RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 A0A0G2JLM5 398 aa15.15■□□□□ 0.02
SOX2-201ENST00000325404 K7EP34 96 aa15.15■□□□□ 0.02
SOX2-201ENST00000325404 NDUFS8O00217 210 aa15.15■□□□□ 0.02
SOX2-201ENST00000325404 CLEC2AQ6UVW9 174 aa15.15■□□□□ 0.02
SOX2-201ENST00000325404 FOXC2Q99958 501 aa15.15■□□□□ 0.02
SOX2-201ENST00000325404 IGHV3OR16-13A0A075B7E8 117 aa15.15■□□□□ 0.02
SOX2-201ENST00000325404 IGHV3-74A0A0B4J1X5 117 aa15.15■□□□□ 0.02
SOX2-201ENST00000325404 SPANXN1Q5VSR9 72 aa15.15■□□□□ 0.02
SOX2-201ENST00000325404 C10orf105Q8TEF2 133 aa15.15■□□□□ 0.02
SOX2-201ENST00000325404 FAM208BQ5VWN6 2430 aa15.14■□□□□ 0.01
SOX2-201ENST00000325404 OVOL1O14753 267 aa15.14■□□□□ 0.01
SOX2-201ENST00000325404 K7EMI3 77 aa15.14■□□□□ 0.01
SOX2-201ENST00000325404 K7ERU9 68 aa15.14■□□□□ 0.01
SOX2-201ENST00000325404 NDUFA4O00483 81 aa15.14■□□□□ 0.01
SOX2-201ENST00000325404 ZNF207O43670 478 aaKnown RBP15.14■□□□□ 0.01
SOX2-201ENST00000325404 IGKV2D-26A0A0A0MRZ7 120 aa15.13■□□□□ 0.01
SOX2-201ENST00000325404 H3BUA1 57 aa15.13■□□□□ 0.01
SOX2-201ENST00000325404 LRRK2Q5S007 2527 aa15.13■□□□□ 0.01
SOX2-201ENST00000325404 IGHV3-49A0A0A0MS15 119 aa15.13■□□□□ 0.01
SOX2-201ENST00000325404 H3BUT2 72 aa15.13■□□□□ 0.01
SOX2-201ENST00000325404 IGF1P05019 195 aa15.13■□□□□ 0.01
SOX2-201ENST00000325404 MED14OSP0DP75 135 aa15.13■□□□□ 0.01
SOX2-201ENST00000325404 COX6B1P14854 86 aa15.13■□□□□ 0.01
SOX2-201ENST00000325404 JMJD8Q96S16 334 aa15.13■□□□□ 0.01
SOX2-201ENST00000325404 MEGF9Q9H1U4 602 aa15.13■□□□□ 0.01
SOX2-201ENST00000325404 A0A087WX48 190 aa15.12■□□□□ 0.01
SOX2-201ENST00000325404 IGHV4-61A0A0C4DH41 118 aa15.12■□□□□ 0.01
SOX2-201ENST00000325404 ARL3P36405 182 aa15.12■□□□□ 0.01
SOX2-201ENST00000325404 OR5A1Q8NGJ0 315 aa15.12■□□□□ 0.01
SOX2-201ENST00000325404 TRBV7-9A0A0J9YWB2 115 aa15.12■□□□□ 0.01
SOX2-201ENST00000325404 SMIM13P0DJ93 91 aa15.12■□□□□ 0.01
SOX2-201ENST00000325404 UFC1Q9Y3C8 167 aa15.12■□□□□ 0.01
SOX2-201ENST00000325404 ASH1LQ9NR48 2969 aaKnown RBP15.11■□□□□ 0.01
SOX2-201ENST00000325404 TRAV12-1A0A0B4J245 112 aa15.11■□□□□ 0.01
SOX2-201ENST00000325404 TRAV21A0A0B4J279 112 aa15.11■□□□□ 0.01
SOX2-201ENST00000325404 IGHV1-69DA0A0B4J2H0 117 aa15.11■□□□□ 0.01
SOX2-201ENST00000325404 A0A1W2PPM0 123 aa15.11■□□□□ 0.01
SOX2-201ENST00000325404 SOCS3O14543 225 aa15.11■□□□□ 0.01
SOX2-201ENST00000325404 UBR5O95071 2799 aaPredicted RBP15.11■□□□□ 0.01
SOX2-201ENST00000325404 IGHV1-69P01742 117 aa15.11■□□□□ 0.01
SOX2-201ENST00000325404 ZC2HC1BQ5TFG8 222 aa15.11■□□□□ 0.01
SOX2-201ENST00000325404 USMG5Q96IX5 58 aa15.11■□□□□ 0.01
SOX2-201ENST00000325404 C20orf173Q96LM9 149 aa15.11■□□□□ 0.01
SOX2-201ENST00000325404 C20orf78Q9BR46 151 aa15.11■□□□□ 0.01
SOX2-201ENST00000325404 TM2D2Q9BX73 214 aa15.11■□□□□ 0.01
SOX2-201ENST00000325404 SLC25A16P16260 332 aa15.1■□□□□ 0.01
SOX2-201ENST00000325404 PLNP26678 52 aa15.1■□□□□ 0.01
SOX2-201ENST00000325404 TCTAP57738 103 aa15.1■□□□□ 0.01
SOX2-201ENST00000325404 ZFAND2AQ8N6M9 145 aa15.1■□□□□ 0.01
SOX2-201ENST00000325404 OR10J6PQ8NGY7 276 aa15.1■□□□□ 0.01
SOX2-201ENST00000325404 CHAC1Q9BUX1 264 aa15.1■□□□□ 0.01
SOX2-201ENST00000325404 SMIM2Q9BVW6 85 aa15.1■□□□□ 0.01
SOX2-201ENST00000325404 TAL2Q16559 108 aa15.1■□□□□ 0.01
SOX2-201ENST00000325404 ORMDL2Q53FV1 153 aa15.1■□□□□ 0.01
SOX2-201ENST00000325404 PRR9Q5T870 116 aa15.1■□□□□ 0.01
SOX2-201ENST00000325404 TRBV25-1A0A075B6N4 114 aa15.09■□□□□ 0.01
SOX2-201ENST00000325404 TMEM238LA0A1B0GVL6 79 aa15.09■□□□□ 0.01
SOX2-201ENST00000325404 H3BVH4 76 aa15.09■□□□□ 0.01
SOX2-201ENST00000325404 RNF151Q2KHN1 245 aa15.09■□□□□ 0.01
SOX2-201ENST00000325404 GPHB5Q86YW7 130 aa15.09■□□□□ 0.01
SOX2-201ENST00000325404 APRG1Q8IVJ8 170 aa15.09■□□□□ 0.01
SOX2-201ENST00000325404 FAM19A4Q96LR4 140 aa15.09■□□□□ 0.01
SOX2-201ENST00000325404 TMEM219Q86XT9 240 aa15.09■□□□□ 0.01
SOX2-201ENST00000325404 MRPL35Q9NZE8 188 aaKnown RBP15.09■□□□□ 0.01
SOX2-201ENST00000325404 IGHV4-30-2A0A087WSY4 118 aa15.08■□□□□ 0.01
SOX2-201ENST00000325404 GTSCR1Q86UQ5 136 aa15.08■□□□□ 0.01
SOX2-201ENST00000325404 TRAV26-2A0A0B4J265 109 aa15.08■□□□□ 0
SOX2-201ENST00000325404 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.08■□□□□ 0
SOX2-201ENST00000325404 M0R381 172 aa15.08■□□□□ 0
SOX2-201ENST00000325404 TRAV40A0A0B4J280 105 aa15.07■□□□□ 0
SOX2-201ENST00000325404 NRGNQ92686 78 aa15.07■□□□□ 0
SOX2-201ENST00000325404 TMEM160Q9NX00 188 aa15.07■□□□□ 0
SOX2-201ENST00000325404 FABP2P12104 132 aa15.07■□□□□ 0
SOX2-201ENST00000325404 DPH3P1Q9H4G8 78 aa15.07■□□□□ 0
SOX2-201ENST00000325404 H7C1H1 209 aa15.06■□□□□ 0
SOX2-201ENST00000325404 PPP1R17O96001 155 aa15.06■□□□□ 0
SOX2-201ENST00000325404 ASIPP42127 132 aa15.06■□□□□ 0
SOX2-201ENST00000325404 Q6ZQT7 251 aa15.06■□□□□ 0
SOX2-201ENST00000325404 IGHG2P01859 326 aa15.06■□□□□ 0
SOX2-201ENST00000325404 GCSHP23434 173 aa15.06■□□□□ 0
SOX2-201ENST00000325404 CEND1Q8N111 149 aa15.06■□□□□ 0
SOX2-201ENST00000325404 TOMM6Q96B49 74 aa15.06■□□□□ 0
SOX2-201ENST00000325404 ABCA2Q9BZC7 2435 aa15.05■□□□□ 0
SOX2-201ENST00000325404 LINC01619G3V211 115 aa15.05■□□□□ 0
SOX2-201ENST00000325404 FXYD2P54710 66 aa15.05■□□□□ 0
SOX2-201ENST00000325404 DSCR9P59020 149 aa15.05■□□□□ 0
SOX2-201ENST00000325404 SUMO2P61956 95 aaKnown RBP15.05■□□□□ 0
SOX2-201ENST00000325404 UNQ9165/PRO28630Q6UXU0 137 aa15.05■□□□□ 0
SOX2-201ENST00000325404 VPS25Q9BRG1 176 aa15.05■□□□□ 0
SOX2-201ENST00000325404 SPCS1Q9Y6A9 102 aa15.05■□□□□ 0
SOX2-201ENST00000325404 UTP20O75691 2785 aaKnown RBP15.05■□□□□ -0
SOX2-201ENST00000325404 SAMD5Q5TGI4 173 aa15.05■□□□□ -0
SOX2-201ENST00000325404 RAB37Q96AX2 223 aa15.05■□□□□ -0
SOX2-201ENST00000325404 F8VRH5 84 aa15.04■□□□□ -0
SOX2-201ENST00000325404 POM121L12Q8N7R1 296 aa15.04■□□□□ -0
SOX2-201ENST00000325404 PHLDA1Q8WV24 401 aaPredicted RBP15.04■□□□□ -0
SOX2-201ENST00000325404 RASL10AQ92737 203 aa15.04■□□□□ -0
SOX2-201ENST00000325404 NEGR1Q7Z3B1 354 aa15.03■□□□□ -0
SOX2-201ENST00000325404 CHTOPQ9Y3Y2 248 aaKnown RBP15.03■□□□□ -0
SOX2-201ENST00000325404 S100A4P26447 101 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms