RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ZNF705DP0CH99 300 aaPredicted RBP13.95□□□□□ -0.18
EXOSC3-201ENST00000327304 ZNF705BP0CI00 300 aaPredicted RBP13.95□□□□□ -0.18
EXOSC3-201ENST00000327304 OR10J3Q5JRS4 329 aa13.95□□□□□ -0.18
EXOSC3-201ENST00000327304 OR4C46A6NHA9 309 aa13.94□□□□□ -0.18
EXOSC3-201ENST00000327304 ORM1P02763 201 aa13.94□□□□□ -0.18
EXOSC3-201ENST00000327304 DEFB1P60022 68 aa13.94□□□□□ -0.18
EXOSC3-201ENST00000327304 SNRPD3P62318 126 aaKnown RBP13.94□□□□□ -0.18
EXOSC3-201ENST00000327304 PDZD11Q5EBL8 140 aa13.94□□□□□ -0.18
EXOSC3-201ENST00000327304 PRR31Q5SQ13 230 aa13.94□□□□□ -0.18
EXOSC3-201ENST00000327304 TMSB15BA0A087X1C1 80 aa13.94□□□□□ -0.18
EXOSC3-201ENST00000327304 GRIFINA4D1Z8 144 aa13.94□□□□□ -0.18
EXOSC3-201ENST00000327304 ARMS2P0C7Q2 107 aa13.94□□□□□ -0.18
EXOSC3-201ENST00000327304 IGLC6P0CF74 106 aa13.94□□□□□ -0.18
EXOSC3-201ENST00000327304 KRTAP21-3Q3LHN1 58 aa13.94□□□□□ -0.18
EXOSC3-201ENST00000327304 KIAA1644Q3SXP7 199 aa13.94□□□□□ -0.18
EXOSC3-201ENST00000327304 PSMG4Q5JS54 123 aa13.94□□□□□ -0.18
EXOSC3-201ENST00000327304 ZNF575Q86XF7 245 aa13.94□□□□□ -0.18
EXOSC3-201ENST00000327304 CTRLP40313 264 aa13.93□□□□□ -0.18
EXOSC3-201ENST00000327304 LYZL1Q6UWQ5 148 aa13.93□□□□□ -0.18
EXOSC3-201ENST00000327304 APRG1Q8IVJ8 170 aa13.93□□□□□ -0.18
EXOSC3-201ENST00000327304 ZFAND2AQ8N6M9 145 aa13.93□□□□□ -0.18
EXOSC3-201ENST00000327304 HIST1H2BLQ99880 126 aa13.93□□□□□ -0.18
EXOSC3-201ENST00000327304 SMIM6P0DI80 62 aa13.92□□□□□ -0.18
EXOSC3-201ENST00000327304 SRIP30626 198 aa13.92□□□□□ -0.18
EXOSC3-201ENST00000327304 FER1L6-AS1Q8NA97 138 aa13.92□□□□□ -0.18
EXOSC3-201ENST00000327304 SSBP4Q9BWG4 385 aaPredicted RBP13.92□□□□□ -0.18
EXOSC3-201ENST00000327304 F6UB75 175 aa13.92□□□□□ -0.18
EXOSC3-201ENST00000327304 WIPF1O43516 503 aa13.92□□□□□ -0.18
EXOSC3-201ENST00000327304 ESDP10768 282 aa13.92□□□□□ -0.18
EXOSC3-201ENST00000327304 OXLD1Q5BKU9 147 aa13.92□□□□□ -0.18
EXOSC3-201ENST00000327304 TP53TG3Q9ULZ0 132 aa13.92□□□□□ -0.18
EXOSC3-201ENST00000327304 IGKV3D-20A0A0C4DH25 116 aa13.91□□□□□ -0.18
EXOSC3-201ENST00000327304 FABP4P15090 132 aa13.91□□□□□ -0.18
EXOSC3-201ENST00000327304 BEAN1Q3B7T3 259 aa13.91□□□□□ -0.18
EXOSC3-201ENST00000327304 TPPP3Q9BW30 176 aa13.91□□□□□ -0.18
EXOSC3-201ENST00000327304 MAP6D1Q9H9H5 199 aa13.91□□□□□ -0.18
EXOSC3-201ENST00000327304 TRAV21A0A0B4J279 112 aa13.9□□□□□ -0.18
EXOSC3-201ENST00000327304 F2Z2F3 143 aa13.9□□□□□ -0.18
EXOSC3-201ENST00000327304 DEFB131AP59861 70 aa13.9□□□□□ -0.18
EXOSC3-201ENST00000327304 ODF3L2Q3SX64 289 aa13.9□□□□□ -0.18
EXOSC3-201ENST00000327304 ZNF493Q6ZR52 646 aa13.9□□□□□ -0.18
EXOSC3-201ENST00000327304 BAGE3Q86Y29 109 aa13.9□□□□□ -0.18
EXOSC3-201ENST00000327304 TMEM256Q8N2U0 113 aa13.9□□□□□ -0.18
EXOSC3-201ENST00000327304 TMEM18Q96B42 140 aa13.9□□□□□ -0.18
EXOSC3-201ENST00000327304 ODF3Q96PU9 254 aa13.9□□□□□ -0.18
EXOSC3-201ENST00000327304 CNFNQ9BYD5 112 aa13.9□□□□□ -0.18
EXOSC3-201ENST00000327304 AMBPP02760 352 aa13.9□□□□□ -0.18
EXOSC3-201ENST00000327304 PRR9Q5T870 116 aa13.9□□□□□ -0.18
EXOSC3-201ENST00000327304 ALKBH7Q9BT30 221 aaPredicted RBP13.9□□□□□ -0.18
EXOSC3-201ENST00000327304 C11orf21Q9P2W6 132 aa13.9□□□□□ -0.18
EXOSC3-201ENST00000327304 GPX1P07203 203 aa13.89□□□□□ -0.19
EXOSC3-201ENST00000327304 OR10D4PQ8NGN7 298 aa13.89□□□□□ -0.19
EXOSC3-201ENST00000327304 PACRGQ96M98 296 aaPredicted RBP13.89□□□□□ -0.19
EXOSC3-201ENST00000327304 LOC102724200A0A096LPH7 203 aaPredicted RBP13.88□□□□□ -0.19
EXOSC3-201ENST00000327304 A0A0J9YX75 114 aa13.88□□□□□ -0.19
EXOSC3-201ENST00000327304 CD7P09564 240 aa13.88□□□□□ -0.19
EXOSC3-201ENST00000327304 ZNF124Q15973 351 aa13.88□□□□□ -0.19
EXOSC3-201ENST00000327304 C12orf57Q99622 126 aa13.88□□□□□ -0.19
EXOSC3-201ENST00000327304 LINC00310P59036 64 aa13.87□□□□□ -0.19
EXOSC3-201ENST00000327304 EBLN2Q6P2I7 272 aa13.87□□□□□ -0.19
EXOSC3-201ENST00000327304 C18orf32Q8TCD1 76 aa13.87□□□□□ -0.19
EXOSC3-201ENST00000327304 DNHD1Q96M86 4753 aa13.87□□□□□ -0.19
EXOSC3-201ENST00000327304 KLLNB2CW77 178 aa13.87□□□□□ -0.19
EXOSC3-201ENST00000327304 NUPR1O60356 82 aa13.87□□□□□ -0.19
EXOSC3-201ENST00000327304 SERF1AO75920 110 aa13.87□□□□□ -0.19
EXOSC3-201ENST00000327304 DUSP14O95147 198 aaKnown RBP13.86□□□□□ -0.19
EXOSC3-201ENST00000327304 KNCNA6PVL3 124 aa13.85□□□□□ -0.19
EXOSC3-201ENST00000327304 OR11H12B2RN74 326 aa13.85□□□□□ -0.19
EXOSC3-201ENST00000327304 LEPP41159 167 aa13.85□□□□□ -0.19
EXOSC3-201ENST00000327304 FOXI2Q6ZQN5 318 aa13.85□□□□□ -0.19
EXOSC3-201ENST00000327304 WFDC10AQ9H1F0 79 aa13.85□□□□□ -0.19
EXOSC3-201ENST00000327304 C19orf73Q9NVV2 129 aa13.85□□□□□ -0.19
EXOSC3-201ENST00000327304 G3V4G9 280 aa13.85□□□□□ -0.19
EXOSC3-201ENST00000327304 OR5AL1P0C617 328 aa13.84□□□□□ -0.19
EXOSC3-201ENST00000327304 NTF3P20783 257 aa13.84□□□□□ -0.19
EXOSC3-201ENST00000327304 RNASE4P34096 147 aaKnown RBP13.84□□□□□ -0.19
EXOSC3-201ENST00000327304 MGAM2Q2M2H8 2515 aa13.84□□□□□ -0.19
EXOSC3-201ENST00000327304 J3KRW8 73 aa13.83□□□□□ -0.2
EXOSC3-201ENST00000327304 SNAI2O43623 268 aa13.83□□□□□ -0.2
EXOSC3-201ENST00000327304 KRTAP10-11P60412 298 aa13.83□□□□□ -0.2
EXOSC3-201ENST00000327304 TWIST1Q15672 202 aa13.83□□□□□ -0.2
EXOSC3-201ENST00000327304 Q6ZQT7 251 aa13.83□□□□□ -0.2
EXOSC3-201ENST00000327304 AGRNO00468 2067 aa13.83□□□□□ -0.2
EXOSC3-201ENST00000327304 SAMD5Q5TGI4 173 aa13.83□□□□□ -0.2
EXOSC3-201ENST00000327304 FAM104BQ5XKR9 115 aa13.83□□□□□ -0.2
EXOSC3-201ENST00000327304 KCNS1Q96KK3 526 aa13.83□□□□□ -0.2
EXOSC3-201ENST00000327304 TMEM191AQ9H0A3 160 aa13.83□□□□□ -0.2
EXOSC3-201ENST00000327304 CMC4P56277 68 aaPredicted RBP13.82□□□□□ -0.2
EXOSC3-201ENST00000327304 EGFEM1PQ0D2K5 195 aa13.82□□□□□ -0.2
EXOSC3-201ENST00000327304 PYY3Q5JQD4 70 aa13.82□□□□□ -0.2
EXOSC3-201ENST00000327304 GTSCR1Q86UQ5 136 aa13.82□□□□□ -0.2
EXOSC3-201ENST00000327304 RCHY1Q96PM5 261 aa13.82□□□□□ -0.2
EXOSC3-201ENST00000327304 FAM110AQ9BQ89 295 aa13.82□□□□□ -0.2
EXOSC3-201ENST00000327304 IGHV4-4A0A075B6R2 117 aa13.81□□□□□ -0.2
EXOSC3-201ENST00000327304 MED14OSP0DP75 135 aa13.81□□□□□ -0.2
EXOSC3-201ENST00000327304 TSPOP30536 169 aa13.81□□□□□ -0.2
EXOSC3-201ENST00000327304 CACNG7P62955 275 aa13.81□□□□□ -0.2
EXOSC3-201ENST00000327304 DNLZQ5SXM8 178 aa13.81□□□□□ -0.2
EXOSC3-201ENST00000327304 DMRTA1Q5VZB9 504 aa13.81□□□□□ -0.2
EXOSC3-201ENST00000327304 NOTCH1P46531 2555 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms