AA0A1B0GVK7 77 aa17.14■□□□□ 0.33
HOMER1-202ENST00000334082 TIRAPP58753 221 aa17.14■□□□□ 0.33
HOMER1-202ENST00000334082 TRAV23DV6A0A075B6W5 121 aa17.13■□□□□ 0.33
HOMER1-202ENST00000334082 C9orf47Q6ZRZ4 202 aa17.13■□□□□ 0.33
HOMER1-202ENST00000334082 DIAPH2-AS1Q14236 149 aa17.13■□□□□ 0.33
HOMER1-202ENST00000334082 Q6ZR03 302 aa17.13■□□□□ 0.33
HOMER1-202ENST00000334082 GREB1LQ9C091 1923 aaPredicted RBP17.13■□□□□ 0.33
HOMER1-202ENST00000334082 COX7A2LO14548 114 aa17.13■□□□□ 0.33
HOMER1-202ENST00000334082 WDR90Q96KV7 1748 aa17.13■□□□□ 0.33
HOMER1-202ENST00000334082 Q9HAA7 133 aa17.13■□□□□ 0.33
HOMER1-202ENST00000334082 FAM236DA0A1B0GTK5 79 aa17.13■□□□□ 0.33
HOMER1-202ENST00000334082 FAM236CP0DP71 79 aa17.13■□□□□ 0.33
HOMER1-202ENST00000334082 E9PLD3 99 aa17.12■□□□□ 0.33
HOMER1-202ENST00000334082 UPK3BQ9BT76 320 aa17.12■□□□□ 0.33
HOMER1-202ENST00000334082 RNF223E7ERA6 249 aa17.11■□□□□ 0.33
HOMER1-202ENST00000334082 UQCRQO14949 82 aa17.11■□□□□ 0.33
HOMER1-202ENST00000334082 TMEM256-PLSCR3K7ERE1 68 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms