RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 CITED1Q99966 193 aa8.9□□□□□ -0.98
COL4A5-201ENST00000328300 P0C879 139 aa8.9□□□□□ -0.98
COL4A5-201ENST00000328300 NPC2P61916 151 aa8.9□□□□□ -0.98
COL4A5-201ENST00000328300 KLF5Q13887 457 aaPredicted RBP8.9□□□□□ -0.98
COL4A5-201ENST00000328300 IGLV2-14P01704 120 aa8.89□□□□□ -0.99
COL4A5-201ENST00000328300 JPT2Q9H910 190 aa8.89□□□□□ -0.99
COL4A5-201ENST00000328300 IGHV1-24A0A0C4DH33 117 aa8.89□□□□□ -0.99
COL4A5-201ENST00000328300 GAGE12JA6NER3 117 aa8.89□□□□□ -0.99
COL4A5-201ENST00000328300 GAGE1Q13065 139 aa8.89□□□□□ -0.99
COL4A5-201ENST00000328300 GAGE4Q13068 117 aa8.89□□□□□ -0.99
COL4A5-201ENST00000328300 GAGE5Q13069 117 aa8.89□□□□□ -0.99
COL4A5-201ENST00000328300 DYNAPQ8N1N2 210 aa8.89□□□□□ -0.99
COL4A5-201ENST00000328300 COL5A1P20908 1838 aaPredicted RBP8.89□□□□□ -0.99
COL4A5-201ENST00000328300 C9orf47Q6ZRZ4 202 aa8.89□□□□□ -0.99
COL4A5-201ENST00000328300 EDA2RQ9HAV5 297 aa8.89□□□□□ -0.99
COL4A5-201ENST00000328300 SMKR1H3BMG3 65 aa8.88□□□□□ -0.99
COL4A5-201ENST00000328300 HERVK_113P63121 156 aa8.88□□□□□ -0.99
COL4A5-201ENST00000328300 EBI3Q14213 229 aa8.88□□□□□ -0.99
COL4A5-201ENST00000328300 GATD1Q8NB37 220 aa8.88□□□□□ -0.99
COL4A5-201ENST00000328300 INTS1Q8N201 2190 aaKnown RBP8.88□□□□□ -0.99
COL4A5-201ENST00000328300 TP53BP1Q12888 1972 aaPredicted RBP8.88□□□□□ -0.99
COL4A5-201ENST00000328300 C11orf71Q6IPW1 123 aa8.88□□□□□ -0.99
COL4A5-201ENST00000328300 PRIMA1Q86XR5 153 aa8.88□□□□□ -0.99
COL4A5-201ENST00000328300 SPANXA1Q9NS26 97 aa8.88□□□□□ -0.99
COL4A5-201ENST00000328300 MPDZO75970 2070 aa8.88□□□□□ -0.99
COL4A5-201ENST00000328300 GAGE7O76087 117 aa8.88□□□□□ -0.99
COL4A5-201ENST00000328300 NPSP0C0P6 89 aa8.88□□□□□ -0.99
COL4A5-201ENST00000328300 GAGE12FP0CL80 117 aa8.88□□□□□ -0.99
COL4A5-201ENST00000328300 GAGE12GP0CL81 117 aa8.88□□□□□ -0.99
COL4A5-201ENST00000328300 GAGE12IP0CL82 117 aa8.88□□□□□ -0.99
COL4A5-201ENST00000328300 KLF12Q9Y4X4 402 aa8.88□□□□□ -0.99
COL4A5-201ENST00000328300 ADAMTS9Q9P2N4 1935 aa8.87□□□□□ -0.99
COL4A5-201ENST00000328300 IGF1P05019 195 aa8.87□□□□□ -0.99
COL4A5-201ENST00000328300 PAX4O43316 350 aa8.87□□□□□ -0.99
COL4A5-201ENST00000328300 STPG4Q8N801 248 aa8.87□□□□□ -0.99
COL4A5-201ENST00000328300 CACNA1BQ00975 2339 aa8.87□□□□□ -0.99
COL4A5-201ENST00000328300 C9JAW5 83 aa8.87□□□□□ -0.99
COL4A5-201ENST00000328300 HLA-DRB4P13762 266 aa8.87□□□□□ -0.99
COL4A5-201ENST00000328300 TAL2Q16559 108 aa8.87□□□□□ -0.99
COL4A5-201ENST00000328300 ZNRF2Q8NHG8 242 aa8.87□□□□□ -0.99
COL4A5-201ENST00000328300 C11orf1Q9H5F2 150 aa8.87□□□□□ -0.99
COL4A5-201ENST00000328300 HLA-DRB4X5D2U9 266 aa8.87□□□□□ -0.99
COL4A5-201ENST00000328300 TRAV13-1A0A0B4J241 112 aa8.87□□□□□ -0.99
COL4A5-201ENST00000328300 IGLC2P0DOY2 106 aa8.87□□□□□ -0.99
COL4A5-201ENST00000328300 IGLC3P0DOY3 106 aa8.87□□□□□ -0.99
COL4A5-201ENST00000328300 TRAV8-3A0A0A6YYJ7 113 aa8.86□□□□□ -0.99
COL4A5-201ENST00000328300 C2orf70A6NJV1 201 aa8.86□□□□□ -0.99
COL4A5-201ENST00000328300 BLCAPP62952 87 aa8.86□□□□□ -0.99
COL4A5-201ENST00000328300 PATE2Q6UY27 113 aa8.86□□□□□ -0.99
COL4A5-201ENST00000328300 ODF3Q96PU9 254 aa8.86□□□□□ -0.99
COL4A5-201ENST00000328300 LGALS9O00182 355 aa8.86□□□□□ -0.99
COL4A5-201ENST00000328300 C9orf118A6NHY6 69 aa8.86□□□□□ -0.99
COL4A5-201ENST00000328300 ZNF561-AS1K7EIQ3 104 aa8.86□□□□□ -0.99
COL4A5-201ENST00000328300 TRAV12-2A0A075B6T6 113 aa8.85□□□□□ -0.99
COL4A5-201ENST00000328300 Q6YL49 198 aa8.85□□□□□ -0.99
COL4A5-201ENST00000328300 SIGLEC8Q9NYZ4 499 aa8.85□□□□□ -0.99
COL4A5-201ENST00000328300 PTPRSQ13332 1948 aa8.85□□□□□ -0.99
COL4A5-201ENST00000328300 IGHG4P01861 327 aa8.85□□□□□ -0.99
COL4A5-201ENST00000328300 RITA1Q96K30 269 aa8.85□□□□□ -0.99
COL4A5-201ENST00000328300 IGF2BP2-AS1Q96M15 143 aa8.85□□□□□ -0.99
COL4A5-201ENST00000328300 FAM167A-AS1Q96KT0 104 aa8.85□□□□□ -0.99
COL4A5-201ENST00000328300 NDUFA11Q86Y39 141 aa8.85□□□□□ -0.99
COL4A5-201ENST00000328300 SLURP1P55000 103 aa8.84□□□□□ -0.99
COL4A5-201ENST00000328300 Q6ZWC4 215 aa8.84□□□□□ -0.99
COL4A5-201ENST00000328300 DEFB104AQ8WTQ1 72 aa8.84□□□□□ -0.99
COL4A5-201ENST00000328300 F8VRH5 84 aa8.84□□□□□ -0.99
COL4A5-201ENST00000328300 K7EN84 100 aa8.84□□□□□ -0.99
COL4A5-201ENST00000328300 IGHV4OR15-8A0A075B7B6 117 aa8.84□□□□□ -0.99
COL4A5-201ENST00000328300 A0A087WW49 117 aa8.84□□□□□ -0.99
COL4A5-201ENST00000328300 EGR2P11161 476 aaPredicted RBP8.84□□□□□ -0.99
COL4A5-201ENST00000328300 LINC01545Q5VT33 79 aa8.84□□□□□ -0.99
COL4A5-201ENST00000328300 SIVA1O15304 175 aa8.84□□□□□ -0.99
COL4A5-201ENST00000328300 NPYP01303 97 aa8.84□□□□□ -1
COL4A5-201ENST00000328300 SPART-AS1P0CW21 52 aa8.83□□□□□ -1
COL4A5-201ENST00000328300 GAGE2AQ6NT46 116 aa8.83□□□□□ -1
COL4A5-201ENST00000328300 CFHR4Q92496 578 aa8.83□□□□□ -1
COL4A5-201ENST00000328300 LAMTOR3Q9UHA4 124 aa8.83□□□□□ -1
COL4A5-201ENST00000328300 IGHV4-31P0DP07 118 aa8.83□□□□□ -1
COL4A5-201ENST00000328300 C9orf153Q5TBE3 101 aa8.83□□□□□ -1
COL4A5-201ENST00000328300 ZNF318Q5VUA4 2279 aa8.83□□□□□ -1
COL4A5-201ENST00000328300 F8WEM9 126 aa8.83□□□□□ -1
COL4A5-201ENST00000328300 C17orf77Q96MU5 243 aa8.83□□□□□ -1
COL4A5-201ENST00000328300 U3KQE9 123 aa8.83□□□□□ -1
COL4A5-201ENST00000328300 K7EP13 123 aa8.83□□□□□ -1
COL4A5-201ENST00000328300 ATP5G1P05496 136 aa8.83□□□□□ -1
COL4A5-201ENST00000328300 DAZ2Q13117 558 aaKnown RBP8.83□□□□□ -1
COL4A5-201ENST00000328300 EIF4EBP1Q13541 118 aaPredicted RBP8.83□□□□□ -1
COL4A5-201ENST00000328300 DAZ4Q86SG3 579 aaKnown RBP8.83□□□□□ -1
COL4A5-201ENST00000328300 DAZ3Q9NR90 486 aaKnown RBP8.83□□□□□ -1
COL4A5-201ENST00000328300 K7EP34 96 aa8.82□□□□□ -1
COL4A5-201ENST00000328300 WISP2O76076 250 aa8.82□□□□□ -1
COL4A5-201ENST00000328300 ZNF843Q8N446 348 aa8.82□□□□□ -1
COL4A5-201ENST00000328300 SPTBN2O15020 2390 aa8.82□□□□□ -1
COL4A5-201ENST00000328300 FANCD2OSQ96PS1 177 aa8.82□□□□□ -1
COL4A5-201ENST00000328300 LY6LH3BQJ8 138 aa8.82□□□□□ -1
COL4A5-201ENST00000328300 C19orf84I3L1E1 186 aa8.82□□□□□ -1
COL4A5-201ENST00000328300 TRBV20-1A0A075B6N2 111 aa8.82□□□□□ -1
COL4A5-201ENST00000328300 F8W1H4 67 aa8.82□□□□□ -1
COL4A5-201ENST00000328300 MRPL23Q16540 153 aaKnown RBP8.82□□□□□ -1
COL4A5-201ENST00000328300 COL6A6A6NMZ7 2263 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms