RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 RPL13AP40429 203 aaKnown RBP7.67□□□□□ -1.18
CSGALNACT1-201ENST00000332246 SPINK13Q1W4C9 94 aa7.67□□□□□ -1.18
CSGALNACT1-201ENST00000332246 IGFL3Q6UXB1 125 aa7.67□□□□□ -1.18
CSGALNACT1-201ENST00000332246 LINC00311Q8N616 119 aa7.67□□□□□ -1.18
CSGALNACT1-201ENST00000332246 DUX3Q96PT4 197 aa7.67□□□□□ -1.18
CSGALNACT1-201ENST00000332246 GEMIN7Q9H840 131 aaKnown RBP7.67□□□□□ -1.18
CSGALNACT1-201ENST00000332246 ATMQ13315 3056 aa7.67□□□□□ -1.18
CSGALNACT1-201ENST00000332246 ADAMTS20P59510 1910 aa7.67□□□□□ -1.18
CSGALNACT1-201ENST00000332246 AGRNO00468 2067 aa7.67□□□□□ -1.18
CSGALNACT1-201ENST00000332246 SUMO2P61956 95 aaKnown RBP7.67□□□□□ -1.18
CSGALNACT1-201ENST00000332246 ANXA2RQ3ZCQ2 193 aa7.67□□□□□ -1.18
CSGALNACT1-201ENST00000332246 GAGE13Q4V321 117 aa7.67□□□□□ -1.18
CSGALNACT1-201ENST00000332246 HIST2H2BDQ6DRA6 164 aa7.67□□□□□ -1.18
CSGALNACT1-201ENST00000332246 KLHL30-AS1Q8NEE0 82 aa7.67□□□□□ -1.18
CSGALNACT1-201ENST00000332246 OR9G4Q8NGQ1 327 aa7.67□□□□□ -1.18
CSGALNACT1-201ENST00000332246 RPL39LQ96EH5 51 aaKnown RBP7.67□□□□□ -1.18
CSGALNACT1-201ENST00000332246 MRAP2Q96G30 205 aa7.67□□□□□ -1.18
CSGALNACT1-201ENST00000332246 GFRA4Q9GZZ7 299 aa7.67□□□□□ -1.18
CSGALNACT1-201ENST00000332246 KALRNO60229 2985 aa7.66□□□□□ -1.18
CSGALNACT1-201ENST00000332246 GAS8-AS1O95177 125 aa7.66□□□□□ -1.18
CSGALNACT1-201ENST00000332246 SNRPD3P62318 126 aaKnown RBP7.66□□□□□ -1.18
CSGALNACT1-201ENST00000332246 IGFL2Q6UWQ7 119 aa7.66□□□□□ -1.18
CSGALNACT1-201ENST00000332246 IGLV1-47P01700 117 aa7.66□□□□□ -1.18
CSGALNACT1-201ENST00000332246 CTSGP08311 255 aa7.66□□□□□ -1.18
CSGALNACT1-201ENST00000332246 CT83Q5H943 113 aa7.66□□□□□ -1.18
CSGALNACT1-201ENST00000332246 IGHV3-16A0A0C4DH30 117 aa7.66□□□□□ -1.18
CSGALNACT1-201ENST00000332246 FXYD2P54710 66 aa7.66□□□□□ -1.18
CSGALNACT1-201ENST00000332246 SYNJ2BPP57105 145 aa7.66□□□□□ -1.18
CSGALNACT1-201ENST00000332246 BLCAPP62952 87 aa7.66□□□□□ -1.18
CSGALNACT1-201ENST00000332246 GAGE1Q13065 139 aa7.66□□□□□ -1.18
CSGALNACT1-201ENST00000332246 C2orf66Q6UXQ4 117 aa7.66□□□□□ -1.18
CSGALNACT1-201ENST00000332246 SPXQ9BT56 116 aa7.66□□□□□ -1.18
CSGALNACT1-201ENST00000332246 MEIG1Q5JSS6 88 aa7.65□□□□□ -1.18
CSGALNACT1-201ENST00000332246 LYPD1Q8N2G4 141 aa7.65□□□□□ -1.18
CSGALNACT1-201ENST00000332246 VCX2Q9H322 139 aa7.65□□□□□ -1.18
CSGALNACT1-201ENST00000332246 LINC01549A6NIU2 74 aa7.65□□□□□ -1.18
CSGALNACT1-201ENST00000332246 ZFP36P26651 326 aaKnown RBP7.65□□□□□ -1.18
CSGALNACT1-201ENST00000332246 KLF5Q13887 457 aaPredicted RBP7.65□□□□□ -1.18
CSGALNACT1-201ENST00000332246 DEFB125Q8N687 156 aa7.65□□□□□ -1.18
CSGALNACT1-201ENST00000332246 UBE2E2Q96LR5 201 aa7.65□□□□□ -1.18
CSGALNACT1-201ENST00000332246 TNFRSF18Q9Y5U5 241 aa7.65□□□□□ -1.18
CSGALNACT1-201ENST00000332246 TRAV8-2A0A0B4J237 113 aa7.65□□□□□ -1.19
CSGALNACT1-201ENST00000332246 IGF1P05019 195 aa7.65□□□□□ -1.19
CSGALNACT1-201ENST00000332246 HLA-DRB4P13762 266 aa7.65□□□□□ -1.19
CSGALNACT1-201ENST00000332246 CR1LQ2VPA4 569 aa7.65□□□□□ -1.19
CSGALNACT1-201ENST00000332246 Q6ZQT7 251 aa7.65□□□□□ -1.19
CSGALNACT1-201ENST00000332246 SYT8Q8NBV8 401 aa7.65□□□□□ -1.19
CSGALNACT1-201ENST00000332246 LINC01587Q99440 93 aa7.65□□□□□ -1.19
CSGALNACT1-201ENST00000332246 TSSC4Q9Y5U2 329 aaPredicted RBP7.65□□□□□ -1.19
CSGALNACT1-201ENST00000332246 HLA-DRB4X5D2U9 266 aa7.65□□□□□ -1.19
CSGALNACT1-201ENST00000332246 IGHV7-81A0A0B4J1V7 117 aa7.64□□□□□ -1.19
CSGALNACT1-201ENST00000332246 C9orf118A6NHY6 69 aa7.64□□□□□ -1.19
CSGALNACT1-201ENST00000332246 HOXB4P17483 251 aaPredicted RBP7.64□□□□□ -1.19
CSGALNACT1-201ENST00000332246 NCOR1P1Q9H4R4 102 aa7.64□□□□□ -1.19
CSGALNACT1-201ENST00000332246 IGHV3-38A0A0C4DH36 116 aa7.64□□□□□ -1.19
CSGALNACT1-201ENST00000332246 IGHV2-70DA0A0C4DH43 119 aa7.64□□□□□ -1.19
CSGALNACT1-201ENST00000332246 CRIP1P50238 77 aa7.64□□□□□ -1.19
CSGALNACT1-201ENST00000332246 UCNP55089 124 aa7.64□□□□□ -1.19
CSGALNACT1-201ENST00000332246 LYRM7Q5U5X0 104 aa7.64□□□□□ -1.19
CSGALNACT1-201ENST00000332246 Q8NA96 180 aa7.64□□□□□ -1.19
CSGALNACT1-201ENST00000332246 SRSF8Q9BRL6 282 aaKnown RBP7.64□□□□□ -1.19
CSGALNACT1-201ENST00000332246 KAAG1Q9UBP8 84 aa7.64□□□□□ -1.19
CSGALNACT1-201ENST00000332246 FANCD2OSQ96PS1 177 aa7.64□□□□□ -1.19
CSGALNACT1-201ENST00000332246 JPT2Q9H910 190 aa7.64□□□□□ -1.19
CSGALNACT1-201ENST00000332246 TP53TG1Q9Y2A0 90 aa7.64□□□□□ -1.19
CSGALNACT1-201ENST00000332246 K7ENP7 123 aa7.63□□□□□ -1.19
CSGALNACT1-201ENST00000332246 ESDP10768 282 aa7.63□□□□□ -1.19
CSGALNACT1-201ENST00000332246 TEX48A0A1B0GUV7 120 aa7.63□□□□□ -1.19
CSGALNACT1-201ENST00000332246 C19orf71A6NCJ1 209 aa7.63□□□□□ -1.19
CSGALNACT1-201ENST00000332246 TRBV12-3P01733 135 aa7.63□□□□□ -1.19
CSGALNACT1-201ENST00000332246 PDE6HQ13956 83 aa7.63□□□□□ -1.19
CSGALNACT1-201ENST00000332246 ORMDL2Q53FV1 153 aa7.63□□□□□ -1.19
CSGALNACT1-201ENST00000332246 SIGMAR1Q99720 223 aa7.63□□□□□ -1.19
CSGALNACT1-201ENST00000332246 RNF5Q99942 180 aa7.63□□□□□ -1.19
CSGALNACT1-201ENST00000332246 TMEM14CQ9P0S9 112 aa7.63□□□□□ -1.19
CSGALNACT1-201ENST00000332246 MOB4Q9Y3A3 225 aa7.63□□□□□ -1.19
CSGALNACT1-201ENST00000332246 ZNF462Q96JM2 2506 aa7.63□□□□□ -1.19
CSGALNACT1-201ENST00000332246 TRBV25-1A0A075B6N4 114 aa7.63□□□□□ -1.19
CSGALNACT1-201ENST00000332246 PRADC1Q9BSG0 188 aa7.63□□□□□ -1.19
CSGALNACT1-201ENST00000332246 DPH3P1Q9H4G8 78 aa7.63□□□□□ -1.19
CSGALNACT1-201ENST00000332246 SCRT2Q9NQ03 307 aa7.63□□□□□ -1.19
CSGALNACT1-201ENST00000332246 CTRLP40313 264 aa7.62□□□□□ -1.19
CSGALNACT1-201ENST00000332246 KLF12Q9Y4X4 402 aa7.62□□□□□ -1.19
CSGALNACT1-201ENST00000332246 DCHS1Q96JQ0 3298 aa7.62□□□□□ -1.19
CSGALNACT1-201ENST00000332246 H7C1H1 209 aa7.62□□□□□ -1.19
CSGALNACT1-201ENST00000332246 PAX2Q02962 417 aa7.62□□□□□ -1.19
CSGALNACT1-201ENST00000332246 WFDC2Q14508 124 aa7.62□□□□□ -1.19
CSGALNACT1-201ENST00000332246 MLST8Q9BVC4 326 aa7.62□□□□□ -1.19
CSGALNACT1-201ENST00000332246 ASPMQ8IZT6 3477 aa7.62□□□□□ -1.19
CSGALNACT1-201ENST00000332246 A0A1B0GXF2 115 aa7.62□□□□□ -1.19
CSGALNACT1-201ENST00000332246 M0R1W7 72 aa7.62□□□□□ -1.19
CSGALNACT1-201ENST00000332246 CD28P10747 220 aa7.62□□□□□ -1.19
CSGALNACT1-201ENST00000332246 LGALS9BQ3B8N2 356 aa7.62□□□□□ -1.19
CSGALNACT1-201ENST00000332246 LINC01545Q5VT33 79 aa7.62□□□□□ -1.19
CSGALNACT1-201ENST00000332246 LGALS9CQ6DKI2 356 aa7.62□□□□□ -1.19
CSGALNACT1-201ENST00000332246 TACC2O95359 2948 aa7.62□□□□□ -1.19
CSGALNACT1-201ENST00000332246 A0A1W2PPM0 123 aa7.61□□□□□ -1.19
CSGALNACT1-201ENST00000332246 TCF15Q12870 199 aa7.61□□□□□ -1.19
CSGALNACT1-201ENST00000332246 OR5A1Q8NGJ0 315 aa7.61□□□□□ -1.19
CSGALNACT1-201ENST00000332246 SPOCK3Q9BQ16 436 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms