RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 CCL18P55774 89 aa13.08□□□□□ -0.31
PTCH1-201ENST00000331920 SPRY2O43597 315 aa13.08□□□□□ -0.32
PTCH1-201ENST00000331920 GYPEP15421 78 aa13.08□□□□□ -0.32
PTCH1-201ENST00000331920 CYTL1Q9NRR1 136 aa13.08□□□□□ -0.32
PTCH1-201ENST00000331920 AHDC1Q5TGY3 1603 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-201ENST00000331920 LINC00114Q6XXX2 140 aa13.08□□□□□ -0.32
PTCH1-201ENST00000331920 DEFB136Q30KP8 78 aa13.08□□□□□ -0.32
PTCH1-201ENST00000331920 TMEM61Q8N0U2 210 aa13.08□□□□□ -0.32
PTCH1-201ENST00000331920 DAND5Q8N907 189 aa13.08□□□□□ -0.32
PTCH1-201ENST00000331920 A0A1B0GW64 132 aa13.08□□□□□ -0.32
PTCH1-201ENST00000331920 ZNF493Q6ZR52 646 aa13.07□□□□□ -0.32
PTCH1-201ENST00000331920 GGNQ86UU5 652 aa13.07□□□□□ -0.32
PTCH1-201ENST00000331920 PRSS47A8MTI9 375 aa13.07□□□□□ -0.32
PTCH1-201ENST00000331920 UNQ6494/PRO21346Q6UXR6 183 aa13.07□□□□□ -0.32
PTCH1-201ENST00000331920 APRG1Q8IVJ8 170 aa13.07□□□□□ -0.32
PTCH1-201ENST00000331920 GVINP1Q7Z2Y8 2422 aa13.07□□□□□ -0.32
PTCH1-201ENST00000331920 A0A0J9YWU9 116 aa13.07□□□□□ -0.32
PTCH1-201ENST00000331920 E7EQL1 145 aa13.07□□□□□ -0.32
PTCH1-201ENST00000331920 GFI1Q99684 422 aa13.07□□□□□ -0.32
PTCH1-201ENST00000331920 TICRRQ7Z2Z1 1910 aa13.06□□□□□ -0.32
PTCH1-201ENST00000331920 LTBP4Q8N2S1 1624 aa13.06□□□□□ -0.32
PTCH1-201ENST00000331920 KIAA1549Q9HCM3 1950 aa13.06□□□□□ -0.32
PTCH1-201ENST00000331920 CTSGP08311 255 aa13.06□□□□□ -0.32
PTCH1-201ENST00000331920 IGHV1-69DA0A0B4J2H0 117 aa13.06□□□□□ -0.32
PTCH1-201ENST00000331920 IGHV1-69P01742 117 aa13.06□□□□□ -0.32
PTCH1-201ENST00000331920 SH2D6Q7Z4S9 175 aa13.06□□□□□ -0.32
PTCH1-201ENST00000331920 MRPL55Q7Z7F7 128 aaKnown RBP13.06□□□□□ -0.32
PTCH1-201ENST00000331920 OBSL1O75147 1896 aa13.06□□□□□ -0.32
PTCH1-201ENST00000331920 A0A0B4J2C4 111 aa13.06□□□□□ -0.32
PTCH1-201ENST00000331920 COX7A2LO14548 114 aa13.06□□□□□ -0.32
PTCH1-201ENST00000331920 IGLL1P15814 213 aa13.06□□□□□ -0.32
PTCH1-201ENST00000331920 ZC2HC1AQ96GY0 325 aa13.05□□□□□ -0.32
PTCH1-201ENST00000331920 CR1LQ2VPA4 569 aa13.05□□□□□ -0.32
PTCH1-201ENST00000331920 WFDC11Q8NEX6 87 aa13.05□□□□□ -0.32
PTCH1-201ENST00000331920 C3orf22Q8N5N4 141 aa13.05□□□□□ -0.32
PTCH1-201ENST00000331920 NPYP01303 97 aa13.05□□□□□ -0.32
PTCH1-201ENST00000331920 FAM110AQ9BQ89 295 aa13.05□□□□□ -0.32
PTCH1-201ENST00000331920 PLXNB1O43157 2135 aa13.05□□□□□ -0.32
PTCH1-201ENST00000331920 LYPD6Q86Y78 171 aa13.05□□□□□ -0.32
PTCH1-201ENST00000331920 SND1-IT1Q9HBX3 110 aa13.05□□□□□ -0.32
PTCH1-201ENST00000331920 CFC1BP0CG36 223 aa13.05□□□□□ -0.32
PTCH1-201ENST00000331920 CFC1P0CG37 223 aa13.05□□□□□ -0.32
PTCH1-201ENST00000331920 Q6P435 159 aa13.05□□□□□ -0.32
PTCH1-201ENST00000331920 J3KT08 172 aa13.04□□□□□ -0.32
PTCH1-201ENST00000331920 LTAP01374 205 aa13.04□□□□□ -0.32
PTCH1-201ENST00000331920 A0A0G2JRQ6 117 aa13.04□□□□□ -0.32
PTCH1-201ENST00000331920 NDUFS7O75251 213 aa13.04□□□□□ -0.32
PTCH1-201ENST00000331920 Q6ZWC4 215 aa13.04□□□□□ -0.32
PTCH1-201ENST00000331920 ATOX1O00244 68 aa13.04□□□□□ -0.32
PTCH1-201ENST00000331920 LGALS9BQ3B8N2 356 aa13.04□□□□□ -0.32
PTCH1-201ENST00000331920 LGALS9CQ6DKI2 356 aa13.04□□□□□ -0.32
PTCH1-201ENST00000331920 DEFB125Q8N687 156 aa13.04□□□□□ -0.32
PTCH1-201ENST00000331920 SPANXCQ9NY87 97 aa13.04□□□□□ -0.32
PTCH1-201ENST00000331920 Q0VG73 95 aa13.04□□□□□ -0.32
PTCH1-201ENST00000331920 OPRPNQ99935 248 aaPredicted RBP13.04□□□□□ -0.32
PTCH1-201ENST00000331920 NCOA6Q14686 2063 aaPredicted RBP13.04□□□□□ -0.32
PTCH1-201ENST00000331920 ZFP36L1Q07352 338 aaKnown RBP13.03□□□□□ -0.32
PTCH1-201ENST00000331920 LYPD3O95274 346 aa13.03□□□□□ -0.32
PTCH1-201ENST00000331920 ICOSQ9Y6W8 199 aa13.03□□□□□ -0.32
PTCH1-201ENST00000331920 FNDC10F2Z333 226 aa13.03□□□□□ -0.32
PTCH1-201ENST00000331920 CCL24O00175 119 aa13.03□□□□□ -0.32
PTCH1-201ENST00000331920 GTSF1Q8WW33 167 aa13.03□□□□□ -0.32
PTCH1-201ENST00000331920 TRBV19A0A075B6N1 114 aa13.03□□□□□ -0.32
PTCH1-201ENST00000331920 IGLC7A0M8Q6 106 aa13.03□□□□□ -0.32
PTCH1-201ENST00000331920 CRYGSP22914 178 aa13.03□□□□□ -0.32
PTCH1-201ENST00000331920 IGLV3-9A0A075B6K5 115 aa13.02□□□□□ -0.32
PTCH1-201ENST00000331920 C5orf63A6NC05 138 aa13.02□□□□□ -0.32
PTCH1-201ENST00000331920 GPHB5Q86YW7 130 aa13.02□□□□□ -0.32
PTCH1-201ENST00000331920 PRR25Q96S07 402 aa13.02□□□□□ -0.32
PTCH1-201ENST00000331920 GATA3P23771 443 aa13.02□□□□□ -0.32
PTCH1-201ENST00000331920 NDUFA4O00483 81 aa13.01□□□□□ -0.33
PTCH1-201ENST00000331920 C17orf77Q96MU5 243 aa13.01□□□□□ -0.33
PTCH1-201ENST00000331920 CFPP27918 469 aa13.01□□□□□ -0.33
PTCH1-201ENST00000331920 FAM120AOSQ5T036 256 aa13.01□□□□□ -0.33
PTCH1-201ENST00000331920 HERV-K104P63124 156 aa13.01□□□□□ -0.33
PTCH1-201ENST00000331920 TRBV12-3P01733 135 aa13.01□□□□□ -0.33
PTCH1-201ENST00000331920 SMIM27A0A1W2PRY6 76 aa13.01□□□□□ -0.33
PTCH1-201ENST00000331920 PRR30Q53SZ7 412 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-201ENST00000331920 PIFOQ8TCI5 191 aa13.01□□□□□ -0.33
PTCH1-201ENST00000331920 RNF138Q8WVD3 245 aa13.01□□□□□ -0.33
PTCH1-201ENST00000331920 A0A096LNI7 61 aa13□□□□□ -0.33
PTCH1-201ENST00000331920 ZNF492Q9P255 531 aa13□□□□□ -0.33
PTCH1-201ENST00000331920 RNF144BQ7Z419 303 aa13□□□□□ -0.33
PTCH1-201ENST00000331920 USP17L23D6RBM5 183 aa13□□□□□ -0.33
PTCH1-201ENST00000331920 EIF4EBP2Q13542 120 aaPredicted RBP13□□□□□ -0.33
PTCH1-201ENST00000331920 IGKV2D-26A0A0A0MRZ7 120 aa12.99□□□□□ -0.33
PTCH1-201ENST00000331920 PCP2Q8IVA1 136 aa12.99□□□□□ -0.33
PTCH1-201ENST00000331920 TMEM14BQ9NUH8 114 aa12.99□□□□□ -0.33
PTCH1-201ENST00000331920 C2orf16Q68DN1 1984 aa12.99□□□□□ -0.33
PTCH1-201ENST00000331920 RBAKDNA6NC62 111 aa12.99□□□□□ -0.33
PTCH1-201ENST00000331920 TRAV23DV6A0A075B6W5 121 aa12.99□□□□□ -0.33
PTCH1-201ENST00000331920 RPL39LQ96EH5 51 aaKnown RBP12.99□□□□□ -0.33
PTCH1-201ENST00000331920 CRYGBP07316 175 aa12.99□□□□□ -0.33
PTCH1-201ENST00000331920 VOPP1Q96AW1 172 aa12.99□□□□□ -0.33
PTCH1-201ENST00000331920 DEFB4AO15263 64 aa12.99□□□□□ -0.33
PTCH1-201ENST00000331920 ARHGAP32A7KAX9 2087 aa12.99□□□□□ -0.33
PTCH1-201ENST00000331920 IGHV2-70DA0A0C4DH43 119 aa12.98□□□□□ -0.33
PTCH1-201ENST00000331920 IGHV7-4-1A0A0J9YVY3 117 aa12.98□□□□□ -0.33
PTCH1-201ENST00000331920 TAX1BP3O14907 124 aa12.98□□□□□ -0.33
PTCH1-201ENST00000331920 Q6ZRM9 215 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms