RNA–Protein interactions for RNA: ENST00000332175.12

PTPRM-201, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRM, Length 6,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-201ENST00000332175 UBL5Q9BZL1 73 aa17.55■□□□□ 0.4
PTPRM-201ENST00000332175 ESM1Q9NQ30 184 aa17.55■□□□□ 0.4
PTPRM-201ENST00000332175 CENPVL3A0A0U1RRI6 287 aa17.55■□□□□ 0.4
PTPRM-201ENST00000332175 hADV29S1A0JD25 119 aa17.55■□□□□ 0.4
PTPRM-201ENST00000332175 LGALS9BQ3B8N2 356 aa17.55■□□□□ 0.4
PTPRM-201ENST00000332175 LGALS9CQ6DKI2 356 aa17.55■□□□□ 0.4
PTPRM-201ENST00000332175 PIFOQ8TCI5 191 aa17.55■□□□□ 0.4
PTPRM-201ENST00000332175 C9orf118A6NHY6 69 aa17.54■□□□□ 0.4
PTPRM-201ENST00000332175 TRAV13-2A0A0B4J235 113 aa17.54■□□□□ 0.4
PTPRM-201ENST00000332175 GP9P14770 177 aa17.54■□□□□ 0.4
PTPRM-201ENST00000332175 C9orf66Q5T8R8 295 aa17.54■□□□□ 0.4
PTPRM-201ENST00000332175 BLCAPP62952 87 aa17.53■□□□□ 0.4
PTPRM-201ENST00000332175 PYGO2Q9BRQ0 406 aa17.53■□□□□ 0.4
PTPRM-201ENST00000332175 IGHV3-30P01768 117 aa17.53■□□□□ 0.4
PTPRM-201ENST00000332175 IGHV3-33P01772 117 aa17.53■□□□□ 0.4
PTPRM-201ENST00000332175 IGHV3-30-3P0DP02 117 aa17.53■□□□□ 0.4
PTPRM-201ENST00000332175 IGHV3-30-5P0DP03 117 aa17.53■□□□□ 0.4
PTPRM-201ENST00000332175 F8VRH5 84 aa17.53■□□□□ 0.4
PTPRM-201ENST00000332175 IGLL1P15814 213 aa17.53■□□□□ 0.4
PTPRM-201ENST00000332175 CARD19Q96LW7 228 aa17.53■□□□□ 0.4
PTPRM-201ENST00000332175 USF3Q68DE3 2245 aa17.53■□□□□ 0.4
PTPRM-201ENST00000332175 PLXNA2O75051 1894 aa17.52■□□□□ 0.4
PTPRM-201ENST00000332175 C20orf78Q9BR46 151 aa17.52■□□□□ 0.4
PTPRM-201ENST00000332175 SPTBN1Q01082 2364 aaKnown RBP17.52■□□□□ 0.4
PTPRM-201ENST00000332175 IGLV10-54A0A075B6I4 117 aa17.52■□□□□ 0.4
PTPRM-201ENST00000332175 COX8AP10176 69 aa17.52■□□□□ 0.4
PTPRM-201ENST00000332175 PRO1854Q9UHT4 67 aa17.52■□□□□ 0.39
PTPRM-201ENST00000332175 NCOR1O75376 2440 aa17.52■□□□□ 0.39
PTPRM-201ENST00000332175 IGHG4P01861 327 aa17.52■□□□□ 0.39
PTPRM-201ENST00000332175 C9orf153Q5TBE3 101 aa17.52■□□□□ 0.39
PTPRM-201ENST00000332175 TRBV20-1A0A075B6N2 111 aa17.51■□□□□ 0.39
PTPRM-201ENST00000332175 IGLV3-1P01715 115 aa17.51■□□□□ 0.39
PTPRM-201ENST00000332175 ACACAQ13085 2346 aa17.51■□□□□ 0.39
PTPRM-201ENST00000332175 C5orf38Q86SI9 138 aa17.51■□□□□ 0.39
PTPRM-201ENST00000332175 CADP27708 2225 aa17.51■□□□□ 0.39
PTPRM-201ENST00000332175 GATA1P15976 413 aaPredicted RBP17.51■□□□□ 0.39
PTPRM-201ENST00000332175 MRPL52Q86TS9 123 aaKnown RBP17.51■□□□□ 0.39
PTPRM-201ENST00000332175 PRR20EP86478 221 aa17.51■□□□□ 0.39
PTPRM-201ENST00000332175 PRR20CP86479 221 aa17.51■□□□□ 0.39
PTPRM-201ENST00000332175 PRR20DP86480 221 aa17.51■□□□□ 0.39
PTPRM-201ENST00000332175 PRR20BP86481 221 aa17.51■□□□□ 0.39
PTPRM-201ENST00000332175 PRR20AP86496 221 aa17.51■□□□□ 0.39
PTPRM-201ENST00000332175 AJUBAQ96IF1 538 aa17.51■□□□□ 0.39
PTPRM-201ENST00000332175 GYPEP15421 78 aa17.5■□□□□ 0.39
PTPRM-201ENST00000332175 MAJINQ3KP22 176 aa17.5■□□□□ 0.39
PTPRM-201ENST00000332175 C20orf144Q9BQM9 153 aa17.5■□□□□ 0.39
PTPRM-201ENST00000332175 NLRC5Q86WI3 1866 aa17.5■□□□□ 0.39
PTPRM-201ENST00000332175 SRSF2Q01130 221 aaKnown RBP17.49■□□□□ 0.39
PTPRM-201ENST00000332175 BUB3O43684 328 aa17.49■□□□□ 0.39
PTPRM-201ENST00000332175 ZNF407Q9C0G0 2248 aa17.49■□□□□ 0.39
PTPRM-201ENST00000332175 BOD1L2Q8IYS8 172 aa17.49■□□□□ 0.39
PTPRM-201ENST00000332175 Q9H8V8 135 aa17.49■□□□□ 0.39
PTPRM-201ENST00000332175 IGLC2P0DOY2 106 aa17.48■□□□□ 0.39
PTPRM-201ENST00000332175 IGLC3P0DOY3 106 aa17.48■□□□□ 0.39
PTPRM-201ENST00000332175 DOPEY2Q9Y3R5 2298 aa17.48■□□□□ 0.39
PTPRM-201ENST00000332175 IGHV7-81A0A0B4J1V7 117 aa17.48■□□□□ 0.39
PTPRM-201ENST00000332175 RS1O15537 224 aa17.48■□□□□ 0.39
PTPRM-201ENST00000332175 RPL39LQ96EH5 51 aaKnown RBP17.48■□□□□ 0.39
PTPRM-201ENST00000332175 C1orf43Q9BWL3 253 aa17.48■□□□□ 0.39
PTPRM-201ENST00000332175 C8orf31Q8N9H6 132 aa17.48■□□□□ 0.39
PTPRM-201ENST00000332175 FGF23Q9GZV9 251 aaPredicted RBP17.48■□□□□ 0.39
PTPRM-201ENST00000332175 BVES-AS1Q5T3Y7 98 aa17.47■□□□□ 0.39
PTPRM-201ENST00000332175 POU2AF1Q16633 256 aa17.46■□□□□ 0.39
PTPRM-201ENST00000332175 TANC1Q9C0D5 1861 aa17.46■□□□□ 0.38
PTPRM-201ENST00000332175 IGHV4OR15-8A0A075B7B6 117 aa17.46■□□□□ 0.38
PTPRM-201ENST00000332175 A0A087WW49 117 aa17.46■□□□□ 0.38
PTPRM-201ENST00000332175 ADORA2A-AS1P86434 159 aa17.46■□□□□ 0.38
PTPRM-201ENST00000332175 C11orf52Q96A22 123 aa17.45■□□□□ 0.38
PTPRM-201ENST00000332175 C16orf74Q96GX8 76 aa17.45■□□□□ 0.38
PTPRM-201ENST00000332175 WIPF2Q8TF74 440 aaPredicted RBP17.45■□□□□ 0.38
PTPRM-201ENST00000332175 PPDPFLQ8WWR9 84 aa17.45■□□□□ 0.38
PTPRM-201ENST00000332175 NPBQ8NG41 125 aa17.45■□□□□ 0.38
PTPRM-201ENST00000332175 DOCK10Q96BY6 2186 aa17.45■□□□□ 0.38
PTPRM-201ENST00000332175 ICOSQ9Y6W8 199 aa17.45■□□□□ 0.38
PTPRM-201ENST00000332175 K7EQD1 137 aa17.44■□□□□ 0.38
PTPRM-201ENST00000332175 RBAKDNA6NC62 111 aa17.44■□□□□ 0.38
PTPRM-201ENST00000332175 ETDBQ3ZM63 59 aa17.44■□□□□ 0.38
PTPRM-201ENST00000332175 UTF1Q5T230 341 aa17.44■□□□□ 0.38
PTPRM-201ENST00000332175 KMT2EQ8IZD2 1858 aa17.44■□□□□ 0.38
PTPRM-201ENST00000332175 SLC25A29Q8N8R3 303 aa17.44■□□□□ 0.38
PTPRM-201ENST00000332175 F8W735 103 aaPredicted RBP17.44■□□□□ 0.38
PTPRM-201ENST00000332175 DOCK11Q5JSL3 2073 aa17.43■□□□□ 0.38
PTPRM-201ENST00000332175 ZNF493Q6ZR52 646 aa17.43■□□□□ 0.38
PTPRM-201ENST00000332175 TRAV4A0A0B4J268 109 aa17.43■□□□□ 0.38
PTPRM-201ENST00000332175 ROS1P08922 2347 aa17.43■□□□□ 0.38
PTPRM-201ENST00000332175 PKDREJQ9NTG1 2253 aa17.43■□□□□ 0.38
PTPRM-201ENST00000332175 H3BMG7 143 aa17.43■□□□□ 0.38
PTPRM-201ENST00000332175 DEFB4AO15263 64 aa17.43■□□□□ 0.38
PTPRM-201ENST00000332175 HEATR5AQ86XA9 2040 aa17.43■□□□□ 0.38
PTPRM-201ENST00000332175 DOCK9Q9BZ29 2069 aa17.42■□□□□ 0.38
PTPRM-201ENST00000332175 I3L2K1 104 aa17.42■□□□□ 0.38
PTPRM-201ENST00000332175 CAMK2N2Q96S95 79 aa17.42■□□□□ 0.38
PTPRM-201ENST00000332175 K7EP34 96 aa17.42■□□□□ 0.38
PTPRM-201ENST00000332175 A0A1W2PPM0 123 aa17.41■□□□□ 0.38
PTPRM-201ENST00000332175 ABCA4P78363 2273 aa17.41■□□□□ 0.38
PTPRM-201ENST00000332175 ATP6V0E2Q8NHE4 81 aa17.41■□□□□ 0.38
PTPRM-201ENST00000332175 C10orf105Q8TEF2 133 aa17.41■□□□□ 0.38
PTPRM-201ENST00000332175 SPART-AS1P0CW21 52 aa17.41■□□□□ 0.38
PTPRM-201ENST00000332175 IGFL2Q6UWQ7 119 aa17.41■□□□□ 0.38
PTPRM-201ENST00000332175 AMTNQ6UX39 209 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms