RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 RNF114Q9Y508 228 aa12.67□□□□□ -0.38
DDX41-201ENST00000330503 PEMTQ9UBM1 199 aa12.67□□□□□ -0.38
DDX41-201ENST00000330503 A0A0J9YX75 114 aa12.66□□□□□ -0.38
DDX41-201ENST00000330503 PMCHP20382 165 aa12.66□□□□□ -0.38
DDX41-201ENST00000330503 AMTP48728 403 aa12.66□□□□□ -0.38
DDX41-201ENST00000330503 U3KQK5 164 aa12.66□□□□□ -0.38
DDX41-201ENST00000330503 OTOGQ6ZRI0 2925 aa12.66□□□□□ -0.38
DDX41-201ENST00000330503 NOTCH2Q04721 2471 aa12.66□□□□□ -0.38
DDX41-201ENST00000330503 KLLNB2CW77 178 aa12.65□□□□□ -0.38
DDX41-201ENST00000330503 MRPL51Q4U2R6 128 aaKnown RBP12.65□□□□□ -0.38
DDX41-201ENST00000330503 A0A1W2PRX2 142 aa12.65□□□□□ -0.38
DDX41-201ENST00000330503 RNASEKQ6P5S7 137 aaKnown RBP12.65□□□□□ -0.38
DDX41-201ENST00000330503 CITED2Q99967 270 aaPredicted RBP12.65□□□□□ -0.38
DDX41-201ENST00000330503 TMEM191AQ9H0A3 160 aa12.65□□□□□ -0.38
DDX41-201ENST00000330503 SNAI2O43623 268 aa12.64□□□□□ -0.39
DDX41-201ENST00000330503 ANXA2RQ3ZCQ2 193 aa12.64□□□□□ -0.39
DDX41-201ENST00000330503 DMRTA1Q5VZB9 504 aa12.64□□□□□ -0.39
DDX41-201ENST00000330503 OR10AG1Q8NH19 301 aa12.64□□□□□ -0.39
DDX41-201ENST00000330503 NAGKQ9UJ70 344 aa12.64□□□□□ -0.39
DDX41-201ENST00000330503 OR5AL1P0C617 328 aa12.64□□□□□ -0.39
DDX41-201ENST00000330503 FHL3Q13643 280 aa12.64□□□□□ -0.39
DDX41-201ENST00000330503 RNF185Q96GF1 192 aa12.64□□□□□ -0.39
DDX41-201ENST00000330503 HIVEP2P31629 2446 aa12.63□□□□□ -0.39
DDX41-201ENST00000330503 IGHV4-4A0A075B6R2 117 aa12.62□□□□□ -0.39
DDX41-201ENST00000330503 D6R8Y8 96 aa12.62□□□□□ -0.39
DDX41-201ENST00000330503 DEFB114Q30KQ6 69 aa12.62□□□□□ -0.39
DDX41-201ENST00000330503 ODF3Q96PU9 254 aa12.62□□□□□ -0.39
DDX41-201ENST00000330503 SORL1Q92673 2214 aa12.62□□□□□ -0.39
DDX41-201ENST00000330503 H3BVH4 76 aa12.62□□□□□ -0.39
DDX41-201ENST00000330503 CCL24O00175 119 aa12.62□□□□□ -0.39
DDX41-201ENST00000330503 GNRH2O43555 120 aa12.62□□□□□ -0.39
DDX41-201ENST00000330503 HSBP1O75506 76 aa12.62□□□□□ -0.39
DDX41-201ENST00000330503 NDUFA7O95182 113 aa12.62□□□□□ -0.39
DDX41-201ENST00000330503 SCGB1D1O95968 90 aa12.62□□□□□ -0.39
DDX41-201ENST00000330503 LINC00614P0C842 121 aa12.62□□□□□ -0.39
DDX41-201ENST00000330503 RAB4AP20338 218 aa12.62□□□□□ -0.39
DDX41-201ENST00000330503 S100A12P80511 92 aa12.62□□□□□ -0.39
DDX41-201ENST00000330503 EBLN2Q6P2I7 272 aa12.62□□□□□ -0.39
DDX41-201ENST00000330503 TMEM61Q8N0U2 210 aa12.62□□□□□ -0.39
DDX41-201ENST00000330503 TSSC4Q9Y5U2 329 aaPredicted RBP12.62□□□□□ -0.39
DDX41-201ENST00000330503 IGKV3-20P01619 116 aa12.61□□□□□ -0.39
DDX41-201ENST00000330503 CHCHD1Q96BP2 118 aaKnown RBP12.61□□□□□ -0.39
DDX41-201ENST00000330503 SMKR1H3BMG3 65 aa12.61□□□□□ -0.39
DDX41-201ENST00000330503 SPRY2O43597 315 aa12.61□□□□□ -0.39
DDX41-201ENST00000330503 PRELID3AQ96N28 172 aa12.61□□□□□ -0.39
DDX41-201ENST00000330503 AGRNO00468 2067 aa12.6□□□□□ -0.39
DDX41-201ENST00000330503 TRAV2A0A0B4J234 112 aa12.6□□□□□ -0.39
DDX41-201ENST00000330503 LEPP41159 167 aa12.6□□□□□ -0.39
DDX41-201ENST00000330503 FOXI2Q6ZQN5 318 aa12.6□□□□□ -0.39
DDX41-201ENST00000330503 ORMDL3Q8N138 153 aa12.6□□□□□ -0.39
DDX41-201ENST00000330503 M0R2Z0 102 aa12.59□□□□□ -0.39
DDX41-201ENST00000330503 DUSP14O95147 198 aaKnown RBP12.59□□□□□ -0.39
DDX41-201ENST00000330503 CACNG7P62955 275 aa12.59□□□□□ -0.39
DDX41-201ENST00000330503 PMCHL1Q16048 86 aa12.59□□□□□ -0.39
DDX41-201ENST00000330503 AMTNQ6UX39 209 aa12.59□□□□□ -0.39
DDX41-201ENST00000330503 Q8N976 141 aa12.59□□□□□ -0.39
DDX41-201ENST00000330503 TRAV12-3A0A0B4J271 114 aa12.59□□□□□ -0.39
DDX41-201ENST00000330503 GAS8-AS1O95177 125 aa12.59□□□□□ -0.39
DDX41-201ENST00000330503 EVI2AP22794 236 aa12.59□□□□□ -0.39
DDX41-201ENST00000330503 PROK1P58294 105 aa12.59□□□□□ -0.39
DDX41-201ENST00000330503 DYNLRB2Q8TF09 96 aa12.59□□□□□ -0.39
DDX41-201ENST00000330503 SCRT2Q9NQ03 307 aa12.59□□□□□ -0.39
DDX41-201ENST00000330503 TIMM8BQ9Y5J9 83 aaPredicted RBP12.59□□□□□ -0.39
DDX41-201ENST00000330503 C7orf71A4D174 169 aa12.58□□□□□ -0.4
DDX41-201ENST00000330503 KNCNA6PVL3 124 aa12.58□□□□□ -0.4
DDX41-201ENST00000330503 RNASE3P12724 160 aaKnown RBP12.58□□□□□ -0.4
DDX41-201ENST00000330503 CKS2P33552 79 aa12.58□□□□□ -0.4
DDX41-201ENST00000330503 ASIPP42127 132 aa12.58□□□□□ -0.4
DDX41-201ENST00000330503 DEFB131AP59861 70 aa12.58□□□□□ -0.4
DDX41-201ENST00000330503 KRTDAPP60985 99 aa12.58□□□□□ -0.4
DDX41-201ENST00000330503 CD300EQ496F6 205 aaPredicted RBP12.58□□□□□ -0.4
DDX41-201ENST00000330503 JMJD8Q96S16 334 aa12.58□□□□□ -0.4
DDX41-201ENST00000330503 INAFM1C9JVW0 142 aa12.58□□□□□ -0.4
DDX41-201ENST00000330503 NCR2O95944 276 aa12.58□□□□□ -0.4
DDX41-201ENST00000330503 C3orf79P0CE67 100 aa12.58□□□□□ -0.4
DDX41-201ENST00000330503 SPANXN1Q5VSR9 72 aa12.58□□□□□ -0.4
DDX41-201ENST00000330503 TRAV12-2A0A075B6T6 113 aa12.57□□□□□ -0.4
DDX41-201ENST00000330503 IGHV1-24A0A0C4DH33 117 aa12.57□□□□□ -0.4
DDX41-201ENST00000330503 ADARB2-AS1A8MUL3 147 aa12.57□□□□□ -0.4
DDX41-201ENST00000330503 MED14OSP0DP75 135 aa12.57□□□□□ -0.4
DDX41-201ENST00000330503 SETD2Q9BYW2 2564 aaPredicted RBP12.57□□□□□ -0.4
DDX41-201ENST00000330503 NPYP01303 97 aa12.56□□□□□ -0.4
DDX41-201ENST00000330503 S100A4P26447 101 aaKnown RBP12.56□□□□□ -0.4
DDX41-201ENST00000330503 IFI27P40305 119 aaPredicted RBP12.56□□□□□ -0.4
DDX41-201ENST00000330503 ZNF124Q15973 351 aa12.56□□□□□ -0.4
DDX41-201ENST00000330503 ZNF664Q8N3J9 261 aa12.56□□□□□ -0.4
DDX41-201ENST00000330503 SIGLEC8Q9NYZ4 499 aa12.56□□□□□ -0.4
DDX41-201ENST00000330503 LOC389332A0A1B0GUA5 103 aa12.56□□□□□ -0.4
DDX41-201ENST00000330503 A8MTW9 85 aa12.56□□□□□ -0.4
DDX41-201ENST00000330503 CDKN1BP46527 198 aa12.56□□□□□ -0.4
DDX41-201ENST00000330503 SPINK13Q1W4C9 94 aa12.56□□□□□ -0.4
DDX41-201ENST00000330503 PRSS3P2Q8NHM4 247 aa12.56□□□□□ -0.4
DDX41-201ENST00000330503 ZNF256Q9Y2P7 627 aaPredicted RBP12.56□□□□□ -0.4
DDX41-201ENST00000330503 LINC00587B1AMM8 73 aa12.55□□□□□ -0.4
DDX41-201ENST00000330503 FAM159AQ6UWV7 190 aa12.55□□□□□ -0.4
DDX41-201ENST00000330503 PRO1933Q9H354 126 aa12.55□□□□□ -0.4
DDX41-201ENST00000330503 H3BMM0 161 aa12.55□□□□□ -0.4
DDX41-201ENST00000330503 PPBPP02775 128 aa12.55□□□□□ -0.4
DDX41-201ENST00000330503 GATA1P15976 413 aaPredicted RBP12.55□□□□□ -0.4
DDX41-201ENST00000330503 TSPOP30536 169 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms