RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 GCSHP23434 173 aa16.9■□□□□ 0.3
PPP4R4-202ENST00000328839 PPT1P50897 306 aa16.9■□□□□ 0.3
PPP4R4-202ENST00000328839 TRAV21A0A0B4J279 112 aa16.89■□□□□ 0.29
PPP4R4-202ENST00000328839 INMT-MINDY4F8WBC2 141 aa16.89■□□□□ 0.29
PPP4R4-202ENST00000328839 PET100P0DJ07 73 aa16.89■□□□□ 0.29
PPP4R4-202ENST00000328839 HERC1Q15751 4861 aa16.88■□□□□ 0.29
PPP4R4-202ENST00000328839 SMR3BP02814 79 aaPredicted RBP16.88■□□□□ 0.29
PPP4R4-202ENST00000328839 TYMSP04818 313 aa16.88■□□□□ 0.29
PPP4R4-202ENST00000328839 LINC00299Q6ZSB3 139 aa16.88■□□□□ 0.29
PPP4R4-202ENST00000328839 SH2D6Q7Z4S9 175 aa16.88■□□□□ 0.29
PPP4R4-202ENST00000328839 SDF2L1Q9HCN8 221 aa16.88■□□□□ 0.29
PPP4R4-202ENST00000328839 TREM1Q9NP99 234 aa16.88■□□□□ 0.29
PPP4R4-202ENST00000328839 TRAV8-1A0A0A6YYK1 113 aa16.87■□□□□ 0.29
PPP4R4-202ENST00000328839 UPK1BO75841 260 aa16.87■□□□□ 0.29
PPP4R4-202ENST00000328839 MPC2O95563 127 aa16.87■□□□□ 0.29
PPP4R4-202ENST00000328839 RPL12P30050 165 aaKnown RBP16.87■□□□□ 0.29
PPP4R4-202ENST00000328839 IGHV3-38A0A0C4DH36 116 aa16.86■□□□□ 0.29
PPP4R4-202ENST00000328839 A0A1W2PPV4 95 aa16.86■□□□□ 0.29
PPP4R4-202ENST00000328839 SSNA1O43805 119 aa16.86■□□□□ 0.29
PPP4R4-202ENST00000328839 HAMPP81172 84 aa16.86■□□□□ 0.29
PPP4R4-202ENST00000328839 ACOT6Q3I5F7 207 aaPredicted RBP16.86■□□□□ 0.29
PPP4R4-202ENST00000328839 GATA1P15976 413 aaPredicted RBP16.85■□□□□ 0.29
PPP4R4-202ENST00000328839 GNG5P63218 68 aa16.85■□□□□ 0.29
PPP4R4-202ENST00000328839 PQLC2Q6ZP29 291 aa16.85■□□□□ 0.29
PPP4R4-202ENST00000328839 TVP23CQ96ET8 276 aa16.85■□□□□ 0.29
PPP4R4-202ENST00000328839 KCNS1Q96KK3 526 aa16.85■□□□□ 0.29
PPP4R4-202ENST00000328839 IGLV5-52A0A0A0MRZ9 124 aa16.84■□□□□ 0.29
PPP4R4-202ENST00000328839 FBLL1A6NHQ2 334 aaKnown RBP16.84■□□□□ 0.29
PPP4R4-202ENST00000328839 HMGB3O15347 200 aaKnown RBP16.84■□□□□ 0.29
PPP4R4-202ENST00000328839 ASB13Q8WXK3 278 aa16.84■□□□□ 0.29
PPP4R4-202ENST00000328839 SGK494Q96LW2 274 aa16.84■□□□□ 0.29
PPP4R4-202ENST00000328839 OR10J3Q5JRS4 329 aa16.83■□□□□ 0.28
PPP4R4-202ENST00000328839 Q9HAA7 133 aa16.83■□□□□ 0.28
PPP4R4-202ENST00000328839 FAT1Q14517 4588 aa16.82■□□□□ 0.28
PPP4R4-202ENST00000328839 TRAV8-6A0A0B4J262 113 aa16.82■□□□□ 0.28
PPP4R4-202ENST00000328839 TIRAPP58753 221 aa16.82■□□□□ 0.28
PPP4R4-202ENST00000328839 RAB2AP61019 212 aa16.82■□□□□ 0.28
PPP4R4-202ENST00000328839 IFITM3Q01628 133 aa16.82■□□□□ 0.28
PPP4R4-202ENST00000328839 NDFIP1Q9BT67 221 aa16.82■□□□□ 0.28
PPP4R4-202ENST00000328839 WFDC1Q9HC57 220 aa16.82■□□□□ 0.28
PPP4R4-202ENST00000328839 DMBT1Q9UGM3 2413 aaPredicted RBP16.81■□□□□ 0.28
PPP4R4-202ENST00000328839 PFN1P07737 140 aaKnown RBP16.81■□□□□ 0.28
PPP4R4-202ENST00000328839 ZNF876PQ49A33 203 aa16.81■□□□□ 0.28
PPP4R4-202ENST00000328839 LINC01556Q5JQF7 62 aa16.81■□□□□ 0.28
PPP4R4-202ENST00000328839 SLC25A29Q8N8R3 303 aa16.81■□□□□ 0.28
PPP4R4-202ENST00000328839 PRADC1Q9BSG0 188 aa16.81■□□□□ 0.28
PPP4R4-202ENST00000328839 IGHV3-73A0A0B4J1V6 119 aa16.8■□□□□ 0.28
PPP4R4-202ENST00000328839 ARL6IP6Q8N6S5 226 aa16.8■□□□□ 0.28
PPP4R4-202ENST00000328839 OR10G9Q8NGN4 311 aa16.8■□□□□ 0.28
PPP4R4-202ENST00000328839 OR10G7Q8NGN6 311 aa16.8■□□□□ 0.28
PPP4R4-202ENST00000328839 MARVELD1Q9BSK0 173 aa16.8■□□□□ 0.28
PPP4R4-202ENST00000328839 LRCOL1A6NCL2 159 aa16.79■□□□□ 0.28
PPP4R4-202ENST00000328839 FAM229AH3BQW9 127 aa16.79■□□□□ 0.28
PPP4R4-202ENST00000328839 IGHV3-30P01768 117 aa16.79■□□□□ 0.28
PPP4R4-202ENST00000328839 IGHV3-33P01772 117 aa16.79■□□□□ 0.28
PPP4R4-202ENST00000328839 IGHV3-30-3P0DP02 117 aa16.79■□□□□ 0.28
PPP4R4-202ENST00000328839 IGHV3-30-5P0DP03 117 aa16.79■□□□□ 0.28
PPP4R4-202ENST00000328839 NTN5Q8WTR8 489 aaPredicted RBP16.79■□□□□ 0.28
PPP4R4-202ENST00000328839 VPS13BQ7Z7G8 4022 aa16.79■□□□□ 0.28
PPP4R4-202ENST00000328839 IBA57-AS1B1ANH7 110 aa16.78■□□□□ 0.28
PPP4R4-202ENST00000328839 ARL14EPLP0DKL9 152 aa16.78■□□□□ 0.28
PPP4R4-202ENST00000328839 RHOHQ15669 191 aa16.78■□□□□ 0.28
PPP4R4-202ENST00000328839 CFAP126Q5VTH2 177 aa16.78■□□□□ 0.28
PPP4R4-202ENST00000328839 RS1O15537 224 aa16.76■□□□□ 0.27
PPP4R4-202ENST00000328839 CDC34P49427 236 aaPredicted RBP16.76■□□□□ 0.27
PPP4R4-202ENST00000328839 ZNF80P51504 273 aaPredicted RBP16.76■□□□□ 0.27
PPP4R4-202ENST00000328839 DPPA3Q6W0C5 159 aa16.76■□□□□ 0.27
PPP4R4-202ENST00000328839 Q8N814 137 aa16.76■□□□□ 0.27
PPP4R4-202ENST00000328839 TMEM70Q9BUB7 260 aa16.76■□□□□ 0.27
PPP4R4-202ENST00000328839 BOLA1Q9Y3E2 137 aa16.76■□□□□ 0.27
PPP4R4-202ENST00000328839 SERTM2A0A1B0GWG4 89 aa16.75■□□□□ 0.27
PPP4R4-202ENST00000328839 TRBV6-4A0A1B0GX49 114 aa16.75■□□□□ 0.27
PPP4R4-202ENST00000328839 K7EQM0 130 aa16.75■□□□□ 0.27
PPP4R4-202ENST00000328839 GCGP01275 180 aa16.75■□□□□ 0.27
PPP4R4-202ENST00000328839 Q6ZSN1 163 aa16.75■□□□□ 0.27
PPP4R4-202ENST00000328839 TMEM75Q8N9X5 138 aa16.75■□□□□ 0.27
PPP4R4-202ENST00000328839 C11orf21Q9P2W6 132 aa16.75■□□□□ 0.27
PPP4R4-202ENST00000328839 TAAR5O14804 337 aa16.74■□□□□ 0.27
PPP4R4-202ENST00000328839 CIDEAO60543 219 aa16.74■□□□□ 0.27
PPP4R4-202ENST00000328839 TCRAP04437 139 aa16.74■□□□□ 0.27
PPP4R4-202ENST00000328839 LELP1Q5T871 98 aa16.74■□□□□ 0.27
PPP4R4-202ENST00000328839 C5orf17Q8NAS9 161 aa16.74■□□□□ 0.27
PPP4R4-202ENST00000328839 FLG2Q5D862 2391 aaPredicted RBP16.73■□□□□ 0.27
PPP4R4-202ENST00000328839 ZFP69Q49AA0 526 aa16.73■□□□□ 0.27
PPP4R4-202ENST00000328839 ZNF506Q5JVG8 444 aa16.73■□□□□ 0.27
PPP4R4-202ENST00000328839 PSG8Q9UQ74 426 aa16.73■□□□□ 0.27
PPP4R4-202ENST00000328839 PGPEP1LA6NFU8 196 aa16.72■□□□□ 0.27
PPP4R4-202ENST00000328839 DEFA1P59665 94 aa16.72■□□□□ 0.27
PPP4R4-202ENST00000328839 DEFA3P59666 94 aa16.72■□□□□ 0.27
PPP4R4-202ENST00000328839 HSD17B11Q8NBQ5 300 aa16.72■□□□□ 0.27
PPP4R4-202ENST00000328839 ATP6V0E2Q8NHE4 81 aa16.72■□□□□ 0.27
PPP4R4-202ENST00000328839 C9orf85Q96MD7 179 aa16.72■□□□□ 0.27
PPP4R4-202ENST00000328839 GTSF1LQ9H1H1 148 aa16.72■□□□□ 0.27
PPP4R4-202ENST00000328839 STAG3L2P0CL84 134 aa16.71■□□□□ 0.27
PPP4R4-202ENST00000328839 STAG3L3P0CL85 134 aa16.71■□□□□ 0.27
PPP4R4-202ENST00000328839 PRNTQ86SH4 94 aa16.71■□□□□ 0.27
PPP4R4-202ENST00000328839 SRRM2Q9UQ35 2752 aaKnown RBP16.7■□□□□ 0.26
PPP4R4-202ENST00000328839 MGST1P10620 155 aaKnown RBP16.7■□□□□ 0.26
PPP4R4-202ENST00000328839 GCHFRP30047 84 aa16.7■□□□□ 0.26
PPP4R4-202ENST00000328839 SMUG1Q53HV7 270 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms